RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 PSCAO43653 123 aa12.51□□□□□ -0.41
CHMP1A-203ENST00000547614 LAGE3Q14657 143 aa12.51□□□□□ -0.41
CHMP1A-203ENST00000547614 BAGE2Q86Y30 109 aa12.51□□□□□ -0.41
CHMP1A-203ENST00000547614 ZFP82Q8N141 532 aa12.51□□□□□ -0.41
CHMP1A-203ENST00000547614 C14orf178Q8N769 122 aaPredicted RBP12.51□□□□□ -0.41
CHMP1A-203ENST00000547614 Q9UF83 564 aa12.51□□□□□ -0.41
CHMP1A-203ENST00000547614 M0R381 172 aa12.5□□□□□ -0.41
CHMP1A-203ENST00000547614 IGHV3-30P01768 117 aa12.5□□□□□ -0.41
CHMP1A-203ENST00000547614 IGHV3-33P01772 117 aa12.5□□□□□ -0.41
CHMP1A-203ENST00000547614 CXCL1P09341 107 aa12.5□□□□□ -0.41
CHMP1A-203ENST00000547614 IGHV3-30-3P0DP02 117 aa12.5□□□□□ -0.41
CHMP1A-203ENST00000547614 IGHV3-30-5P0DP03 117 aa12.5□□□□□ -0.41
CHMP1A-203ENST00000547614 RAB5CP51148 216 aa12.5□□□□□ -0.41
CHMP1A-203ENST00000547614 FAM74A4Q5TZK3 123 aa12.5□□□□□ -0.41
CHMP1A-203ENST00000547614 DNAH5Q8TE73 4624 aa12.5□□□□□ -0.41
CHMP1A-203ENST00000547614 TRAV1-1A0A0B4J248 108 aa12.49□□□□□ -0.41
CHMP1A-203ENST00000547614 EIF5AL1Q6IS14 154 aaKnown RBP12.49□□□□□ -0.41
CHMP1A-203ENST00000547614 APOBP04114 4563 aaKnown RBP12.48□□□□□ -0.41
CHMP1A-203ENST00000547614 A0A087WWL8 130 aa12.48□□□□□ -0.41
CHMP1A-203ENST00000547614 TRBV10-1A0A0K0K1A3 114 aa12.48□□□□□ -0.41
CHMP1A-203ENST00000547614 LRCOL1A6NCL2 159 aa12.48□□□□□ -0.41
CHMP1A-203ENST00000547614 FUSP35637 526 aaKnown RBP eCLIP12.48□□□□□ -0.41
CHMP1A-203ENST00000547614 Q9HAA7 133 aa12.48□□□□□ -0.41
CHMP1A-203ENST00000547614 MANBALQ9NQG1 85 aa12.48□□□□□ -0.41
CHMP1A-203ENST00000547614 SSBP4Q9BWG4 385 aaPredicted RBP12.47□□□□□ -0.41
CHMP1A-203ENST00000547614 TEX46H3BTG2 121 aa12.46□□□□□ -0.41
CHMP1A-203ENST00000547614 CCL20P78556 96 aa12.46□□□□□ -0.41
CHMP1A-203ENST00000547614 C11orf52Q96A22 123 aa12.46□□□□□ -0.41
CHMP1A-203ENST00000547614 TM2D2Q9BX73 214 aa12.46□□□□□ -0.41
CHMP1A-203ENST00000547614 TRAV8-3A0A0A6YYJ7 113 aa12.45□□□□□ -0.42
CHMP1A-203ENST00000547614 OR5AL1P0C617 328 aa12.45□□□□□ -0.42
CHMP1A-203ENST00000547614 RPL35P42766 123 aaKnown RBP12.45□□□□□ -0.42
CHMP1A-203ENST00000547614 RPL19P84098 196 aaKnown RBP12.45□□□□□ -0.42
CHMP1A-203ENST00000547614 TOR2AQ5JU69 321 aa12.45□□□□□ -0.42
CHMP1A-203ENST00000547614 TCTE3Q8IZS6 198 aa12.45□□□□□ -0.42
CHMP1A-203ENST00000547614 NTN5Q8WTR8 489 aaPredicted RBP12.45□□□□□ -0.42
CHMP1A-203ENST00000547614 GNG13Q9P2W3 67 aa12.45□□□□□ -0.42
CHMP1A-203ENST00000547614 SNAI2O43623 268 aa12.44□□□□□ -0.42
CHMP1A-203ENST00000547614 GCSHP23434 173 aa12.44□□□□□ -0.42
CHMP1A-203ENST00000547614 XGP55808 180 aa12.44□□□□□ -0.42
CHMP1A-203ENST00000547614 KRTAP10-1P60331 282 aa12.44□□□□□ -0.42
CHMP1A-203ENST00000547614 RPL36AP83881 106 aaKnown RBP12.44□□□□□ -0.42
CHMP1A-203ENST00000547614 OR10AG1Q8NH19 301 aa12.44□□□□□ -0.42
CHMP1A-203ENST00000547614 RPL36ALQ969Q0 106 aaKnown RBP12.44□□□□□ -0.42
CHMP1A-203ENST00000547614 TRBV7-3A0A075B6L6 115 aa12.43□□□□□ -0.42
CHMP1A-203ENST00000547614 SULT1A2P50226 295 aa12.43□□□□□ -0.42
CHMP1A-203ENST00000547614 RAB4BP61018 213 aa12.43□□□□□ -0.42
CHMP1A-203ENST00000547614 PRR27Q6MZM9 219 aa12.43□□□□□ -0.42
CHMP1A-203ENST00000547614 DAZ4Q86SG3 579 aaKnown RBP12.43□□□□□ -0.42
CHMP1A-203ENST00000547614 Q8N3U1 123 aa12.43□□□□□ -0.42
CHMP1A-203ENST00000547614 DAZ3Q9NR90 486 aaKnown RBP12.43□□□□□ -0.42
CHMP1A-203ENST00000547614 UBE2D3P61077 147 aa12.42□□□□□ -0.42
CHMP1A-203ENST00000547614 UBE2D2P62837 147 aa12.42□□□□□ -0.42
CHMP1A-203ENST00000547614 NIT1Q86X76 327 aa12.42□□□□□ -0.42
CHMP1A-203ENST00000547614 Q8N814 137 aa12.42□□□□□ -0.42
CHMP1A-203ENST00000547614 OR10G8Q8NGN5 311 aa12.42□□□□□ -0.42
CHMP1A-203ENST00000547614 DERL1Q9BUN8 251 aa12.42□□□□□ -0.42
CHMP1A-203ENST00000547614 URGCP-MRPS24S4R325 110 aa12.42□□□□□ -0.42
CHMP1A-203ENST00000547614 IGLV5-52A0A0A0MRZ9 124 aa12.41□□□□□ -0.42
CHMP1A-203ENST00000547614 SPANXN1Q5VSR9 72 aa12.41□□□□□ -0.42
CHMP1A-203ENST00000547614 SMIM12Q96EX1 92 aa12.41□□□□□ -0.42
CHMP1A-203ENST00000547614 CHCHD7Q9BUK0 85 aa12.41□□□□□ -0.42
CHMP1A-203ENST00000547614 COX11Q9Y6N1 276 aa12.41□□□□□ -0.42
CHMP1A-203ENST00000547614 ABCA13Q86UQ4 5058 aa12.41□□□□□ -0.42
CHMP1A-203ENST00000547614 SLC51BQ86UW2 128 aa12.4□□□□□ -0.42
CHMP1A-203ENST00000547614 PDE6DO43924 150 aa12.39□□□□□ -0.43
CHMP1A-203ENST00000547614 C1QBP02746 253 aa12.39□□□□□ -0.43
CHMP1A-203ENST00000547614 MEF2BQ02080 365 aaPredicted RBP12.39□□□□□ -0.43
CHMP1A-203ENST00000547614 ZNF56Q15929 161 aa12.39□□□□□ -0.43
CHMP1A-203ENST00000547614 CENPWQ5EE01 88 aa12.39□□□□□ -0.43
CHMP1A-203ENST00000547614 EPM2AB3EWF7 344 aa12.38□□□□□ -0.43
CHMP1A-203ENST00000547614 IFNA1P01562 189 aa12.38□□□□□ -0.43
CHMP1A-203ENST00000547614 IGLV2-8P01709 118 aa12.38□□□□□ -0.43
CHMP1A-203ENST00000547614 ELOBQ15370 118 aa12.38□□□□□ -0.43
CHMP1A-203ENST00000547614 RMI2Q96E14 147 aa12.38□□□□□ -0.43
CHMP1A-203ENST00000547614 DAZAP1Q96EP5 407 aaKnown RBP12.38□□□□□ -0.43
CHMP1A-203ENST00000547614 A0A087WX48 190 aa12.37□□□□□ -0.43
CHMP1A-203ENST00000547614 MUC21A0A0G2JKD1 596 aa12.37□□□□□ -0.43
CHMP1A-203ENST00000547614 MUC21A0A140T8X8 626 aa12.37□□□□□ -0.43
CHMP1A-203ENST00000547614 RPS20P60866 119 aaKnown RBP12.37□□□□□ -0.43
CHMP1A-203ENST00000547614 Q6ZNX1 250 aa12.37□□□□□ -0.43
CHMP1A-203ENST00000547614 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.37□□□□□ -0.43
CHMP1A-203ENST00000547614 NEXN-AS1Q8NBZ9 246 aa12.37□□□□□ -0.43
CHMP1A-203ENST00000547614 TMEM70Q9BUB7 260 aa12.37□□□□□ -0.43
CHMP1A-203ENST00000547614 TRBV6-8A0A0A6YYG3 113 aa12.36□□□□□ -0.43
CHMP1A-203ENST00000547614 C19orf71A6NCJ1 209 aa12.36□□□□□ -0.43
CHMP1A-203ENST00000547614 SMIM17P0DL12 118 aa12.36□□□□□ -0.43
CHMP1A-203ENST00000547614 TAGLN2P37802 199 aaKnown RBP12.36□□□□□ -0.43
CHMP1A-203ENST00000547614 GNG4P50150 75 aa12.36□□□□□ -0.43
CHMP1A-203ENST00000547614 KCNIP4Q6PIL6 250 aa12.36□□□□□ -0.43
CHMP1A-203ENST00000547614 AP1S3Q96PC3 154 aa12.36□□□□□ -0.43
CHMP1A-203ENST00000547614 KIF25-AS1Q9Y6Z4 181 aa12.36□□□□□ -0.43
CHMP1A-203ENST00000547614 RAB19A4D1S5 217 aa12.35□□□□□ -0.43
CHMP1A-203ENST00000547614 F5H697 171 aa12.35□□□□□ -0.43
CHMP1A-203ENST00000547614 IGLC6P0CF74 106 aa12.35□□□□□ -0.43
CHMP1A-203ENST00000547614 BCL2P10415 239 aa12.35□□□□□ -0.43
CHMP1A-203ENST00000547614 OR2D3Q8NGH3 330 aa12.35□□□□□ -0.43
CHMP1A-203ENST00000547614 BIN3Q9NQY0 253 aa12.35□□□□□ -0.43
CHMP1A-203ENST00000547614 MED9Q9NWA0 146 aa12.35□□□□□ -0.43
CHMP1A-203ENST00000547614 VAX2Q9UIW0 290 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms