RNA–Protein interactions for RNA: ENST00000544299.5

CHERP-202, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-202ENST00000544299 RNASE3P12724 160 aaKnown RBP13.26□□□□□ -0.29
CHERP-202ENST00000544299 IGLL1P15814 213 aa13.26□□□□□ -0.29
CHERP-202ENST00000544299 SSTP61278 116 aa13.26□□□□□ -0.29
CHERP-202ENST00000544299 MRAP2Q96G30 205 aa13.26□□□□□ -0.29
CHERP-202ENST00000544299 SCRT2Q9NQ03 307 aa13.26□□□□□ -0.29
CHERP-202ENST00000544299 MSRB1Q9NZV6 116 aa13.26□□□□□ -0.29
CHERP-202ENST00000544299 IGHV1OR15-1A0A075B7D0 117 aa13.25□□□□□ -0.29
CHERP-202ENST00000544299 WIPF1O43516 503 aa13.25□□□□□ -0.29
CHERP-202ENST00000544299 LINC01545Q5VT33 79 aa13.25□□□□□ -0.29
CHERP-202ENST00000544299 FAM159AQ6UWV7 190 aa13.25□□□□□ -0.29
CHERP-202ENST00000544299 NPYP01303 97 aa13.25□□□□□ -0.29
CHERP-202ENST00000544299 NOTCH3Q9UM47 2321 aa13.24□□□□□ -0.29
CHERP-202ENST00000544299 SPRY2O43597 315 aa13.24□□□□□ -0.29
CHERP-202ENST00000544299 S100A4P26447 101 aaKnown RBP13.24□□□□□ -0.29
CHERP-202ENST00000544299 IGHV3-16A0A0C4DH30 117 aa13.23□□□□□ -0.29
CHERP-202ENST00000544299 TNFRSF6BO95407 300 aa13.23□□□□□ -0.29
CHERP-202ENST00000544299 GIG44P09565 113 aaPredicted RBP13.23□□□□□ -0.29
CHERP-202ENST00000544299 TIMM8BQ9Y5J9 83 aaPredicted RBP13.23□□□□□ -0.29
CHERP-202ENST00000544299 LOC389332A0A1B0GUA5 103 aa13.22□□□□□ -0.29
CHERP-202ENST00000544299 PPP1R17O96001 155 aa13.22□□□□□ -0.29
CHERP-202ENST00000544299 Q8N1Y9 231 aa13.22□□□□□ -0.29
CHERP-202ENST00000544299 SNHG12Q9BXW3 62 aa13.22□□□□□ -0.29
CHERP-202ENST00000544299 MRPS16Q9Y3D3 137 aaKnown RBP13.22□□□□□ -0.29
CHERP-202ENST00000544299 STAB1Q9NY15 2570 aa13.22□□□□□ -0.29
CHERP-202ENST00000544299 INSP01308 110 aa13.22□□□□□ -0.29
CHERP-202ENST00000544299 HNRNPA3P51991 378 aaKnown RBP13.22□□□□□ -0.29
CHERP-202ENST00000544299 Q8N8P6 123 aa13.22□□□□□ -0.29
CHERP-202ENST00000544299 XCL2Q9UBD3 114 aa13.22□□□□□ -0.29
CHERP-202ENST00000544299 LGALS9BQ3B8N2 356 aa13.21□□□□□ -0.29
CHERP-202ENST00000544299 LGALS9CQ6DKI2 356 aa13.21□□□□□ -0.29
CHERP-202ENST00000544299 Q6ZN92 141 aa13.21□□□□□ -0.29
CHERP-202ENST00000544299 C9orf85Q96MD7 179 aa13.21□□□□□ -0.29
CHERP-202ENST00000544299 MUC4Q99102 2169 aa13.21□□□□□ -0.3
CHERP-202ENST00000544299 K7EMI3 77 aa13.2□□□□□ -0.3
CHERP-202ENST00000544299 NXPH4O95158 308 aa13.2□□□□□ -0.3
CHERP-202ENST00000544299 MDFICQ9P1T7 246 aa13.2□□□□□ -0.3
CHERP-202ENST00000544299 PHLDA3Q9Y5J5 127 aa13.2□□□□□ -0.3
CHERP-202ENST00000544299 RPL35AP18077 110 aaKnown RBP13.2□□□□□ -0.3
CHERP-202ENST00000544299 FCER1GP30273 86 aa13.2□□□□□ -0.3
CHERP-202ENST00000544299 LINC00173Q6ZV60 143 aa13.2□□□□□ -0.3
CHERP-202ENST00000544299 GTSCR1Q86UQ5 136 aa13.2□□□□□ -0.3
CHERP-202ENST00000544299 ATOH7Q8N100 152 aa13.2□□□□□ -0.3
CHERP-202ENST00000544299 C1orf158Q8N1D5 194 aa13.2□□□□□ -0.3
CHERP-202ENST00000544299 LINC00467Q9BRT7 94 aa13.2□□□□□ -0.3
CHERP-202ENST00000544299 DPH3P1Q9H4G8 78 aa13.2□□□□□ -0.3
CHERP-202ENST00000544299 A0A096LNJ9 63 aa13.19□□□□□ -0.3
CHERP-202ENST00000544299 M0R381 172 aa13.19□□□□□ -0.3
CHERP-202ENST00000544299 EREGO14944 169 aa13.19□□□□□ -0.3
CHERP-202ENST00000544299 NCR2O95944 276 aa13.19□□□□□ -0.3
CHERP-202ENST00000544299 PRM2P04554 102 aa13.19□□□□□ -0.3
CHERP-202ENST00000544299 EVI2AP22794 236 aa13.19□□□□□ -0.3
CHERP-202ENST00000544299 PMCHL2Q9BQD1 86 aa13.19□□□□□ -0.3
CHERP-202ENST00000544299 SMKR1H3BMG3 65 aa13.18□□□□□ -0.3
CHERP-202ENST00000544299 AP1S3Q96PC3 154 aa13.18□□□□□ -0.3
CHERP-202ENST00000544299 TRRAPQ9Y4A5 3859 aa13.18□□□□□ -0.3
CHERP-202ENST00000544299 TRGV11A0A075B6L2 103 aa13.17□□□□□ -0.3
CHERP-202ENST00000544299 NUTF2P61970 127 aaKnown RBP13.17□□□□□ -0.3
CHERP-202ENST00000544299 IFI27L1Q96BM0 104 aa13.17□□□□□ -0.3
CHERP-202ENST00000544299 C20orf78Q9BR46 151 aa13.17□□□□□ -0.3
CHERP-202ENST00000544299 CBY3A6NI87 242 aa13.17□□□□□ -0.3
CHERP-202ENST00000544299 LINC01587Q99440 93 aa13.17□□□□□ -0.3
CHERP-202ENST00000544299 ZMAT5Q9UDW3 170 aaKnown RBP13.16□□□□□ -0.3
CHERP-202ENST00000544299 COL6A5A8TX70 2615 aa13.16□□□□□ -0.3
CHERP-202ENST00000544299 ATP5LO75964 103 aa13.15□□□□□ -0.3
CHERP-202ENST00000544299 MORN3Q6PF18 240 aaPredicted RBP13.15□□□□□ -0.3
CHERP-202ENST00000544299 NRACQ8N912 160 aa13.15□□□□□ -0.3
CHERP-202ENST00000544299 OXLD1Q5BKU9 147 aa13.15□□□□□ -0.31
CHERP-202ENST00000544299 COL5A1-AS1Q5SY13 56 aa13.15□□□□□ -0.31
CHERP-202ENST00000544299 CSNK1G2-AS1Q8NCQ2 148 aa13.15□□□□□ -0.31
CHERP-202ENST00000544299 GOLT1BQ9Y3E0 138 aa13.15□□□□□ -0.31
CHERP-202ENST00000544299 IGLV2-18A0A075B6J9 118 aa13.14□□□□□ -0.31
CHERP-202ENST00000544299 A0A1B0GV90 55 aa13.14□□□□□ -0.31
CHERP-202ENST00000544299 HTN1P15515 57 aa13.14□□□□□ -0.31
CHERP-202ENST00000544299 LAGE3Q14657 143 aa13.14□□□□□ -0.31
CHERP-202ENST00000544299 SLC25A34Q6PIV7 304 aa13.14□□□□□ -0.31
CHERP-202ENST00000544299 POM121L12Q8N7R1 296 aa13.14□□□□□ -0.31
CHERP-202ENST00000544299 C11orf72Q8NBR9 251 aa13.14□□□□□ -0.31
CHERP-202ENST00000544299 LINC01549A6NIU2 74 aa13.13□□□□□ -0.31
CHERP-202ENST00000544299 G0S2P27469 103 aa13.13□□□□□ -0.31
CHERP-202ENST00000544299 MAJINQ3KP22 176 aa13.13□□□□□ -0.31
CHERP-202ENST00000544299 SMIM17P0DL12 118 aa13.12□□□□□ -0.31
CHERP-202ENST00000544299 ORMDL2Q53FV1 153 aa13.12□□□□□ -0.31
CHERP-202ENST00000544299 GAS8-AS1O95177 125 aa13.12□□□□□ -0.31
CHERP-202ENST00000544299 AZU1P20160 251 aa13.12□□□□□ -0.31
CHERP-202ENST00000544299 SYT8Q8NBV8 401 aa13.12□□□□□ -0.31
CHERP-202ENST00000544299 KIF25-AS1Q9Y6Z4 181 aa13.12□□□□□ -0.31
CHERP-202ENST00000544299 H0Y8G0 127 aa13.11□□□□□ -0.31
CHERP-202ENST00000544299 KRTAP10-11P60412 298 aa13.11□□□□□ -0.31
CHERP-202ENST00000544299 RPL32P62910 135 aaKnown RBP13.11□□□□□ -0.31
CHERP-202ENST00000544299 TMEM208Q9BTX3 173 aa13.11□□□□□ -0.31
CHERP-202ENST00000544299 SMIM2Q9BVW6 85 aa13.11□□□□□ -0.31
CHERP-202ENST00000544299 C1QTNF4Q9BXJ3 329 aa13.11□□□□□ -0.31
CHERP-202ENST00000544299 JPT2Q9H910 190 aa13.11□□□□□ -0.31
CHERP-202ENST00000544299 IGHV3OR16-12A0A075B7B8 117 aa13.1□□□□□ -0.31
CHERP-202ENST00000544299 ZNF415Q09FC8 603 aa13.1□□□□□ -0.31
CHERP-202ENST00000544299 C14orf178Q8N769 122 aaPredicted RBP13.1□□□□□ -0.31
CHERP-202ENST00000544299 hDV102S1A0JD36 115 aa13.09□□□□□ -0.31
CHERP-202ENST00000544299 LINC00315P59091 139 aa13.09□□□□□ -0.31
CHERP-202ENST00000544299 SUMO2P61956 95 aaKnown RBP13.09□□□□□ -0.31
CHERP-202ENST00000544299 EGFEM1PQ0D2K5 195 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms