RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 GAGE1Q13065 139 aa8.72□□□□□ -1.01
NPAS3-209ENST00000551008 GAGE4Q13068 117 aa8.72□□□□□ -1.01
NPAS3-209ENST00000551008 GAGE5Q13069 117 aa8.72□□□□□ -1.01
NPAS3-209ENST00000551008 GAGE13Q4V321 117 aa8.72□□□□□ -1.01
NPAS3-209ENST00000551008 MAPKAPK5-AS1Q8N8E1 139 aa8.72□□□□□ -1.01
NPAS3-209ENST00000551008 GTSF1LQ9H1H1 148 aa8.72□□□□□ -1.01
NPAS3-209ENST00000551008 DNAH8Q96JB1 4490 aa8.71□□□□□ -1.01
NPAS3-209ENST00000551008 KRTAP10-1P60331 282 aa8.71□□□□□ -1.02
NPAS3-209ENST00000551008 SFRP2Q96HF1 295 aa8.71□□□□□ -1.02
NPAS3-209ENST00000551008 DERL1Q9BUN8 251 aa8.71□□□□□ -1.02
NPAS3-209ENST00000551008 A0A087WWL8 130 aa8.7□□□□□ -1.02
NPAS3-209ENST00000551008 IGHV3-30P01768 117 aa8.7□□□□□ -1.02
NPAS3-209ENST00000551008 IGHV3-33P01772 117 aa8.7□□□□□ -1.02
NPAS3-209ENST00000551008 H2AFB1P0C5Y9 115 aa8.7□□□□□ -1.02
NPAS3-209ENST00000551008 IGHV3-30-3P0DP02 117 aa8.7□□□□□ -1.02
NPAS3-209ENST00000551008 IGHV3-30-5P0DP03 117 aa8.7□□□□□ -1.02
NPAS3-209ENST00000551008 OR10J3Q5JRS4 329 aa8.7□□□□□ -1.02
NPAS3-209ENST00000551008 Q8N1X5 172 aa8.7□□□□□ -1.02
NPAS3-209ENST00000551008 C10orf126Q8N4M7 172 aa8.7□□□□□ -1.02
NPAS3-209ENST00000551008 C11orf52Q96A22 123 aa8.7□□□□□ -1.02
NPAS3-209ENST00000551008 TRAV1-1A0A0B4J248 108 aa8.69□□□□□ -1.02
NPAS3-209ENST00000551008 M0R381 172 aa8.69□□□□□ -1.02
NPAS3-209ENST00000551008 TPT1P13693 172 aaKnown RBP8.69□□□□□ -1.02
NPAS3-209ENST00000551008 XGP55808 180 aa8.69□□□□□ -1.02
NPAS3-209ENST00000551008 WFDC2Q14508 124 aa8.69□□□□□ -1.02
NPAS3-209ENST00000551008 TCTE3Q8IZS6 198 aa8.69□□□□□ -1.02
NPAS3-209ENST00000551008 OR10AG1Q8NH19 301 aa8.69□□□□□ -1.02
NPAS3-209ENST00000551008 TRAV8-6A0A0B4J262 113 aa8.68□□□□□ -1.02
NPAS3-209ENST00000551008 RHODO00212 210 aa8.68□□□□□ -1.02
NPAS3-209ENST00000551008 IGLV2-8P01709 118 aa8.68□□□□□ -1.02
NPAS3-209ENST00000551008 CXCL1P09341 107 aa8.68□□□□□ -1.02
NPAS3-209ENST00000551008 FAM74A4Q5TZK3 123 aa8.68□□□□□ -1.02
NPAS3-209ENST00000551008 CDPF1Q6NVV7 123 aa8.68□□□□□ -1.02
NPAS3-209ENST00000551008 BAGE2Q86Y30 109 aa8.68□□□□□ -1.02
NPAS3-209ENST00000551008 SYT8Q8NBV8 401 aa8.68□□□□□ -1.02
NPAS3-209ENST00000551008 SSBP4Q9BWG4 385 aaPredicted RBP8.68□□□□□ -1.02
NPAS3-209ENST00000551008 Q9HAA7 133 aa8.68□□□□□ -1.02
NPAS3-209ENST00000551008 PHLDA3Q9Y5J5 127 aa8.68□□□□□ -1.02
NPAS3-209ENST00000551008 SNAI2O43623 268 aa8.67□□□□□ -1.02
NPAS3-209ENST00000551008 PFDN1O60925 122 aa8.67□□□□□ -1.02
NPAS3-209ENST00000551008 S100A9P06702 114 aaKnown RBP8.67□□□□□ -1.02
NPAS3-209ENST00000551008 RPL35P42766 123 aaKnown RBP8.67□□□□□ -1.02
NPAS3-209ENST00000551008 SULT1A2P50226 295 aa8.67□□□□□ -1.02
NPAS3-209ENST00000551008 EIF5AP63241 154 aaKnown RBP8.67□□□□□ -1.02
NPAS3-209ENST00000551008 DAZ4Q86SG3 579 aaKnown RBP8.67□□□□□ -1.02
NPAS3-209ENST00000551008 ZFP82Q8N141 532 aa8.67□□□□□ -1.02
NPAS3-209ENST00000551008 DNAJC30Q96LL9 226 aa8.67□□□□□ -1.02
NPAS3-209ENST00000551008 DAZ3Q9NR90 486 aaKnown RBP8.67□□□□□ -1.02
NPAS3-209ENST00000551008 GNG13Q9P2W3 67 aa8.67□□□□□ -1.02
NPAS3-209ENST00000551008 MUC21A0A0G2JKD1 596 aa8.66□□□□□ -1.02
NPAS3-209ENST00000551008 MUC21A0A140T8X8 626 aa8.66□□□□□ -1.02
NPAS3-209ENST00000551008 LAGE3Q14657 143 aa8.66□□□□□ -1.02
NPAS3-209ENST00000551008 Q6ZNX1 250 aa8.66□□□□□ -1.02
NPAS3-209ENST00000551008 VPS13BQ7Z7G8 4022 aa8.65□□□□□ -1.02
NPAS3-209ENST00000551008 TRBV20OR9-2A0A075B6H5 130 aa8.65□□□□□ -1.02
NPAS3-209ENST00000551008 EREGO14944 169 aa8.65□□□□□ -1.02
NPAS3-209ENST00000551008 UBE2D3P61077 147 aa8.65□□□□□ -1.02
NPAS3-209ENST00000551008 UBE2D2P62837 147 aa8.65□□□□□ -1.02
NPAS3-209ENST00000551008 PRR27Q6MZM9 219 aa8.65□□□□□ -1.02
NPAS3-209ENST00000551008 MANBALQ9NQG1 85 aa8.65□□□□□ -1.02
NPAS3-209ENST00000551008 KIF25-AS1Q9Y6Z4 181 aa8.65□□□□□ -1.02
NPAS3-209ENST00000551008 C1QBP02746 253 aa8.64□□□□□ -1.03
NPAS3-209ENST00000551008 OR5AL1P0C617 328 aa8.64□□□□□ -1.03
NPAS3-209ENST00000551008 RAB5CP51148 216 aa8.64□□□□□ -1.03
NPAS3-209ENST00000551008 CENPWQ5EE01 88 aa8.64□□□□□ -1.03
NPAS3-209ENST00000551008 NIT1Q86X76 327 aa8.64□□□□□ -1.03
NPAS3-209ENST00000551008 TRBV10-1A0A0K0K1A3 114 aa8.63□□□□□ -1.03
NPAS3-209ENST00000551008 RAB19A4D1S5 217 aa8.63□□□□□ -1.03
NPAS3-209ENST00000551008 C19orf71A6NCJ1 209 aa8.63□□□□□ -1.03
NPAS3-209ENST00000551008 IGLC6P0CF74 106 aa8.63□□□□□ -1.03
NPAS3-209ENST00000551008 GZMBP10144 247 aa8.63□□□□□ -1.03
NPAS3-209ENST00000551008 Q8N814 137 aa8.63□□□□□ -1.03
NPAS3-209ENST00000551008 NEXN-AS1Q8NBZ9 246 aa8.63□□□□□ -1.03
NPAS3-209ENST00000551008 OR10G8Q8NGN5 311 aa8.63□□□□□ -1.03
NPAS3-209ENST00000551008 A0A087WWC5 75 aa8.62□□□□□ -1.03
NPAS3-209ENST00000551008 RBFOX3A6NFN3 312 aa8.62□□□□□ -1.03
NPAS3-209ENST00000551008 HAMPP81172 84 aa8.62□□□□□ -1.03
NPAS3-209ENST00000551008 C9orf62Q8N4C0 152 aa8.62□□□□□ -1.03
NPAS3-209ENST00000551008 TRBV7-3A0A075B6L6 115 aa8.61□□□□□ -1.03
NPAS3-209ENST00000551008 PSCAO43653 123 aa8.61□□□□□ -1.03
NPAS3-209ENST00000551008 GCSHP23434 173 aa8.61□□□□□ -1.03
NPAS3-209ENST00000551008 RAB4BP61018 213 aa8.61□□□□□ -1.03
NPAS3-209ENST00000551008 MEF2BQ02080 365 aaPredicted RBP8.61□□□□□ -1.03
NPAS3-209ENST00000551008 SLC51BQ86UW2 128 aa8.61□□□□□ -1.03
NPAS3-209ENST00000551008 LECT2O14960 151 aa8.6□□□□□ -1.03
NPAS3-209ENST00000551008 BCL2P10415 239 aa8.6□□□□□ -1.03
NPAS3-209ENST00000551008 RPL36AP83881 106 aaKnown RBP8.6□□□□□ -1.03
NPAS3-209ENST00000551008 ZNF56Q15929 161 aa8.6□□□□□ -1.03
NPAS3-209ENST00000551008 NTN5Q8WTR8 489 aaPredicted RBP8.6□□□□□ -1.03
NPAS3-209ENST00000551008 RPL36ALQ969Q0 106 aaKnown RBP8.6□□□□□ -1.03
NPAS3-209ENST00000551008 FAM30AQ9NZY2 134 aa8.6□□□□□ -1.03
NPAS3-209ENST00000551008 IGLV5-52A0A0A0MRZ9 124 aa8.59□□□□□ -1.03
NPAS3-209ENST00000551008 SSTP61278 116 aa8.59□□□□□ -1.03
NPAS3-209ENST00000551008 SPANXN1Q5VSR9 72 aa8.59□□□□□ -1.03
NPAS3-209ENST00000551008 EIF5AL1Q6IS14 154 aaKnown RBP8.59□□□□□ -1.03
NPAS3-209ENST00000551008 NTM-AS1Q6ZSK4 140 aa8.59□□□□□ -1.03
NPAS3-209ENST00000551008 FLG2Q5D862 2391 aaPredicted RBP8.58□□□□□ -1.04
NPAS3-209ENST00000551008 TRBV6-8A0A0A6YYG3 113 aa8.58□□□□□ -1.04
NPAS3-209ENST00000551008 TRAV8-3A0A0A6YYJ7 113 aa8.58□□□□□ -1.04
NPAS3-209ENST00000551008 ATRAIDQ6UW56 229 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms