RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 MTFP1Q9UDX5 166 aa2.52□□□□□ -2.01
SNHG1-220ENST00000544550 NAGKQ9UJ70 344 aa2.52□□□□□ -2.01
SNHG1-220ENST00000544550 A0A087WZ39 114 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 IGHV3-73A0A0B4J1V6 119 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 TRAV21A0A0B4J279 112 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 RBAKDNA6NC62 111 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 TMEM262E9PQX1 116 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 H3BP45 60 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 NDUFS6O75380 124 aaKnown RBP2.51□□□□□ -2.01
SNHG1-220ENST00000544550 IFNA7P01567 189 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 TCRBP04435 133 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 CHTF8P0CG12 524 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 AQP4P55087 323 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 MAJINQ3KP22 176 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 ENHOQ6UWT2 76 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 ZFP2Q6ZN57 461 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 EXOC3-AS1Q8N2X6 119 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 TMEM75Q8N9X5 138 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 RAB2BQ8WUD1 216 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 PTH2Q96A98 100 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 C2orf48Q96LS8 159 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 PSENENQ9NZ42 101 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 CCDC59Q9P031 241 aaKnown RBP2.51□□□□□ -2.01
SNHG1-220ENST00000544550 LINC00474Q9P2X8 69 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 SCP2D1Q9UJQ7 156 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 PKIGQ9Y2B9 76 aa2.51□□□□□ -2.01
SNHG1-220ENST00000544550 A8MWV9 139 aa2.5□□□□□ -2.01
SNHG1-220ENST00000544550 FAM25AB3EWG3 89 aa2.5□□□□□ -2.01
SNHG1-220ENST00000544550 FAM25CB3EWG5 89 aa2.5□□□□□ -2.01
SNHG1-220ENST00000544550 FAM25GB3EWG6 89 aa2.5□□□□□ -2.01
SNHG1-220ENST00000544550 GNRH2O43555 120 aa2.5□□□□□ -2.01
SNHG1-220ENST00000544550 ANGP03950 147 aaKnown RBP2.5□□□□□ -2.01
SNHG1-220ENST00000544550 TYMSP04818 313 aa2.5□□□□□ -2.01
SNHG1-220ENST00000544550 AKAIN1P0CW23 69 aa2.5□□□□□ -2.01
SNHG1-220ENST00000544550 GZMBP10144 247 aa2.5□□□□□ -2.01
SNHG1-220ENST00000544550 CAMLGP49069 296 aa2.5□□□□□ -2.01
SNHG1-220ENST00000544550 MRPS10P82664 201 aaKnown RBP2.5□□□□□ -2.01
SNHG1-220ENST00000544550 C15orf54Q8N8G6 183 aa2.5□□□□□ -2.01
SNHG1-220ENST00000544550 OR10G7Q8NGN6 311 aa2.5□□□□□ -2.01
SNHG1-220ENST00000544550 ASB13Q8WXK3 278 aa2.5□□□□□ -2.01
SNHG1-220ENST00000544550 CNBD2Q96M20 576 aa2.5□□□□□ -2.01
SNHG1-220ENST00000544550 C20orf85Q9H1P6 137 aa2.5□□□□□ -2.01
SNHG1-220ENST00000544550 VCX3BQ9H321 246 aa2.5□□□□□ -2.01
SNHG1-220ENST00000544550 RABL2BQ9UNT1 228 aa2.5□□□□□ -2.01
SNHG1-220ENST00000544550 IGLV10-54A0A075B6I4 117 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 IGLV1-50A0A075B6I6 118 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 TRAV6A0A075B6T7 132 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 IGKV2-24A0A0C4DH68 120 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 HPGDSO60760 199 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 ATP6V1G1O75348 118 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 COX6A2Q02221 97 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 ZFP69Q49AA0 526 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 LRRC37A5PQ49AS3 106 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 TMEM128Q5BJH2 165 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 ZNF506Q5JVG8 444 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 FAAP20Q6NZ36 180 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 TMEM14EPQ6UXP3 125 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 CLVS1Q8IUQ0 354 aaPredicted RBP2.49□□□□□ -2.01
SNHG1-220ENST00000544550 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.49□□□□□ -2.01
SNHG1-220ENST00000544550 OR2G3Q8NGZ4 309 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 LYPD6BQ8NI32 183 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 AP3S1Q92572 193 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 SMIM8Q96KF7 97 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 MGST2Q99735 147 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 SOSTQ9BQB4 213 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 PARLQ9H300 379 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 RABL2AQ9UBK7 228 aaPredicted RBP2.49□□□□□ -2.01
SNHG1-220ENST00000544550 EXTL2Q9UBQ6 330 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 FSIP2Q5CZC0 6907 aa2.49□□□□□ -2.01
SNHG1-220ENST00000544550 TRBV6-8A0A0A6YYG3 113 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 TRAV8-4A0A0B4J246 113 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 TRAV1-1A0A0B4J248 108 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 TRBV10-1A0A0K0K1A3 114 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 SSSCA1O60232 199 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 TSC22D2O75157 780 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 P01737 135 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 NBEAP1P0C6P0 100 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 METTL15P1P0C7V9 234 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 PYYP10082 97 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 RPL13AP40429 203 aaKnown RBP2.48□□□□□ -2.01
SNHG1-220ENST00000544550 RPL29P47914 159 aaKnown RBP2.48□□□□□ -2.01
SNHG1-220ENST00000544550 CAV2P51636 162 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 TAS2R30P59541 319 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 S100A10P60903 97 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 CYCSP99999 105 aaKnown RBP2.48□□□□□ -2.01
SNHG1-220ENST00000544550 MPV17L2Q567V2 206 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 MIC13Q5XKP0 118 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 FER1L6-AS1Q8NA97 138 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 OR2T35Q8NGX2 323 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 C9orf85Q96MD7 179 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 SAMD10Q9BYL1 202 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 MIXL1Q9H2W2 232 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 LYRM2Q9NU23 88 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-220ENST00000544550 PRR34Q9NV39 138 aa2.48□□□□□ -2.01
SNHG1-220ENST00000544550 TGFBR1P36897 503 aa2.47□□□□□ -2.01
SNHG1-220ENST00000544550 RPS10P46783 165 aaKnown RBP2.47□□□□□ -2.01
SNHG1-220ENST00000544550 UBE2D1P51668 147 aa2.47□□□□□ -2.01
SNHG1-220ENST00000544550 SPCS2Q15005 226 aa2.47□□□□□ -2.01
SNHG1-220ENST00000544550 LGALSLQ3ZCW2 172 aaPredicted RBP2.47□□□□□ -2.01
SNHG1-220ENST00000544550 TMEM97Q5BJF2 176 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms