RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 KRBOX1C9JBD0 128 aa10.03□□□□□ -0.8
RAB5C-205ENST00000550013 OXTP01178 125 aa10.03□□□□□ -0.8
RAB5C-205ENST00000550013 IFNA7P01567 189 aa10.03□□□□□ -0.8
RAB5C-205ENST00000550013 MBP02144 154 aa10.03□□□□□ -0.8
RAB5C-205ENST00000550013 SEC11BP0C7V7 166 aa10.03□□□□□ -0.8
RAB5C-205ENST00000550013 CRIP1P50238 77 aa10.03□□□□□ -0.8
RAB5C-205ENST00000550013 UBE2G2P60604 165 aa10.03□□□□□ -0.8
RAB5C-205ENST00000550013 SERF2P84101 59 aa10.03□□□□□ -0.8
RAB5C-205ENST00000550013 OR11H4Q8NGC9 324 aa10.03□□□□□ -0.8
RAB5C-205ENST00000550013 PEX7O00628 323 aa10.02□□□□□ -0.81
RAB5C-205ENST00000550013 DNLZQ5SXM8 178 aa10.02□□□□□ -0.81
RAB5C-205ENST00000550013 ATRAIDQ6UW56 229 aa10.02□□□□□ -0.81
RAB5C-205ENST00000550013 ZC2HC1AQ96GY0 325 aa10.02□□□□□ -0.81
RAB5C-205ENST00000550013 AQP10Q96PS8 301 aa10.02□□□□□ -0.81
RAB5C-205ENST00000550013 TNFSF18Q9UNG2 199 aa10.02□□□□□ -0.81
RAB5C-205ENST00000550013 SH2D1AO60880 128 aa10.01□□□□□ -0.81
RAB5C-205ENST00000550013 IGLV2-8P01709 118 aa10.01□□□□□ -0.81
RAB5C-205ENST00000550013 DEFA1P59665 94 aa10.01□□□□□ -0.81
RAB5C-205ENST00000550013 DEFA3P59666 94 aa10.01□□□□□ -0.81
RAB5C-205ENST00000550013 ZNF726P1Q15940 193 aa10.01□□□□□ -0.81
RAB5C-205ENST00000550013 SFRP2Q96HF1 295 aa10.01□□□□□ -0.81
RAB5C-205ENST00000550013 CHCHD7Q9BUK0 85 aa10.01□□□□□ -0.81
RAB5C-205ENST00000550013 ALG5Q9Y673 324 aa10.01□□□□□ -0.81
RAB5C-205ENST00000550013 M0R381 172 aa10□□□□□ -0.81
RAB5C-205ENST00000550013 ELOBQ15370 118 aa10□□□□□ -0.81
RAB5C-205ENST00000550013 PHLDA3Q9Y5J5 127 aa10□□□□□ -0.81
RAB5C-205ENST00000550013 TMSB15BA0A087X1C1 80 aa9.99□□□□□ -0.81
RAB5C-205ENST00000550013 UBE2D3P61077 147 aa9.99□□□□□ -0.81
RAB5C-205ENST00000550013 UBE2D2P62837 147 aa9.99□□□□□ -0.81
RAB5C-205ENST00000550013 KCNIP4Q6PIL6 250 aa9.99□□□□□ -0.81
RAB5C-205ENST00000550013 ENHOQ6UWT2 76 aa9.99□□□□□ -0.81
RAB5C-205ENST00000550013 PLA2G2DQ9UNK4 145 aa9.99□□□□□ -0.81
RAB5C-205ENST00000550013 TRBV10-1A0A0K0K1A3 114 aa9.98□□□□□ -0.81
RAB5C-205ENST00000550013 FAM74A7A6NL05 159 aa9.98□□□□□ -0.81
RAB5C-205ENST00000550013 TMEM262E9PQX1 116 aa9.98□□□□□ -0.81
RAB5C-205ENST00000550013 TPT1P13693 172 aaKnown RBP9.98□□□□□ -0.81
RAB5C-205ENST00000550013 HNRNPA3P51991 378 aaKnown RBP9.98□□□□□ -0.81
RAB5C-205ENST00000550013 RPL36AP83881 106 aaKnown RBP9.98□□□□□ -0.81
RAB5C-205ENST00000550013 Q0VG73 95 aa9.98□□□□□ -0.81
RAB5C-205ENST00000550013 Q5BKY6 102 aa9.98□□□□□ -0.81
RAB5C-205ENST00000550013 FAM162BQ5T6X4 162 aa9.98□□□□□ -0.81
RAB5C-205ENST00000550013 RPL7L1Q6DKI1 246 aaKnown RBP9.98□□□□□ -0.81
RAB5C-205ENST00000550013 RPL36ALQ969Q0 106 aaKnown RBP9.98□□□□□ -0.81
RAB5C-205ENST00000550013 C1orf43Q9BWL3 253 aa9.98□□□□□ -0.81
RAB5C-205ENST00000550013 TRBV7-3A0A075B6L6 115 aa9.97□□□□□ -0.81
RAB5C-205ENST00000550013 CTXND1A0A1B0GTU2 59 aa9.97□□□□□ -0.81
RAB5C-205ENST00000550013 RPL37AP61513 92 aaKnown RBP9.97□□□□□ -0.81
RAB5C-205ENST00000550013 C14orf177Q52M58 125 aa9.97□□□□□ -0.81
RAB5C-205ENST00000550013 COX8CQ7Z4L0 72 aa9.97□□□□□ -0.81
RAB5C-205ENST00000550013 C15orf54Q8N8G6 183 aa9.97□□□□□ -0.81
RAB5C-205ENST00000550013 HIST1H2BAQ96A08 127 aa9.97□□□□□ -0.81
RAB5C-205ENST00000550013 USP17L23D6RBM5 183 aa9.96□□□□□ -0.82
RAB5C-205ENST00000550013 LINC01559Q495D7 138 aa9.96□□□□□ -0.82
RAB5C-205ENST00000550013 MPV17L2Q567V2 206 aa9.96□□□□□ -0.82
RAB5C-205ENST00000550013 ZFP82Q8N141 532 aa9.96□□□□□ -0.82
RAB5C-205ENST00000550013 ZFP30Q9Y2G7 519 aa9.96□□□□□ -0.82
RAB5C-205ENST00000550013 TRBV6-8A0A0A6YYG3 113 aa9.95□□□□□ -0.82
RAB5C-205ENST00000550013 HLA-DQA1P01909 254 aa9.95□□□□□ -0.82
RAB5C-205ENST00000550013 CRPP02741 224 aa9.95□□□□□ -0.82
RAB5C-205ENST00000550013 ZNF674Q2M3X9 581 aa9.95□□□□□ -0.82
RAB5C-205ENST00000550013 OR10G8Q8NGN5 311 aa9.95□□□□□ -0.82
RAB5C-205ENST00000550013 DAZAP1Q96EP5 407 aaKnown RBP9.95□□□□□ -0.82
RAB5C-205ENST00000550013 A6NHS1 94 aa9.94□□□□□ -0.82
RAB5C-205ENST00000550013 ANGP03950 147 aaKnown RBP9.94□□□□□ -0.82
RAB5C-205ENST00000550013 PRSS1P07477 247 aa9.94□□□□□ -0.82
RAB5C-205ENST00000550013 UBE2G1P62253 170 aa9.94□□□□□ -0.82
RAB5C-205ENST00000550013 NEXN-AS1Q8NBZ9 246 aa9.94□□□□□ -0.82
RAB5C-205ENST00000550013 FMC1Q96HJ9 113 aa9.94□□□□□ -0.82
RAB5C-205ENST00000550013 NKX6-2Q9C056 277 aaPredicted RBP9.94□□□□□ -0.82
RAB5C-205ENST00000550013 BORCS7-ASMTA0A0B4J1R7 106 aa9.93□□□□□ -0.82
RAB5C-205ENST00000550013 LTAP01374 205 aa9.93□□□□□ -0.82
RAB5C-205ENST00000550013 MED28Q9H204 178 aa9.93□□□□□ -0.82
RAB5C-205ENST00000550013 PANO1I0J062 215 aa9.92□□□□□ -0.82
RAB5C-205ENST00000550013 PTTG1O95997 202 aa9.92□□□□□ -0.82
RAB5C-205ENST00000550013 RAB4BP61018 213 aa9.92□□□□□ -0.82
RAB5C-205ENST00000550013 ZNF56Q15929 161 aa9.92□□□□□ -0.82
RAB5C-205ENST00000550013 PRR27Q6MZM9 219 aa9.92□□□□□ -0.82
RAB5C-205ENST00000550013 INO80EQ8NBZ0 244 aaPredicted RBP9.92□□□□□ -0.82
RAB5C-205ENST00000550013 CHCHD5Q9BSY4 110 aa9.92□□□□□ -0.82
RAB5C-205ENST00000550013 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.92□□□□□ -0.82
RAB5C-205ENST00000550013 FXYD6-FXYD2A0A087WZ82 144 aa9.91□□□□□ -0.82
RAB5C-205ENST00000550013 TRBV6-1A0A0K0K1D8 114 aa9.91□□□□□ -0.82
RAB5C-205ENST00000550013 MAP1LC3B2A6NCE7 125 aa9.91□□□□□ -0.82
RAB5C-205ENST00000550013 RPL19P84098 196 aaKnown RBP9.91□□□□□ -0.82
RAB5C-205ENST00000550013 AKR1C8PQ5T2L2 129 aa9.91□□□□□ -0.82
RAB5C-205ENST00000550013 CLPSL2Q6UWE3 100 aa9.91□□□□□ -0.82
RAB5C-205ENST00000550013 OR10AG1Q8NH19 301 aa9.91□□□□□ -0.82
RAB5C-205ENST00000550013 MAP1LC3BQ9GZQ8 125 aa9.91□□□□□ -0.82
RAB5C-205ENST00000550013 MUC21A0A0G2JKD1 596 aa9.9□□□□□ -0.82
RAB5C-205ENST00000550013 MUC21A0A140T8X8 626 aa9.9□□□□□ -0.82
RAB5C-205ENST00000550013 GIPP09681 153 aaPredicted RBP9.9□□□□□ -0.82
RAB5C-205ENST00000550013 MIAQ16674 131 aa9.9□□□□□ -0.82
RAB5C-205ENST00000550013 CST9LP1Q5W188 147 aa9.9□□□□□ -0.82
RAB5C-205ENST00000550013 NTM-AS1Q6ZSK4 140 aa9.9□□□□□ -0.82
RAB5C-205ENST00000550013 C9orf163Q8N9P6 203 aa9.9□□□□□ -0.82
RAB5C-205ENST00000550013 AKR1C3P42330 323 aa9.89□□□□□ -0.83
RAB5C-205ENST00000550013 DGAT2L7PQ6IED9 249 aa9.89□□□□□ -0.83
RAB5C-205ENST00000550013 KRTAP26-1Q6PEX3 210 aa9.89□□□□□ -0.83
RAB5C-205ENST00000550013 MT1HL1P0DM35 61 aa9.88□□□□□ -0.83
RAB5C-205ENST00000550013 FHITP49789 147 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms