RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 ABCA12Q86UK0 2595 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 C2orf70A6NJV1 201 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 NDUFS5O43920 106 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 ATP5G1P05496 136 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 CXCL1P09341 107 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 LINC01620Q4KN68 170 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 NACAE9PAV3 2078 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 MED12LQ86YW9 2145 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 CCL25O15444 150 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 CTSGP08311 255 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 HLA-DMBP28068 263 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 C2orf66Q6UXQ4 117 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 RITA1Q96K30 269 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 AGPAT4-IT1Q9H0P7 198 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 INS-IGF2F8WCM5 200 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 FAM104BQ5XKR9 115 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 C4orf3Q8WVX3 66 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 WDR87Q6ZQQ6 2873 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 A6NDX4 124 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 I3L2K1 104 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 PLA2G2AP14555 144 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 OBSL1O75147 1896 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 IGKV2D-24A0A075B6R9 120 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 IGKV1-17P01599 117 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 PLA2G2EQ9NZK7 142 aa5.36□□□□□ -1.55
SRGAP1-206ENST00000543397 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 ZC2HC1BQ5TFG8 222 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 MORN5Q5VZ52 161 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 DYNAPQ8N1N2 210 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 CYYR1Q96J86 154 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 DENND4AQ7Z401 1863 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 CHD3Q12873 2000 aaKnown RBP5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 LEPROTO15243 131 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 HLA-DRB4P13762 266 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 GPHB5Q86YW7 130 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 NKAPP1Q8N9T2 125 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 C16orf74Q96GX8 76 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 C17orf77Q96MU5 243 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 HLA-DRB4X5D2U9 266 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 IGKV1OR2-108A0A075B7D4 117 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 K7EMT4 169 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 CHAC1Q9BUX1 264 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 Q9HAA7 133 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 USP9XQ93008 2570 aaPredicted RBP5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 VWC2LB2RUY7 222 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 DEFB135Q30KP9 77 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 ZC2HC1AQ96GY0 325 aa5.35□□□□□ -1.55
SRGAP1-206ENST00000543397 IGHV1-24A0A0C4DH33 117 aa5.34□□□□□ -1.55
SRGAP1-206ENST00000543397 C22orf34Q6ZV56 151 aa5.34□□□□□ -1.55
SRGAP1-206ENST00000543397 ODF3L1Q8IXM7 274 aa5.34□□□□□ -1.55
SRGAP1-206ENST00000543397 ZNF625Q96I27 306 aaPredicted RBP5.34□□□□□ -1.55
SRGAP1-206ENST00000543397 MLST8Q9BVC4 326 aa5.34□□□□□ -1.55
SRGAP1-206ENST00000543397 SRCAPQ6ZRS2 3230 aa5.34□□□□□ -1.55
SRGAP1-206ENST00000543397 RBAKDNA6NC62 111 aa5.34□□□□□ -1.55
SRGAP1-206ENST00000543397 CDK2AP2O75956 126 aa5.34□□□□□ -1.55
SRGAP1-206ENST00000543397 TMEM141Q96I45 108 aa5.34□□□□□ -1.55
SRGAP1-206ENST00000543397 TIMM17AQ99595 171 aa5.34□□□□□ -1.55
SRGAP1-206ENST00000543397 KLK5Q9Y337 293 aaPredicted RBP5.34□□□□□ -1.55
SRGAP1-206ENST00000543397 C2CD3Q4AC94 2353 aa5.34□□□□□ -1.55
SRGAP1-206ENST00000543397 H3BMG7 143 aa5.34□□□□□ -1.55
SRGAP1-206ENST00000543397 H3BMM0 161 aa5.34□□□□□ -1.55
SRGAP1-206ENST00000543397 UBE2WQ96B02 151 aa5.34□□□□□ -1.55
SRGAP1-206ENST00000543397 TRAV26-2A0A0B4J265 109 aa5.34□□□□□ -1.56
SRGAP1-206ENST00000543397 FAM229AH3BQW9 127 aa5.34□□□□□ -1.56
SRGAP1-206ENST00000543397 ZNF726P1Q15940 193 aa5.34□□□□□ -1.56
SRGAP1-206ENST00000543397 PYY3Q5JQD4 70 aa5.34□□□□□ -1.56
SRGAP1-206ENST00000543397 Q8N8P6 123 aa5.34□□□□□ -1.56
SRGAP1-206ENST00000543397 ICOSQ9Y6W8 199 aa5.34□□□□□ -1.56
SRGAP1-206ENST00000543397 GNRH2O43555 120 aa5.33□□□□□ -1.56
SRGAP1-206ENST00000543397 PFN2P35080 140 aa5.33□□□□□ -1.56
SRGAP1-206ENST00000543397 CLPSL2Q6UWE3 100 aa5.33□□□□□ -1.56
SRGAP1-206ENST00000543397 NDUFA11Q86Y39 141 aa5.33□□□□□ -1.56
SRGAP1-206ENST00000543397 H3BUT2 72 aa5.33□□□□□ -1.56
SRGAP1-206ENST00000543397 RBM3P98179 157 aaKnown RBP5.33□□□□□ -1.56
SRGAP1-206ENST00000543397 SH2D6Q7Z4S9 175 aa5.33□□□□□ -1.56
SRGAP1-206ENST00000543397 TMEM61Q8N0U2 210 aa5.33□□□□□ -1.56
SRGAP1-206ENST00000543397 HIST1H2BLQ99880 126 aa5.33□□□□□ -1.56
SRGAP1-206ENST00000543397 Q6YL49 198 aa5.33□□□□□ -1.56
SRGAP1-206ENST00000543397 LY6G6DO95868 133 aa5.33□□□□□ -1.56
SRGAP1-206ENST00000543397 MRPL51Q4U2R6 128 aaKnown RBP5.33□□□□□ -1.56
SRGAP1-206ENST00000543397 CEP192Q8TEP8 1941 aa5.33□□□□□ -1.56
SRGAP1-206ENST00000543397 ATXN8Q156A1 80 aa5.32□□□□□ -1.56
SRGAP1-206ENST00000543397 NEGR1Q7Z3B1 354 aa5.32□□□□□ -1.56
SRGAP1-206ENST00000543397 SMIM2Q9BVW6 85 aa5.32□□□□□ -1.56
SRGAP1-206ENST00000543397 PRSS29PA6NIE9 313 aa5.32□□□□□ -1.56
SRGAP1-206ENST00000543397 SYS1-DBNDD2H3BUS1 97 aa5.32□□□□□ -1.56
SRGAP1-206ENST00000543397 IGF1P05019 195 aa5.32□□□□□ -1.56
SRGAP1-206ENST00000543397 C11orf52Q96A22 123 aa5.32□□□□□ -1.56
SRGAP1-206ENST00000543397 USP9YO00507 2555 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-206ENST00000543397 COLCA2A8K830 154 aa5.32□□□□□ -1.56
SRGAP1-206ENST00000543397 Q6ZQT7 251 aa5.32□□□□□ -1.56
SRGAP1-206ENST00000543397 FSTL3O95633 263 aa5.32□□□□□ -1.56
SRGAP1-206ENST00000543397 GATA1P15976 413 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-206ENST00000543397 ODF3BA8MYP8 253 aa5.31□□□□□ -1.56
SRGAP1-206ENST00000543397 F8W735 103 aaPredicted RBP5.31□□□□□ -1.56
SRGAP1-206ENST00000543397 NXPH4O95158 308 aa5.31□□□□□ -1.56
SRGAP1-206ENST00000543397 IGHG4P01861 327 aa5.31□□□□□ -1.56
SRGAP1-206ENST00000543397 ATP6V0E2Q8NHE4 81 aa5.31□□□□□ -1.56
SRGAP1-206ENST00000543397 LTAP01374 205 aa5.31□□□□□ -1.56
SRGAP1-206ENST00000543397 C3orf79P0CE67 100 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms