RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 SPINT4Q6UDR6 99 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 FAM19A3Q7Z5A8 133 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 KTN1-AS1Q86SY8 53 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 ZNF664Q8N3J9 261 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 C9orf62Q8N4C0 152 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 STAG3L4Q8TBR4 150 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 PP6455Q8WZ26 134 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 GABARAPL1Q9H0R8 117 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 SCN3BQ9NY72 215 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 CKLFQ9UBR5 152 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 CYSLTR1Q9Y271 337 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 TRBV20OR9-2A0A075B6H5 130 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 IGHV3-21A0A0B4J1V1 117 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 TRBV7-6A0A0J9YX20 115 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 CLDN25C9JDP6 229 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 J3QQQ9 107 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 CCL25O15444 150 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 TMBIM6P55061 237 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 RHOGP84095 191 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 ZNF117Q03924 483 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 SLC38A11Q08AI6 406 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 GLIPR1L1Q6UWM5 242 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 LHFPL1Q86WI0 220 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 SBSPONQ8IVN8 264 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 MSRB3Q8IXL7 192 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 DEFB108BQ8NET1 73 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 TEX37Q96LM6 180 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 GPX7Q96SL4 187 aaPredicted RBP3.05□□□□□ -1.92
CPSF6-206ENST00000550987 TUBA4BQ9H853 241 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 PCTPQ9UKL6 214 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 ICOSQ9Y6W8 199 aa3.05□□□□□ -1.92
CPSF6-206ENST00000550987 MDFIC2A0A1B0GVS7 189 aa3.04□□□□□ -1.92
CPSF6-206ENST00000550987 GABARAPH6UMI1 98 aa3.04□□□□□ -1.92
CPSF6-206ENST00000550987 H7BYZ3 331 aa3.04□□□□□ -1.92
CPSF6-206ENST00000550987 LST1O00453 97 aa3.04□□□□□ -1.92
CPSF6-206ENST00000550987 SNAPC5O75971 98 aa3.04□□□□□ -1.92
CPSF6-206ENST00000550987 FSTL3O95633 263 aa3.04□□□□□ -1.92
CPSF6-206ENST00000550987 TRGC2P03986 189 aa3.04□□□□□ -1.92
CPSF6-206ENST00000550987 LY6EQ16553 131 aa3.04□□□□□ -1.92
CPSF6-206ENST00000550987 C1orf140Q5VVS0 124 aa3.04□□□□□ -1.92
CPSF6-206ENST00000550987 LAIR2Q6ISS4 152 aa3.04□□□□□ -1.92
CPSF6-206ENST00000550987 C4orf33Q8N1A6 199 aa3.04□□□□□ -1.92
CPSF6-206ENST00000550987 FER1L6-AS1Q8NA97 138 aa3.04□□□□□ -1.92
CPSF6-206ENST00000550987 OR10AC1Q8NH08 325 aa3.04□□□□□ -1.92
CPSF6-206ENST00000550987 POP5Q969H6 163 aaKnown RBP3.04□□□□□ -1.92
CPSF6-206ENST00000550987 OR4C12Q96R67 309 aa3.04□□□□□ -1.92
CPSF6-206ENST00000550987 SNHG12Q9BXW3 62 aa3.04□□□□□ -1.92
CPSF6-206ENST00000550987 C11orf68Q9H3H3 251 aaKnown RBP3.04□□□□□ -1.92
CPSF6-206ENST00000550987 IGHV3-43A0A0B4J1X8 118 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 A0A1W2PQD3 144 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 M0R233 179 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 COX7A2LO14548 114 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 LTAP01374 205 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 TRGV3P03979 118 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 ZNF705DP0CH99 300 aaPredicted RBP3.03□□□□□ -1.92
CPSF6-206ENST00000550987 ZNF728P0DKX0 622 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 PSMB8P28062 276 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 SDC2P34741 201 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 TPPP2P59282 170 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 DEFA3P59666 94 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 CCL8P80075 99 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 MEF2BQ02080 365 aaPredicted RBP3.03□□□□□ -1.92
CPSF6-206ENST00000550987 DEFB112Q30KQ8 113 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 EBLN2Q6P2I7 272 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 TMEM14EPQ6UXP3 125 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 RPS27LQ71UM5 84 aaKnown RBP3.03□□□□□ -1.92
CPSF6-206ENST00000550987 TRAPPC6BQ86SZ2 158 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 YIPF7Q8N8F6 280 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 DEDD2Q8WXF8 326 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 MRPL57Q9BQC6 102 aaKnown RBP3.03□□□□□ -1.92
CPSF6-206ENST00000550987 TM2D3Q9BRN9 247 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 TMEM133Q9H2Q1 129 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 TAS2R8Q9NYW2 309 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 IER3IP1Q9Y5U9 82 aa3.03□□□□□ -1.92
CPSF6-206ENST00000550987 LOC107984640A0A0U1RRK4 108 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 A8MUN3 132 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 ZNF670-ZNF695F2Z2N8 137 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 CST7O76096 145 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 SRP19P09132 144 aaKnown RBP3.02□□□□□ -1.93
CPSF6-206ENST00000550987 CD7P09564 240 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 IGLC6P0CF74 106 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 LINC00694P0DN24 101 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 ZNF14P17017 642 aaPredicted RBP3.02□□□□□ -1.93
CPSF6-206ENST00000550987 LGALS3P17931 250 aaKnown RBP3.02□□□□□ -1.93
CPSF6-206ENST00000550987 NFYBP25208 207 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 FKBP2P26885 142 aaKnown RBP3.02□□□□□ -1.93
CPSF6-206ENST00000550987 HSD52Q0P140 79 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 RRN3P1Q2M238 152 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 Q5XG85 94 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 RPL22L1Q6P5R6 122 aaKnown RBP3.02□□□□□ -1.93
CPSF6-206ENST00000550987 LCA10Q71F78 164 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 AAED1Q7RTV5 226 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 OR2T10Q8NGZ9 312 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 COPS9Q8WXC6 57 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 MAL2Q969L2 176 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 ERMAPQ96PL5 475 aaPredicted RBP3.02□□□□□ -1.93
CPSF6-206ENST00000550987 GINS4Q9BRT9 223 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 RPRMQ9NS64 109 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 ZNF492Q9P255 531 aa3.02□□□□□ -1.93
CPSF6-206ENST00000550987 FCGBPQ9Y6R7 5405 aaPredicted RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 937.4 ms