RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 IGHV1OR15-1A0A075B7D0 117 aa11.34□□□□□ -0.59
ABCD4-218ENST00000553486 CD28P10747 220 aa11.34□□□□□ -0.59
ABCD4-218ENST00000553486 FXYD7P58549 80 aa11.34□□□□□ -0.59
ABCD4-218ENST00000553486 AMTNQ6UX39 209 aa11.34□□□□□ -0.59
ABCD4-218ENST00000553486 IFI27L1Q96BM0 104 aa11.34□□□□□ -0.59
ABCD4-218ENST00000553486 ST20Q9HBF5 79 aa11.34□□□□□ -0.59
ABCD4-218ENST00000553486 TSSC4Q9Y5U2 329 aaPredicted RBP11.34□□□□□ -0.59
ABCD4-218ENST00000553486 SORL1Q92673 2214 aa11.33□□□□□ -0.6
ABCD4-218ENST00000553486 PPP1R17O96001 155 aa11.33□□□□□ -0.6
ABCD4-218ENST00000553486 SMIM17P0DL12 118 aa11.33□□□□□ -0.6
ABCD4-218ENST00000553486 HLA-DRB4P13762 266 aa11.33□□□□□ -0.6
ABCD4-218ENST00000553486 LINC01006Q8NI28 216 aa11.33□□□□□ -0.6
ABCD4-218ENST00000553486 C2orf88Q9BSF0 95 aa11.33□□□□□ -0.6
ABCD4-218ENST00000553486 HLA-DRB4X5D2U9 266 aa11.33□□□□□ -0.6
ABCD4-218ENST00000553486 TRAV25A0A0B4J276 109 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 IGHV3-16A0A0C4DH30 117 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 KNCNA6PVL3 124 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 A8MTW9 85 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 CCL24O00175 119 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 MGPP08493 103 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 FHL3Q13643 280 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 LGALS9BQ3B8N2 356 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 LGALS9CQ6DKI2 356 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 C11orf44Q8N8P7 122 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 C20orf78Q9BR46 151 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 A0A1W2PRX2 142 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 LAGE3Q14657 143 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 Q6ZN92 141 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 POM121L12Q8N7R1 296 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 SYT8Q8NBV8 401 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 C9orf85Q96MD7 179 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 SPAG8Q99932 426 aaPredicted RBP11.32□□□□□ -0.6
ABCD4-218ENST00000553486 MCRIP2Q9BUT9 160 aaKnown RBP11.32□□□□□ -0.6
ABCD4-218ENST00000553486 SNHG12Q9BXW3 62 aa11.32□□□□□ -0.6
ABCD4-218ENST00000553486 H3BMM0 161 aa11.31□□□□□ -0.6
ABCD4-218ENST00000553486 KRTAP10-3P60369 221 aa11.31□□□□□ -0.6
ABCD4-218ENST00000553486 HIST2H2BDQ6DRA6 164 aa11.31□□□□□ -0.6
ABCD4-218ENST00000553486 RASL10AQ92737 203 aa11.31□□□□□ -0.6
ABCD4-218ENST00000553486 SMIM2Q9BVW6 85 aa11.31□□□□□ -0.6
ABCD4-218ENST00000553486 TRGV11A0A075B6L2 103 aa11.3□□□□□ -0.6
ABCD4-218ENST00000553486 EREGO14944 169 aa11.3□□□□□ -0.6
ABCD4-218ENST00000553486 HNRNPA3P51991 378 aaKnown RBP11.3□□□□□ -0.6
ABCD4-218ENST00000553486 PROK1P58294 105 aa11.3□□□□□ -0.6
ABCD4-218ENST00000553486 CD300EQ496F6 205 aaPredicted RBP11.3□□□□□ -0.6
ABCD4-218ENST00000553486 Q8N1Y9 231 aa11.3□□□□□ -0.6
ABCD4-218ENST00000553486 CITED2Q99967 270 aaPredicted RBP11.3□□□□□ -0.6
ABCD4-218ENST00000553486 MAP6D1Q9H9H5 199 aa11.3□□□□□ -0.6
ABCD4-218ENST00000553486 GOLT1BQ9Y3E0 138 aa11.3□□□□□ -0.6
ABCD4-218ENST00000553486 hDV102S1A0JD36 115 aa11.3□□□□□ -0.6
ABCD4-218ENST00000553486 SUMO2P61956 95 aaKnown RBP11.3□□□□□ -0.6
ABCD4-218ENST00000553486 PMCHL2Q9BQD1 86 aa11.3□□□□□ -0.6
ABCD4-218ENST00000553486 KIF25-AS1Q9Y6Z4 181 aa11.3□□□□□ -0.6
ABCD4-218ENST00000553486 K7EMI3 77 aa11.29□□□□□ -0.6
ABCD4-218ENST00000553486 MDFICQ9P1T7 246 aa11.29□□□□□ -0.6
ABCD4-218ENST00000553486 ATP5LO75964 103 aa11.28□□□□□ -0.6
ABCD4-218ENST00000553486 TCAPO15273 167 aa11.28□□□□□ -0.6
ABCD4-218ENST00000553486 LINC00315P59091 139 aa11.28□□□□□ -0.6
ABCD4-218ENST00000553486 ORMDL2Q53FV1 153 aa11.28□□□□□ -0.6
ABCD4-218ENST00000553486 RPL39LQ96EH5 51 aaKnown RBP11.28□□□□□ -0.6
ABCD4-218ENST00000553486 C18orf15Q96N68 181 aa11.28□□□□□ -0.6
ABCD4-218ENST00000553486 ZNF256Q9Y2P7 627 aaPredicted RBP11.28□□□□□ -0.6
ABCD4-218ENST00000553486 CBY3A6NI87 242 aa11.27□□□□□ -0.61
ABCD4-218ENST00000553486 MRPS16Q9Y3D3 137 aaKnown RBP11.27□□□□□ -0.61
ABCD4-218ENST00000553486 NUDT3O95989 172 aa11.26□□□□□ -0.61
ABCD4-218ENST00000553486 JPT2Q9H910 190 aa11.26□□□□□ -0.61
ABCD4-218ENST00000553486 RBMY1BA6NDE4 496 aaKnown RBP11.25□□□□□ -0.61
ABCD4-218ENST00000553486 RBMY1EA6NEQ0 496 aaKnown RBP11.25□□□□□ -0.61
ABCD4-218ENST00000553486 PRSS1P07477 247 aa11.25□□□□□ -0.61
ABCD4-218ENST00000553486 RBMY1DP0C7P1 496 aaKnown RBP11.25□□□□□ -0.61
ABCD4-218ENST00000553486 ZNF124Q15973 351 aa11.25□□□□□ -0.61
ABCD4-218ENST00000553486 CLUHP3Q96NS8 147 aa11.25□□□□□ -0.61
ABCD4-218ENST00000553486 F5H697 171 aa11.25□□□□□ -0.61
ABCD4-218ENST00000553486 RPL32P62910 135 aaKnown RBP11.25□□□□□ -0.61
ABCD4-218ENST00000553486 SLC25A34Q6PIV7 304 aa11.25□□□□□ -0.61
ABCD4-218ENST00000553486 A0A087WWL8 130 aa11.24□□□□□ -0.61
ABCD4-218ENST00000553486 RBMY1A1P0DJD3 496 aaKnown RBP11.24□□□□□ -0.61
ABCD4-218ENST00000553486 RBMY1CP0DJD4 496 aa11.24□□□□□ -0.61
ABCD4-218ENST00000553486 RBMY1FQ15415 496 aaKnown RBP11.24□□□□□ -0.61
ABCD4-218ENST00000553486 SUMO4Q6EEV6 95 aa11.24□□□□□ -0.61
ABCD4-218ENST00000553486 A0A1B0GV90 55 aa11.23□□□□□ -0.61
ABCD4-218ENST00000553486 CMC4P56277 68 aaPredicted RBP11.23□□□□□ -0.61
ABCD4-218ENST00000553486 CSTL1Q9H114 145 aa11.23□□□□□ -0.61
ABCD4-218ENST00000553486 G0S2P27469 103 aa11.23□□□□□ -0.61
ABCD4-218ENST00000553486 ZNF876PQ49A33 203 aa11.23□□□□□ -0.61
ABCD4-218ENST00000553486 OR11H12B2RN74 326 aa11.22□□□□□ -0.61
ABCD4-218ENST00000553486 ODF1Q14990 250 aa11.22□□□□□ -0.61
ABCD4-218ENST00000553486 FAM74A4Q5TZK3 123 aa11.22□□□□□ -0.61
ABCD4-218ENST00000553486 TOMM6Q96B49 74 aa11.22□□□□□ -0.61
ABCD4-218ENST00000553486 LINC00467Q9BRT7 94 aa11.22□□□□□ -0.61
ABCD4-218ENST00000553486 INSP01308 110 aa11.21□□□□□ -0.61
ABCD4-218ENST00000553486 CRYGDP07320 174 aa11.21□□□□□ -0.61
ABCD4-218ENST00000553486 HTN1P15515 57 aa11.21□□□□□ -0.61
ABCD4-218ENST00000553486 ZNF56Q15929 161 aa11.21□□□□□ -0.61
ABCD4-218ENST00000553486 BATFQ16520 125 aa11.21□□□□□ -0.61
ABCD4-218ENST00000553486 ODF3L2Q3SX64 289 aa11.21□□□□□ -0.61
ABCD4-218ENST00000553486 STHQ8IWL8 128 aa11.21□□□□□ -0.61
ABCD4-218ENST00000553486 DKK2Q9UBU2 259 aa11.21□□□□□ -0.61
ABCD4-218ENST00000553486 TRBV6-5A0A0K0K1A5 114 aa11.21□□□□□ -0.62
ABCD4-218ENST00000553486 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.21□□□□□ -0.62
ABCD4-218ENST00000553486 VCYO14598 125 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms