RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 DPH3P1Q9H4G8 78 aa20.05■□□□□ 0.8
CCM2-218ENST00000541586 JPT2Q9H910 190 aa20.05■□□□□ 0.8
CCM2-218ENST00000541586 SMKR1H3BMG3 65 aa20.04■□□□□ 0.8
CCM2-218ENST00000541586 ZNF876PQ49A33 203 aa20.04■□□□□ 0.8
CCM2-218ENST00000541586 RETNQ9HD89 108 aa20.04■□□□□ 0.8
CCM2-218ENST00000541586 NUPR1O60356 82 aa20.03■□□□□ 0.8
CCM2-218ENST00000541586 SERF1AO75920 110 aa20.03■□□□□ 0.8
CCM2-218ENST00000541586 NCR2O95944 276 aa20.03■□□□□ 0.8
CCM2-218ENST00000541586 ZNF705AQ6ZN79 300 aaPredicted RBP20.03■□□□□ 0.8
CCM2-218ENST00000541586 DNAH9Q9NYC9 4486 aa20.03■□□□□ 0.8
CCM2-218ENST00000541586 PRELID3AQ96N28 172 aa20.02■□□□□ 0.8
CCM2-218ENST00000541586 Q6ZWC4 215 aa20.02■□□□□ 0.79
CCM2-218ENST00000541586 RNASE8Q8TDE3 154 aaKnown RBP20.02■□□□□ 0.79
CCM2-218ENST00000541586 KIF25-AS1Q9Y6Z4 181 aa20.02■□□□□ 0.79
CCM2-218ENST00000541586 IFITM10A6NMD0 228 aa20.01■□□□□ 0.79
CCM2-218ENST00000541586 M0R2P5 195 aa20.01■□□□□ 0.79
CCM2-218ENST00000541586 PPBPP02775 128 aa20.01■□□□□ 0.79
CCM2-218ENST00000541586 GAS8-AS1O95177 125 aa20■□□□□ 0.79
CCM2-218ENST00000541586 TMEM263Q8WUH6 116 aaKnown RBP20■□□□□ 0.79
CCM2-218ENST00000541586 SPXQ9BT56 116 aa20■□□□□ 0.79
CCM2-218ENST00000541586 ZMAT4Q9H898 229 aa20■□□□□ 0.79
CCM2-218ENST00000541586 TRAV26-2A0A0B4J265 109 aa19.99■□□□□ 0.79
CCM2-218ENST00000541586 SMIM17P0DL12 118 aa19.99■□□□□ 0.79
CCM2-218ENST00000541586 SPATA25Q9BR10 227 aa19.99■□□□□ 0.79
CCM2-218ENST00000541586 TM2D3Q9BRN9 247 aa19.99■□□□□ 0.79
CCM2-218ENST00000541586 A0A087WWL8 130 aa19.98■□□□□ 0.79
CCM2-218ENST00000541586 MGPP08493 103 aa19.98■□□□□ 0.79
CCM2-218ENST00000541586 LINC00315P59091 139 aa19.98■□□□□ 0.79
CCM2-218ENST00000541586 IL17DQ8TAD2 202 aa19.98■□□□□ 0.79
CCM2-218ENST00000541586 PTH2Q96A98 100 aa19.98■□□□□ 0.79
CCM2-218ENST00000541586 RNF183Q96D59 192 aa19.98■□□□□ 0.79
CCM2-218ENST00000541586 NPYP01303 97 aa19.97■□□□□ 0.79
CCM2-218ENST00000541586 ESDP10768 282 aa19.97■□□□□ 0.79
CCM2-218ENST00000541586 GATA1P15976 413 aaPredicted RBP19.97■□□□□ 0.79
CCM2-218ENST00000541586 S100A2P29034 98 aa19.97■□□□□ 0.79
CCM2-218ENST00000541586 OVOL2Q9BRP0 275 aa19.97■□□□□ 0.79
CCM2-218ENST00000541586 POM121L12Q8N7R1 296 aa19.96■□□□□ 0.79
CCM2-218ENST00000541586 MRAP2Q96G30 205 aa19.96■□□□□ 0.79
CCM2-218ENST00000541586 SAMD10Q9BYL1 202 aa19.96■□□□□ 0.79
CCM2-218ENST00000541586 HUWE1Q7Z6Z7 4374 aaKnown RBP19.96■□□□□ 0.79
CCM2-218ENST00000541586 PIK3CD-AS1Q5SR53 167 aa19.96■□□□□ 0.79
CCM2-218ENST00000541586 CRYGDP07320 174 aa19.95■□□□□ 0.78
CCM2-218ENST00000541586 RRN3P1Q2M238 152 aa19.95■□□□□ 0.78
CCM2-218ENST00000541586 NIT1Q86X76 327 aa19.95■□□□□ 0.78
CCM2-218ENST00000541586 C16orf74Q96GX8 76 aa19.95■□□□□ 0.78
CCM2-218ENST00000541586 URB1-AS1Q96HZ7 61 aa19.95■□□□□ 0.78
CCM2-218ENST00000541586 FAM74A4Q5TZK3 123 aa19.94■□□□□ 0.78
CCM2-218ENST00000541586 OR11H2Q8NH07 326 aa19.94■□□□□ 0.78
CCM2-218ENST00000541586 HIST1H2BLQ99880 126 aa19.94■□□□□ 0.78
CCM2-218ENST00000541586 MRPL16Q9NX20 251 aaKnown RBP19.94■□□□□ 0.78
CCM2-218ENST00000541586 LAMTOR2Q9Y2Q5 125 aa19.94■□□□□ 0.78
CCM2-218ENST00000541586 TNFRSF6BO95407 300 aa19.93■□□□□ 0.78
CCM2-218ENST00000541586 NHLRC4P0CG21 123 aaPredicted RBP19.93■□□□□ 0.78
CCM2-218ENST00000541586 FABP4P15090 132 aa19.93■□□□□ 0.78
CCM2-218ENST00000541586 RNASEKQ6P5S7 137 aaKnown RBP19.93■□□□□ 0.78
CCM2-218ENST00000541586 NRACQ8N912 160 aa19.93■□□□□ 0.78
CCM2-218ENST00000541586 PLAC8L1A1L4L8 177 aa19.92■□□□□ 0.78
CCM2-218ENST00000541586 AKR1D1P51857 326 aa19.92■□□□□ 0.78
CCM2-218ENST00000541586 TP53TG1Q9Y2A0 90 aa19.92■□□□□ 0.78
CCM2-218ENST00000541586 LOC389332A0A1B0GUA5 103 aa19.91■□□□□ 0.78
CCM2-218ENST00000541586 RASL10AQ92737 203 aa19.91■□□□□ 0.78
CCM2-218ENST00000541586 A8MWV9 139 aa19.9■□□□□ 0.78
CCM2-218ENST00000541586 LINC00614P0C842 121 aa19.9■□□□□ 0.78
CCM2-218ENST00000541586 DAZ2Q13117 558 aaKnown RBP19.9■□□□□ 0.78
CCM2-218ENST00000541586 F5H697 171 aa19.89■□□□□ 0.77
CCM2-218ENST00000541586 IFI27P40305 119 aaPredicted RBP19.89■□□□□ 0.77
CCM2-218ENST00000541586 PRSS3P2Q8NHM4 247 aa19.89■□□□□ 0.77
CCM2-218ENST00000541586 TMEM18Q96B42 140 aa19.89■□□□□ 0.77
CCM2-218ENST00000541586 NOP10Q9NPE3 64 aaKnown RBP19.89■□□□□ 0.77
CCM2-218ENST00000541586 X6R8D5 127 aa19.89■□□□□ 0.77
CCM2-218ENST00000541586 SUMO4Q6EEV6 95 aa19.88■□□□□ 0.77
CCM2-218ENST00000541586 CHCHD1Q96BP2 118 aaKnown RBP19.88■□□□□ 0.77
CCM2-218ENST00000541586 NDUFAF3Q9BU61 184 aa19.88■□□□□ 0.77
CCM2-218ENST00000541586 MAP1LC3AQ9H492 121 aa19.88■□□□□ 0.77
CCM2-218ENST00000541586 TRGV1A0A0A0MS02 117 aa19.88■□□□□ 0.77
CCM2-218ENST00000541586 ZNF56Q15929 161 aa19.88■□□□□ 0.77
CCM2-218ENST00000541586 CFAP126Q5VTH2 177 aa19.88■□□□□ 0.77
CCM2-218ENST00000541586 COL7A1Q02388 2944 aa19.87■□□□□ 0.77
CCM2-218ENST00000541586 HSBP1O75506 76 aa19.86■□□□□ 0.77
CCM2-218ENST00000541586 UFSP1Q6NVU6 142 aa19.86■□□□□ 0.77
CCM2-218ENST00000541586 Q6ZTI0 123 aa19.86■□□□□ 0.77
CCM2-218ENST00000541586 RPL39LQ96EH5 51 aaKnown RBP19.86■□□□□ 0.77
CCM2-218ENST00000541586 PMCHP20382 165 aa19.85■□□□□ 0.77
CCM2-218ENST00000541586 LGALS9BQ3B8N2 356 aa19.85■□□□□ 0.77
CCM2-218ENST00000541586 FA2HQ7L5A8 372 aa19.85■□□□□ 0.77
CCM2-218ENST00000541586 FAM19A2Q8N3H0 131 aa19.85■□□□□ 0.77
CCM2-218ENST00000541586 PACRGQ96M98 296 aaPredicted RBP19.85■□□□□ 0.77
CCM2-218ENST00000541586 SMIM9A6NGZ8 99 aa19.85■□□□□ 0.77
CCM2-218ENST00000541586 RS1O15537 224 aa19.85■□□□□ 0.77
CCM2-218ENST00000541586 AMTP48728 403 aa19.85■□□□□ 0.77
CCM2-218ENST00000541586 OR10D4PQ8NGN7 298 aa19.85■□□□□ 0.77
CCM2-218ENST00000541586 IGHV3-73A0A0B4J1V6 119 aa19.84■□□□□ 0.77
CCM2-218ENST00000541586 DEFB4AO15263 64 aa19.84■□□□□ 0.77
CCM2-218ENST00000541586 PRSS47A8MTI9 375 aa19.83■□□□□ 0.77
CCM2-218ENST00000541586 AP5S1Q9NUS5 200 aa19.83■□□□□ 0.77
CCM2-218ENST00000541586 TENM3Q9P273 2699 aa19.82■□□□□ 0.76
CCM2-218ENST00000541586 PPP1R17O96001 155 aa19.82■□□□□ 0.76
CCM2-218ENST00000541586 NACAE9PAV3 2078 aa19.82■□□□□ 0.76
CCM2-218ENST00000541586 M0QY20 66 aa19.81■□□□□ 0.76
CCM2-218ENST00000541586 EMP1P54849 157 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms