RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 ZFP2Q6ZN57 461 aa9.53□□□□□ -0.88
SP140-213ENST00000543928 VSIG2Q96IQ7 327 aa9.53□□□□□ -0.88
SP140-213ENST00000543928 SEC11CQ9BY50 192 aa9.53□□□□□ -0.88
SP140-213ENST00000543928 PAX4O43316 350 aa9.52□□□□□ -0.89
SP140-213ENST00000543928 NUDT3O95989 172 aa9.52□□□□□ -0.89
SP140-213ENST00000543928 CRYGDP07320 174 aa9.52□□□□□ -0.89
SP140-213ENST00000543928 GATA1P15976 413 aaPredicted RBP9.52□□□□□ -0.89
SP140-213ENST00000543928 UFSP1Q6NVU6 142 aa9.52□□□□□ -0.89
SP140-213ENST00000543928 C15orf53Q8NAA6 179 aa9.52□□□□□ -0.89
SP140-213ENST00000543928 PGLYRP4Q96LB8 373 aa9.52□□□□□ -0.89
SP140-213ENST00000543928 GFRA4Q9GZZ7 299 aa9.52□□□□□ -0.89
SP140-213ENST00000543928 MSRB1Q9NZV6 116 aa9.52□□□□□ -0.89
SP140-213ENST00000543928 FAM231BA6NCW3 169 aa9.51□□□□□ -0.89
SP140-213ENST00000543928 HIGD1CA8MV81 97 aa9.51□□□□□ -0.89
SP140-213ENST00000543928 H3BNG1 76 aa9.51□□□□□ -0.89
SP140-213ENST00000543928 RHODO00212 210 aa9.51□□□□□ -0.89
SP140-213ENST00000543928 NTF3P20783 257 aa9.51□□□□□ -0.89
SP140-213ENST00000543928 FOXA3P55318 350 aaPredicted RBP9.51□□□□□ -0.89
SP140-213ENST00000543928 WDR73Q6P4I2 378 aa9.51□□□□□ -0.89
SP140-213ENST00000543928 C14orf178Q8N769 122 aaPredicted RBP9.51□□□□□ -0.89
SP140-213ENST00000543928 AP1S3Q96PC3 154 aa9.51□□□□□ -0.89
SP140-213ENST00000543928 CNFNQ9BYD5 112 aa9.51□□□□□ -0.89
SP140-213ENST00000543928 ALMS1Q8TCU4 4167 aa9.51□□□□□ -0.89
SP140-213ENST00000543928 TWIST1Q15672 202 aa9.5□□□□□ -0.89
SP140-213ENST00000543928 RNF212Q495C1 297 aa9.5□□□□□ -0.89
SP140-213ENST00000543928 Q6ZSN1 163 aa9.5□□□□□ -0.89
SP140-213ENST00000543928 SLC25A29Q8N8R3 303 aa9.5□□□□□ -0.89
SP140-213ENST00000543928 TRBV6-4A0A1B0GX49 114 aa9.49□□□□□ -0.89
SP140-213ENST00000543928 SMIM27A0A1W2PRY6 76 aa9.49□□□□□ -0.89
SP140-213ENST00000543928 PPP1R2P9O14990 202 aa9.49□□□□□ -0.89
SP140-213ENST00000543928 MT-ND4LP03901 98 aa9.49□□□□□ -0.89
SP140-213ENST00000543928 TRGC1P0CF51 173 aa9.49□□□□□ -0.89
SP140-213ENST00000543928 SMIM17P0DL12 118 aa9.49□□□□□ -0.89
SP140-213ENST00000543928 C10orf91Q5T1B1 145 aa9.49□□□□□ -0.89
SP140-213ENST00000543928 NUP35Q8NFH5 326 aa9.49□□□□□ -0.89
SP140-213ENST00000543928 BORCS7Q96B45 105 aa9.49□□□□□ -0.89
SP140-213ENST00000543928 NAT8BQ9UHF3 227 aa9.49□□□□□ -0.89
SP140-213ENST00000543928 DNAH1Q9P2D7 4330 aa9.48□□□□□ -0.89
SP140-213ENST00000543928 LOC100131303A0A0U1RQF7 123 aa9.48□□□□□ -0.89
SP140-213ENST00000543928 A0A1B0GUT8 65 aa9.48□□□□□ -0.89
SP140-213ENST00000543928 GYPEP15421 78 aa9.48□□□□□ -0.89
SP140-213ENST00000543928 EVI2AP22794 236 aa9.48□□□□□ -0.89
SP140-213ENST00000543928 RHOHQ15669 191 aa9.48□□□□□ -0.89
SP140-213ENST00000543928 ZNF56Q15929 161 aa9.48□□□□□ -0.89
SP140-213ENST00000543928 ANAPC16Q96DE5 110 aa9.48□□□□□ -0.89
SP140-213ENST00000543928 LYSTQ99698 3801 aa9.48□□□□□ -0.89
SP140-213ENST00000543928 PRADC1Q9BSG0 188 aa9.48□□□□□ -0.89
SP140-213ENST00000543928 CARHSP1Q9Y2V2 147 aaKnown RBP9.48□□□□□ -0.89
SP140-213ENST00000543928 ICOSQ9Y6W8 199 aa9.48□□□□□ -0.89
SP140-213ENST00000543928 KIF25-AS1Q9Y6Z4 181 aa9.48□□□□□ -0.89
SP140-213ENST00000543928 A0A096LPF7 62 aa9.47□□□□□ -0.89
SP140-213ENST00000543928 K7EQD1 137 aa9.47□□□□□ -0.89
SP140-213ENST00000543928 MRPL23Q16540 153 aaKnown RBP9.47□□□□□ -0.89
SP140-213ENST00000543928 LINC00476Q8WZB0 136 aa9.47□□□□□ -0.89
SP140-213ENST00000543928 F5H697 171 aa9.46□□□□□ -0.9
SP140-213ENST00000543928 MGPP08493 103 aa9.46□□□□□ -0.9
SP140-213ENST00000543928 LINC00315P59091 139 aa9.46□□□□□ -0.9
SP140-213ENST00000543928 RAB4BP61018 213 aa9.46□□□□□ -0.9
SP140-213ENST00000543928 LGALS9CQ6DKI2 356 aa9.46□□□□□ -0.9
SP140-213ENST00000543928 SLC7A5P1Q8MH63 180 aa9.46□□□□□ -0.9
SP140-213ENST00000543928 VPS13DQ5THJ4 4388 aa9.45□□□□□ -0.9
SP140-213ENST00000543928 LCE6AA0A183 80 aa9.45□□□□□ -0.9
SP140-213ENST00000543928 LY6G6CO95867 125 aa9.45□□□□□ -0.9
SP140-213ENST00000543928 P0DMU3 169 aa9.45□□□□□ -0.9
SP140-213ENST00000543928 FAM231AP0DMU4 169 aa9.45□□□□□ -0.9
SP140-213ENST00000543928 FAM231CP0DMU5 169 aa9.45□□□□□ -0.9
SP140-213ENST00000543928 SRIP30626 198 aa9.45□□□□□ -0.9
SP140-213ENST00000543928 RIGQ13278 110 aa9.45□□□□□ -0.9
SP140-213ENST00000543928 SMIM15Q7Z3B0 74 aa9.45□□□□□ -0.9
SP140-213ENST00000543928 DPH3P1Q9H4G8 78 aa9.45□□□□□ -0.9
SP140-213ENST00000543928 SACSQ9NZJ4 4579 aa9.44□□□□□ -0.9
SP140-213ENST00000543928 NEGR1Q7Z3B1 354 aa9.44□□□□□ -0.9
SP140-213ENST00000543928 UBE2DNLQ8IWF7 75 aa9.44□□□□□ -0.9
SP140-213ENST00000543928 Q9UF83 564 aa9.44□□□□□ -0.9
SP140-213ENST00000543928 GAGE12JA6NER3 117 aa9.43□□□□□ -0.9
SP140-213ENST00000543928 APOC3P02656 99 aa9.43□□□□□ -0.9
SP140-213ENST00000543928 CCL18P55774 89 aa9.43□□□□□ -0.9
SP140-213ENST00000543928 GAGE1Q13065 139 aa9.43□□□□□ -0.9
SP140-213ENST00000543928 GAGE4Q13068 117 aa9.43□□□□□ -0.9
SP140-213ENST00000543928 GAGE5Q13069 117 aa9.43□□□□□ -0.9
SP140-213ENST00000543928 NDUFA5Q16718 116 aa9.43□□□□□ -0.9
SP140-213ENST00000543928 ESRGQ1W209 222 aa9.43□□□□□ -0.9
SP140-213ENST00000543928 GAGE13Q4V321 117 aa9.43□□□□□ -0.9
SP140-213ENST00000543928 CLRN3Q8NCR9 226 aa9.43□□□□□ -0.9
SP140-213ENST00000543928 CTDSP1Q9GZU7 261 aa9.43□□□□□ -0.9
SP140-213ENST00000543928 TRBV10-1A0A0K0K1A3 114 aa9.42□□□□□ -0.9
SP140-213ENST00000543928 C7orf77A4D0Y5 90 aa9.42□□□□□ -0.9
SP140-213ENST00000543928 FAM3BP58499 235 aaPredicted RBP9.42□□□□□ -0.9
SP140-213ENST00000543928 SUMO4Q6EEV6 95 aa9.42□□□□□ -0.9
SP140-213ENST00000543928 MRPL54Q6P161 138 aaKnown RBP9.42□□□□□ -0.9
SP140-213ENST00000543928 TMEM191AQ9H0A3 160 aa9.42□□□□□ -0.9
SP140-213ENST00000543928 LINC00588Q9Y4M8 146 aa9.42□□□□□ -0.9
SP140-213ENST00000543928 KMT2CQ8NEZ4 4911 aaKnown RBP9.42□□□□□ -0.9
SP140-213ENST00000543928 LINC00694P0DN24 101 aa9.41□□□□□ -0.9
SP140-213ENST00000543928 CAMPP49913 170 aa9.41□□□□□ -0.9
SP140-213ENST00000543928 RHEBQ15382 184 aa9.41□□□□□ -0.9
SP140-213ENST00000543928 SH2D6Q7Z4S9 175 aa9.41□□□□□ -0.9
SP140-213ENST00000543928 A0A1B0GW15 77 aa9.4□□□□□ -0.9
SP140-213ENST00000543928 H7C1H1 209 aa9.4□□□□□ -0.9
SP140-213ENST00000543928 M0QY20 66 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 383.5 ms