RNA–Protein interactions for RNA: ENST00000545279.5

SMAD5-211, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD5, Length 7,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-211ENST00000545279 C1orf229Q6ZS94 237 aaPredicted RBP4.89□□□□□ -1.63
SMAD5-211ENST00000545279 RSPO3Q9BXY4 272 aaPredicted RBP4.89□□□□□ -1.63
SMAD5-211ENST00000545279 MTORP42345 2549 aa4.89□□□□□ -1.63
SMAD5-211ENST00000545279 HIVEP3Q5T1R4 2406 aa4.89□□□□□ -1.63
SMAD5-211ENST00000545279 ARID1AO14497 2285 aa4.89□□□□□ -1.63
SMAD5-211ENST00000545279 ATXN8Q156A1 80 aa4.89□□□□□ -1.63
SMAD5-211ENST00000545279 LINC01551Q86U37 167 aa4.89□□□□□ -1.63
SMAD5-211ENST00000545279 JMJD1CQ15652 2540 aa4.89□□□□□ -1.63
SMAD5-211ENST00000545279 TRBV6-1A0A0K0K1D8 114 aa4.89□□□□□ -1.63
SMAD5-211ENST00000545279 ALPK2Q86TB3 2170 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 IGHV3-64A0A075B6Q5 118 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 TRAV26-2A0A0B4J265 109 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 CD300CQ08708 224 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 UFSP1Q6NVU6 142 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 MYOFQ9NZM1 2061 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 MALRD1Q5VYJ5 2156 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 J3QL48 77 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 H3BQ85 93 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 CHD5Q8TDI0 1954 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 MAJINQ3KP22 176 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 CARD19Q96LW7 228 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 PI4KAP42356 2102 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 LOC107984640A0A0U1RRK4 108 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 LRCOL1A6NCL2 159 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 NDUFB1O75438 58 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 STPG4Q8N801 248 aa4.88□□□□□ -1.63
SMAD5-211ENST00000545279 RS1O15537 224 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 LINC00336Q6ZUF6 198 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 A0A1B0GVG6 124 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 CLUHP3Q96NS8 147 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 HTTP42858 3142 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 BTCP35070 178 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 ODF3L2Q3SX64 289 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 PIK3CD-AS1Q5SR53 167 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 NUP35Q8NFH5 326 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 TIMM17AQ99595 171 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 SCRT2Q9NQ03 307 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.87□□□□□ -1.637e-10■■■■■ 47
SMAD5-211ENST00000545279 FLNBO75369 2602 aaKnown RBP4.87□□□□□ -1.63
SMAD5-211ENST00000545279 PIKFYVEQ9Y2I7 2098 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 SUMO4Q6EEV6 95 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 C5orf38Q86SI9 138 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 UQCR10Q9UDW1 63 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 TRAV13-2A0A0B4J235 113 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 NIT1Q86X76 327 aa4.87□□□□□ -1.63
SMAD5-211ENST00000545279 TLN1Q9Y490 2541 aaKnown RBP4.86□□□□□ -1.63
SMAD5-211ENST00000545279 SPEGQ15772 3267 aa4.86□□□□□ -1.63
SMAD5-211ENST00000545279 PGPEP1LA6NFU8 196 aa4.86□□□□□ -1.63
SMAD5-211ENST00000545279 MDFIQ99750 246 aa4.86□□□□□ -1.63
SMAD5-211ENST00000545279 PLA2G1BP04054 148 aaKnown RBP4.86□□□□□ -1.63
SMAD5-211ENST00000545279 KIR3DS1Q14943 382 aa4.86□□□□□ -1.63
SMAD5-211ENST00000545279 BOD1L2Q8IYS8 172 aa4.86□□□□□ -1.63
SMAD5-211ENST00000545279 C5orf30Q96GV9 206 aa4.86□□□□□ -1.63
SMAD5-211ENST00000545279 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.86□□□□□ -1.63
SMAD5-211ENST00000545279 Q9H8V8 135 aa4.86□□□□□ -1.63
SMAD5-211ENST00000545279 ERG28Q9UKR5 140 aa4.86□□□□□ -1.63
SMAD5-211ENST00000545279 CARHSP1Q9Y2V2 147 aaKnown RBP4.86□□□□□ -1.63
SMAD5-211ENST00000545279 PDCD11Q14690 1871 aaKnown RBP4.86□□□□□ -1.63
SMAD5-211ENST00000545279 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.85□□□□□ -1.63
SMAD5-211ENST00000545279 IGKV2-29A2NJV5 120 aaPredicted RBP4.85□□□□□ -1.63
SMAD5-211ENST00000545279 CBLN2Q8IUK8 224 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 COX7B2Q8TF08 81 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 ZFAND3Q9H8U3 227 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 UBE2D4Q9Y2X8 147 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 NYNRINQ9P2P1 1898 aaKnown RBP4.85□□□□□ -1.63
SMAD5-211ENST00000545279 LGALS9CQ6DKI2 356 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 SPTBP11277 2137 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 PROP1O75360 226 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 PRB4P10163 310 aaPredicted RBP4.85□□□□□ -1.63
SMAD5-211ENST00000545279 ZNF664Q8N3J9 261 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 RETNQ9HD89 108 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 INAFM2P0DMQ5 153 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 IFITM3Q01628 133 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 MORN5Q5VZ52 161 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 PATE2Q6UY27 113 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 CHCHD10Q8WYQ3 142 aaPredicted RBP4.85□□□□□ -1.63
SMAD5-211ENST00000545279 ZFC3H1O60293 1989 aaKnown RBP4.85□□□□□ -1.63
SMAD5-211ENST00000545279 GAGE10A6NGK3 116 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 F8WDY8 70 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 C17orf77Q96MU5 243 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 PCM1Q15154 2024 aa4.85□□□□□ -1.63
SMAD5-211ENST00000545279 RBMY1FQ15415 496 aaKnown RBP4.84□□□□□ -1.63
SMAD5-211ENST00000545279 PLXNA2O75051 1894 aa4.84□□□□□ -1.63
SMAD5-211ENST00000545279 SPATA45Q537H7 98 aa4.84□□□□□ -1.63
SMAD5-211ENST00000545279 DKK2Q9UBU2 259 aa4.84□□□□□ -1.63
SMAD5-211ENST00000545279 Q6ZTC4 211 aa4.84□□□□□ -1.63
SMAD5-211ENST00000545279 ZNF479Q96JC4 524 aa4.84□□□□□ -1.63
SMAD5-211ENST00000545279 C9orf85Q96MD7 179 aa4.84□□□□□ -1.63
SMAD5-211ENST00000545279 IGKV2D-26A0A0A0MRZ7 120 aa4.84□□□□□ -1.64
SMAD5-211ENST00000545279 RPL28P46779 137 aaKnown RBP4.84□□□□□ -1.64
SMAD5-211ENST00000545279 C18orf65Q6ZTR6 163 aa4.84□□□□□ -1.64
SMAD5-211ENST00000545279 TMEM170AQ8WVE7 144 aa4.84□□□□□ -1.64
SMAD5-211ENST00000545279 IGLV4-69A0A075B6H9 119 aa4.84□□□□□ -1.64
SMAD5-211ENST00000545279 PRAC2D3DTV9 90 aa4.84□□□□□ -1.64
SMAD5-211ENST00000545279 EGR2P11161 476 aaPredicted RBP4.84□□□□□ -1.64
SMAD5-211ENST00000545279 FUSP35637 526 aaKnown RBP eCLIP4.84□□□□□ -1.64
SMAD5-211ENST00000545279 C6orf223Q8N319 242 aa4.84□□□□□ -1.64
SMAD5-211ENST00000545279 ZNF625Q96I27 306 aaPredicted RBP4.84□□□□□ -1.64
SMAD5-211ENST00000545279 IGLC2P0DOY2 106 aa4.83□□□□□ -1.64
SMAD5-211ENST00000545279 PAM16Q9Y3D7 125 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms