RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 SPTBP11277 2137 aa0.52□□□□□ -2.33
PRKDC-210ENST00000541488 TRAV3A0A0B4J244 114 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 NUPR2A6NF83 97 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 CCDC160A6NGH7 325 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 DHFRP00374 187 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 SPRR2DP22532 72 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 CRYGSP22914 178 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 RNASE4P34096 147 aaKnown RBP0.51□□□□□ -2.33
PRKDC-210ENST00000541488 PIGPP57054 158 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 ERVS71-1P61550 626 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 KRR1Q13601 381 aaKnown RBP0.51□□□□□ -2.33
PRKDC-210ENST00000541488 RRN3P1Q2M238 152 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 TEX261Q6UWH6 196 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 GKN2Q86XP6 184 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 SLC30A7Q8NEW0 376 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 OR4S1Q8NGB4 309 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 SLAMF6Q96DU3 332 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 AMELYQ99218 206 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 GPER1Q99527 375 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 PRADC1Q9BSG0 188 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 IMUPQ9GZP8 106 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 CDC42SE1Q9NRR8 79 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 ARL2BPQ9Y2Y0 163 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 U3KQ87 197 aa0.51□□□□□ -2.33
PRKDC-210ENST00000541488 A8MWV9 139 aa0.5□□□□□ -2.33
PRKDC-210ENST00000541488 KLF7O75840 302 aaPredicted RBP0.5□□□□□ -2.33
PRKDC-210ENST00000541488 IFNA7P01567 189 aa0.5□□□□□ -2.33
PRKDC-210ENST00000541488 IFNA14P01570 189 aa0.5□□□□□ -2.33
PRKDC-210ENST00000541488 CST2P09228 141 aa0.5□□□□□ -2.33
PRKDC-210ENST00000541488 SRIP30626 198 aa0.5□□□□□ -2.33
PRKDC-210ENST00000541488 DYNLT1P63172 113 aa0.5□□□□□ -2.33
PRKDC-210ENST00000541488 REEP5Q00765 189 aa0.5□□□□□ -2.33
PRKDC-210ENST00000541488 FAM74A1Q5RGS3 127 aa0.5□□□□□ -2.33
PRKDC-210ENST00000541488 BCL2L15Q5TBC7 163 aa0.5□□□□□ -2.33
PRKDC-210ENST00000541488 C22orf39Q6P5X5 142 aa0.5□□□□□ -2.33
PRKDC-210ENST00000541488 C2orf82Q6UX34 121 aa0.5□□□□□ -2.33
PRKDC-210ENST00000541488 OR10X1Q8NGY0 326 aa0.5□□□□□ -2.33
PRKDC-210ENST00000541488 NABP2Q9BQ15 211 aa0.5□□□□□ -2.33
PRKDC-210ENST00000541488 TMEM126AQ9H061 195 aa0.5□□□□□ -2.33
PRKDC-210ENST00000541488 SNRNP200O75643 2136 aaKnown RBP0.49□□□□□ -2.33
PRKDC-210ENST00000541488 FAM159BA6NKW6 160 aa0.49□□□□□ -2.33
PRKDC-210ENST00000541488 TMEM210A6NLX4 147 aa0.49□□□□□ -2.33
PRKDC-210ENST00000541488 TIMM17BO60830 172 aa0.49□□□□□ -2.33
PRKDC-210ENST00000541488 GGCTO75223 188 aaKnown RBP0.49□□□□□ -2.33
PRKDC-210ENST00000541488 GADD45GO95257 159 aa0.49□□□□□ -2.33
PRKDC-210ENST00000541488 IFNA6P05013 189 aa0.49□□□□□ -2.33
PRKDC-210ENST00000541488 MT4P47944 62 aa0.49□□□□□ -2.33
PRKDC-210ENST00000541488 MT1HP80294 61 aa0.49□□□□□ -2.33
PRKDC-210ENST00000541488 MYL5Q02045 173 aa0.49□□□□□ -2.33
PRKDC-210ENST00000541488 PDZD9Q8IXQ8 264 aa0.49□□□□□ -2.33
PRKDC-210ENST00000541488 CLECL1Q8IZS7 167 aa0.49□□□□□ -2.33
PRKDC-210ENST00000541488 OR2T35Q8NGX2 323 aa0.49□□□□□ -2.33
PRKDC-210ENST00000541488 CANT1Q8WVQ1 401 aa0.49□□□□□ -2.33
PRKDC-210ENST00000541488 BORCS5Q969J3 196 aa0.49□□□□□ -2.33
PRKDC-210ENST00000541488 TP53RKQ96S44 253 aa0.49□□□□□ -2.33
PRKDC-210ENST00000541488 CHCHD2Q9Y6H1 151 aaPredicted RBP0.49□□□□□ -2.33
PRKDC-210ENST00000541488 FLGP20930 4061 aaPredicted RBP0.48□□□□□ -2.33
PRKDC-210ENST00000541488 TRBV6-4A0A1B0GX49 114 aa0.48□□□□□ -2.33
PRKDC-210ENST00000541488 TCRBV4S1A1TA0A5B7 111 aa0.48□□□□□ -2.33
PRKDC-210ENST00000541488 B4DSR2 109 aa0.48□□□□□ -2.33
PRKDC-210ENST00000541488 NDUFB3O43676 98 aa0.48□□□□□ -2.33
PRKDC-210ENST00000541488 SERPINA1P01009 418 aa0.48□□□□□ -2.33
PRKDC-210ENST00000541488 ZNF25P17030 456 aaPredicted RBP0.48□□□□□ -2.33
PRKDC-210ENST00000541488 ATP5G3P48201 142 aa0.48□□□□□ -2.33
PRKDC-210ENST00000541488 HSPE1P61604 102 aaKnown RBP0.48□□□□□ -2.33
PRKDC-210ENST00000541488 MRPS25P82663 173 aaKnown RBP0.48□□□□□ -2.33
PRKDC-210ENST00000541488 TMED2Q15363 201 aa0.48□□□□□ -2.33
PRKDC-210ENST00000541488 C4orf22Q6V702 233 aa0.48□□□□□ -2.33
PRKDC-210ENST00000541488 GOLT1AQ6ZVE7 132 aa0.48□□□□□ -2.33
PRKDC-210ENST00000541488 PSMF1Q92530 271 aa0.48□□□□□ -2.33
PRKDC-210ENST00000541488 TMEM70Q9BUB7 260 aa0.48□□□□□ -2.33
PRKDC-210ENST00000541488 ENY2Q9NPA8 101 aa0.48□□□□□ -2.33
PRKDC-210ENST00000541488 ORMDL1Q9P0S3 153 aa0.48□□□□□ -2.33
PRKDC-210ENST00000541488 TMEM14CQ9P0S9 112 aa0.48□□□□□ -2.33
PRKDC-210ENST00000541488 FAM32AQ9Y421 112 aaKnown RBP0.48□□□□□ -2.33
PRKDC-210ENST00000541488 LY96Q9Y6Y9 160 aa0.48□□□□□ -2.33
PRKDC-210ENST00000541488 IGHV1-58A0A0C4DH39 117 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 TAX1BP3O14907 124 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 CCL25O15444 150 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 NUPR1O60356 82 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 TNFP01375 233 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 EFNA4P52798 201 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 DEFA3P59666 94 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 UBE2BP63146 152 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 PSG9Q00887 426 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 DEFB112Q30KQ8 113 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 LINC00322Q6ZN03 302 aaPredicted RBP0.47□□□□□ -2.33
PRKDC-210ENST00000541488 Q8IYB0 196 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 PLPP5Q8NEB5 264 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 WFDC9Q8NEX5 89 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 OR10K1Q8NGX5 313 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 CHMP6Q96FZ7 201 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 TEX37Q96LM6 180 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 SLC25A21Q9BQT8 299 aaPredicted RBP0.47□□□□□ -2.33
PRKDC-210ENST00000541488 ARMC1Q9NVT9 282 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 OPTCQ9UBM4 332 aa0.47□□□□□ -2.33
PRKDC-210ENST00000541488 HEATR1Q9H583 2144 aaKnown RBP0.47□□□□□ -2.33
PRKDC-210ENST00000541488 IGLV3-32A0A0A0MS00 114 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 A0A0G2JMM0 328 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 CXorf51AA0A1B0GTR3 108 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms