RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 LY96Q9Y6Y9 160 aa12.76□□□□□ -0.37
HDAC4-217ENST00000553145 GAGE12JA6NER3 117 aa12.75□□□□□ -0.37
HDAC4-217ENST00000553145 RHODO00212 210 aa12.75□□□□□ -0.37
HDAC4-217ENST00000553145 BTF3P20290 206 aaKnown RBP12.75□□□□□ -0.37
HDAC4-217ENST00000553145 GAGE1Q13065 139 aa12.75□□□□□ -0.37
HDAC4-217ENST00000553145 GAGE4Q13068 117 aa12.75□□□□□ -0.37
HDAC4-217ENST00000553145 GAGE5Q13069 117 aa12.75□□□□□ -0.37
HDAC4-217ENST00000553145 GAGE13Q4V321 117 aa12.75□□□□□ -0.37
HDAC4-217ENST00000553145 HERC2O95714 4834 aa12.74□□□□□ -0.37
HDAC4-217ENST00000553145 SNAI2O43623 268 aa12.74□□□□□ -0.37
HDAC4-217ENST00000553145 DNAH10OSP0CZ25 163 aa12.74□□□□□ -0.37
HDAC4-217ENST00000553145 GNG4P50150 75 aa12.74□□□□□ -0.37
HDAC4-217ENST00000553145 ATP6V0E2Q8NHE4 81 aa12.74□□□□□ -0.37
HDAC4-217ENST00000553145 MUC21A0A0G2JKD1 596 aa12.73□□□□□ -0.37
HDAC4-217ENST00000553145 MUC21A0A140T8X8 626 aa12.73□□□□□ -0.37
HDAC4-217ENST00000553145 C19orf71A6NCJ1 209 aa12.73□□□□□ -0.37
HDAC4-217ENST00000553145 SSBP4Q9BWG4 385 aaPredicted RBP12.73□□□□□ -0.37
HDAC4-217ENST00000553145 OR5AL1P0C617 328 aa12.72□□□□□ -0.37
HDAC4-217ENST00000553145 TAGLN2P37802 199 aaKnown RBP12.72□□□□□ -0.37
HDAC4-217ENST00000553145 BLOC1S1P78537 153 aa12.72□□□□□ -0.37
HDAC4-217ENST00000553145 SMIM12Q96EX1 92 aa12.72□□□□□ -0.37
HDAC4-217ENST00000553145 GTSF1LQ9H1H1 148 aa12.72□□□□□ -0.37
HDAC4-217ENST00000553145 IGHV3-38A0A0C4DH36 116 aa12.71□□□□□ -0.37
HDAC4-217ENST00000553145 GZMBP10144 247 aa12.71□□□□□ -0.37
HDAC4-217ENST00000553145 EVI2AP22794 236 aa12.71□□□□□ -0.37
HDAC4-217ENST00000553145 LELP1Q5T871 98 aa12.71□□□□□ -0.37
HDAC4-217ENST00000553145 LYPD6BQ8NI32 183 aa12.71□□□□□ -0.37
HDAC4-217ENST00000553145 TRAV9-2A0A087WT02 112 aa12.7□□□□□ -0.38
HDAC4-217ENST00000553145 OR10J3Q5JRS4 329 aa12.7□□□□□ -0.38
HDAC4-217ENST00000553145 OR2D3Q8NGH3 330 aa12.7□□□□□ -0.38
HDAC4-217ENST00000553145 TRAV8-6A0A0B4J262 113 aa12.69□□□□□ -0.38
HDAC4-217ENST00000553145 IGLC6P0CF74 106 aa12.69□□□□□ -0.38
HDAC4-217ENST00000553145 SSTP61278 116 aa12.69□□□□□ -0.38
HDAC4-217ENST00000553145 LINC01556Q5JQF7 62 aa12.69□□□□□ -0.38
HDAC4-217ENST00000553145 DAZAP1Q96EP5 407 aaKnown RBP12.69□□□□□ -0.38
HDAC4-217ENST00000553145 RBFOX3A6NFN3 312 aa12.68□□□□□ -0.38
HDAC4-217ENST00000553145 K7EP13 123 aa12.68□□□□□ -0.38
HDAC4-217ENST00000553145 SPANXN1Q5VSR9 72 aa12.68□□□□□ -0.38
HDAC4-217ENST00000553145 MSRB1Q9NZV6 116 aa12.68□□□□□ -0.38
HDAC4-217ENST00000553145 K7EN84 100 aa12.67□□□□□ -0.38
HDAC4-217ENST00000553145 P01737 135 aa12.66□□□□□ -0.38
HDAC4-217ENST00000553145 IGHV3-30P01768 117 aa12.66□□□□□ -0.38
HDAC4-217ENST00000553145 IGHV3-33P01772 117 aa12.66□□□□□ -0.38
HDAC4-217ENST00000553145 IGHV3-30-3P0DP02 117 aa12.66□□□□□ -0.38
HDAC4-217ENST00000553145 IGHV3-30-5P0DP03 117 aa12.66□□□□□ -0.38
HDAC4-217ENST00000553145 KRTAP10-2P60368 255 aa12.66□□□□□ -0.38
HDAC4-217ENST00000553145 RPS20P60866 119 aaKnown RBP12.66□□□□□ -0.38
HDAC4-217ENST00000553145 ZNF56Q15929 161 aa12.66□□□□□ -0.38
HDAC4-217ENST00000553145 SPATA12Q7Z6I5 190 aa12.66□□□□□ -0.38
HDAC4-217ENST00000553145 Q8N3U1 123 aa12.66□□□□□ -0.38
HDAC4-217ENST00000553145 C10orf126Q8N4M7 172 aa12.66□□□□□ -0.38
HDAC4-217ENST00000553145 FER1L6-AS1Q8NA97 138 aa12.66□□□□□ -0.38
HDAC4-217ENST00000553145 TPPP3Q9BW30 176 aa12.66□□□□□ -0.38
HDAC4-217ENST00000553145 KIF25-AS1Q9Y6Z4 181 aa12.66□□□□□ -0.38
HDAC4-217ENST00000553145 RAB4BP61018 213 aa12.65□□□□□ -0.38
HDAC4-217ENST00000553145 NFE4Q86UQ8 179 aa12.65□□□□□ -0.38
HDAC4-217ENST00000553145 NUDT10Q8NFP7 164 aa12.65□□□□□ -0.38
HDAC4-217ENST00000553145 OCC1Q8TAD7 63 aa12.65□□□□□ -0.38
HDAC4-217ENST00000553145 NUDT11Q96G61 164 aa12.65□□□□□ -0.38
HDAC4-217ENST00000553145 TRBV10-1A0A0K0K1A3 114 aa12.64□□□□□ -0.39
HDAC4-217ENST00000553145 C16orf90A8MZG2 172 aa12.64□□□□□ -0.39
HDAC4-217ENST00000553145 TMEM250H0YL14 139 aa12.64□□□□□ -0.39
HDAC4-217ENST00000553145 TOR2AQ5JU69 321 aa12.64□□□□□ -0.39
HDAC4-217ENST00000553145 BIN3Q9NQY0 253 aa12.64□□□□□ -0.39
HDAC4-217ENST00000553145 IBA57-AS1B1ANH7 110 aa12.63□□□□□ -0.39
HDAC4-217ENST00000553145 UBE2D3P61077 147 aa12.63□□□□□ -0.39
HDAC4-217ENST00000553145 UBE2D2P62837 147 aa12.63□□□□□ -0.39
HDAC4-217ENST00000553145 AP1S3Q96PC3 154 aa12.63□□□□□ -0.39
HDAC4-217ENST00000553145 RNASE7Q9H1E1 156 aaKnown RBP12.63□□□□□ -0.39
HDAC4-217ENST00000553145 RPL36AP83881 106 aaKnown RBP12.62□□□□□ -0.39
HDAC4-217ENST00000553145 NEXN-AS1Q8NBZ9 246 aa12.62□□□□□ -0.39
HDAC4-217ENST00000553145 OR10G8Q8NGN5 311 aa12.62□□□□□ -0.39
HDAC4-217ENST00000553145 RPL36ALQ969Q0 106 aaKnown RBP12.62□□□□□ -0.39
HDAC4-217ENST00000553145 TRBV7-3A0A075B6L6 115 aa12.61□□□□□ -0.39
HDAC4-217ENST00000553145 A0A087WWC5 75 aa12.61□□□□□ -0.39
HDAC4-217ENST00000553145 XKRY2A2RUG3 117 aa12.61□□□□□ -0.39
HDAC4-217ENST00000553145 ERVFC1-1P60608 527 aa12.61□□□□□ -0.39
HDAC4-217ENST00000553145 LYZL1Q6UWQ5 148 aa12.61□□□□□ -0.39
HDAC4-217ENST00000553145 FAM210AQ96ND0 272 aa12.61□□□□□ -0.39
HDAC4-217ENST00000553145 LRP1BQ9NZR2 4599 aa12.61□□□□□ -0.39
HDAC4-217ENST00000553145 RYR1P21817 5038 aa12.6□□□□□ -0.39
HDAC4-217ENST00000553145 F5H697 171 aa12.6□□□□□ -0.39
HDAC4-217ENST00000553145 CEBPGP53567 150 aa12.6□□□□□ -0.39
HDAC4-217ENST00000553145 CACNG7P62955 275 aa12.6□□□□□ -0.39
HDAC4-217ENST00000553145 EIF5A2Q9GZV4 153 aaKnown RBP12.6□□□□□ -0.39
HDAC4-217ENST00000553145 RPP21Q9H633 154 aaKnown RBP12.6□□□□□ -0.39
HDAC4-217ENST00000553145 Q9HAA7 133 aa12.6□□□□□ -0.39
HDAC4-217ENST00000553145 A0A087WTM6 91 aa12.59□□□□□ -0.39
HDAC4-217ENST00000553145 FUSP35637 526 aaKnown RBP eCLIP12.59□□□□□ -0.39
HDAC4-217ENST00000553145 DAZ4Q86SG3 579 aaKnown RBP12.59□□□□□ -0.39
HDAC4-217ENST00000553145 DAZ3Q9NR90 486 aaKnown RBP12.59□□□□□ -0.39
HDAC4-217ENST00000553145 DNAH5Q8TE73 4624 aa12.58□□□□□ -0.39
HDAC4-217ENST00000553145 F2Z2F3 143 aa12.58□□□□□ -0.4
HDAC4-217ENST00000553145 MGPP08493 103 aa12.58□□□□□ -0.4
HDAC4-217ENST00000553145 SMIM17P0DL12 118 aa12.58□□□□□ -0.4
HDAC4-217ENST00000553145 CTRLP40313 264 aa12.58□□□□□ -0.4
HDAC4-217ENST00000553145 SRP19P09132 144 aaKnown RBP12.57□□□□□ -0.4
HDAC4-217ENST00000553145 NIT1Q86X76 327 aa12.57□□□□□ -0.4
HDAC4-217ENST00000553145 NDUFS6O75380 124 aaKnown RBP12.56□□□□□ -0.4
HDAC4-217ENST00000553145 NTF3P20783 257 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms