RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 PRR9Q5T870 116 aa8.55□□□□□ -1.04
LGR5-203ENST00000540815 SMIM20Q8N5G0 67 aa8.55□□□□□ -1.04
LGR5-203ENST00000540815 IGHV4-4A0A075B6R2 117 aa8.54□□□□□ -1.04
LGR5-203ENST00000540815 Q6ZQT7 251 aa8.54□□□□□ -1.04
LGR5-203ENST00000540815 CARD19Q96LW7 228 aa8.54□□□□□ -1.04
LGR5-203ENST00000540815 MAP1LC3AQ9H492 121 aa8.54□□□□□ -1.04
LGR5-203ENST00000540815 TSPAN13O95857 204 aa8.54□□□□□ -1.04
LGR5-203ENST00000540815 HLA-DRB4P13762 266 aa8.54□□□□□ -1.04
LGR5-203ENST00000540815 ZFAND2AQ8N6M9 145 aa8.54□□□□□ -1.04
LGR5-203ENST00000540815 DPF1Q92782 380 aa8.54□□□□□ -1.04
LGR5-203ENST00000540815 FAM19A4Q96LR4 140 aa8.54□□□□□ -1.04
LGR5-203ENST00000540815 HLA-DRB4X5D2U9 266 aa8.54□□□□□ -1.04
LGR5-203ENST00000540815 RPL11P62913 178 aaKnown RBP8.53□□□□□ -1.04
LGR5-203ENST00000540815 LINC01549A6NIU2 74 aa8.53□□□□□ -1.04
LGR5-203ENST00000540815 FSHBP01225 129 aa8.53□□□□□ -1.04
LGR5-203ENST00000540815 RRN3P1Q2M238 152 aa8.53□□□□□ -1.04
LGR5-203ENST00000540815 MORN3Q6PF18 240 aaPredicted RBP8.53□□□□□ -1.04
LGR5-203ENST00000540815 CR1P17927 2039 aa8.53□□□□□ -1.04
LGR5-203ENST00000540815 EPG5Q9HCE0 2579 aa8.53□□□□□ -1.04
LGR5-203ENST00000540815 TRAV21A0A0B4J279 112 aa8.53□□□□□ -1.04
LGR5-203ENST00000540815 TNFRSF6BO95407 300 aa8.53□□□□□ -1.04
LGR5-203ENST00000540815 C1QTNF4Q9BXJ3 329 aa8.53□□□□□ -1.04
LGR5-203ENST00000540815 ERG28Q9UKR5 140 aa8.53□□□□□ -1.04
LGR5-203ENST00000540815 TRBV7-9A0A0J9YWB2 115 aa8.52□□□□□ -1.05
LGR5-203ENST00000540815 RNF223E7ERA6 249 aa8.52□□□□□ -1.05
LGR5-203ENST00000540815 IGHV4-31P0DP07 118 aa8.52□□□□□ -1.05
LGR5-203ENST00000540815 EDN2P20800 178 aa8.52□□□□□ -1.05
LGR5-203ENST00000540815 DEFB1P60022 68 aa8.52□□□□□ -1.05
LGR5-203ENST00000540815 C10orf99Q6UWK7 81 aa8.52□□□□□ -1.05
LGR5-203ENST00000540815 APRG1Q8IVJ8 170 aa8.52□□□□□ -1.05
LGR5-203ENST00000540815 CCDC179H3BU77 68 aa8.52□□□□□ -1.05
LGR5-203ENST00000540815 NXT2Q9NPJ8 142 aaKnown RBP8.52□□□□□ -1.05
LGR5-203ENST00000540815 BEX4Q9NWD9 120 aaPredicted RBP8.52□□□□□ -1.05
LGR5-203ENST00000540815 ABCA12Q86UK0 2595 aa8.51□□□□□ -1.05
LGR5-203ENST00000540815 VPREB3Q9UKI3 123 aa8.51□□□□□ -1.05
LGR5-203ENST00000540815 EMP1P54849 157 aa8.51□□□□□ -1.05
LGR5-203ENST00000540815 SPANXN1Q5VSR9 72 aa8.51□□□□□ -1.05
LGR5-203ENST00000540815 Q6YL49 198 aa8.51□□□□□ -1.05
LGR5-203ENST00000540815 J3KRW8 73 aa8.5□□□□□ -1.05
LGR5-203ENST00000540815 CRLF1O75462 422 aa8.5□□□□□ -1.05
LGR5-203ENST00000540815 CFAP126Q5VTH2 177 aa8.5□□□□□ -1.05
LGR5-203ENST00000540815 KLHL30-AS1Q8NEE0 82 aa8.5□□□□□ -1.05
LGR5-203ENST00000540815 MXRA5Q9NR99 2828 aa8.5□□□□□ -1.05
LGR5-203ENST00000540815 IGKV3-7A0A075B6H7 116 aa8.5□□□□□ -1.05
LGR5-203ENST00000540815 F6UB75 175 aa8.5□□□□□ -1.05
LGR5-203ENST00000540815 HOXA3O43365 443 aaPredicted RBP8.5□□□□□ -1.05
LGR5-203ENST00000540815 DPM2O94777 84 aa8.5□□□□□ -1.05
LGR5-203ENST00000540815 NHLRC4P0CG21 123 aaPredicted RBP8.5□□□□□ -1.05
LGR5-203ENST00000540815 ID1P41134 155 aa8.5□□□□□ -1.05
LGR5-203ENST00000540815 DEFB113Q30KQ7 82 aa8.5□□□□□ -1.05
LGR5-203ENST00000540815 LRRC75A-AS1Q8N1F1 130 aa8.5□□□□□ -1.05
LGR5-203ENST00000540815 MED14OSP0DP75 135 aa8.49□□□□□ -1.05
LGR5-203ENST00000540815 Q8N8P6 123 aa8.49□□□□□ -1.05
LGR5-203ENST00000540815 DCANP1Q8TF63 244 aa8.49□□□□□ -1.05
LGR5-203ENST00000540815 RNASE4P34096 147 aaKnown RBP8.49□□□□□ -1.05
LGR5-203ENST00000540815 ASIPP42127 132 aa8.49□□□□□ -1.05
LGR5-203ENST00000540815 NRACQ8N912 160 aa8.49□□□□□ -1.05
LGR5-203ENST00000540815 PLEKHB2Q96CS7 222 aa8.49□□□□□ -1.05
LGR5-203ENST00000540815 HIGD1BQ9P298 99 aa8.49□□□□□ -1.05
LGR5-203ENST00000540815 IGLV2-18A0A075B6J9 118 aa8.48□□□□□ -1.05
LGR5-203ENST00000540815 SRD5A1P18405 259 aa8.48□□□□□ -1.05
LGR5-203ENST00000540815 ZNF702PQ9H963 129 aa8.48□□□□□ -1.05
LGR5-203ENST00000540815 DOPEY2Q9Y3R5 2298 aa8.48□□□□□ -1.05
LGR5-203ENST00000540815 H7C2G1 150 aa8.48□□□□□ -1.05
LGR5-203ENST00000540815 ELANEP08246 267 aa8.48□□□□□ -1.05
LGR5-203ENST00000540815 MYOZ3Q8TDC0 251 aa8.48□□□□□ -1.05
LGR5-203ENST00000540815 ZMAT4Q9H898 229 aa8.48□□□□□ -1.05
LGR5-203ENST00000540815 NAV2Q8IVL1 2488 aa8.48□□□□□ -1.05
LGR5-203ENST00000540815 GAGE5Q13069 117 aa8.48□□□□□ -1.05
LGR5-203ENST00000540815 GAGE6Q13070 117 aa8.48□□□□□ -1.05
LGR5-203ENST00000540815 TRAV4A0A0B4J268 109 aa8.47□□□□□ -1.05
LGR5-203ENST00000540815 KLLNB2CW77 178 aa8.47□□□□□ -1.05
LGR5-203ENST00000540815 LGALS1P09382 135 aaKnown RBP8.47□□□□□ -1.05
LGR5-203ENST00000540815 S100A4P26447 101 aaKnown RBP8.47□□□□□ -1.05
LGR5-203ENST00000540815 TRBV7-3A0A075B6L6 115 aa8.47□□□□□ -1.05
LGR5-203ENST00000540815 TEX15Q9BXT5 2789 aa8.46□□□□□ -1.05
LGR5-203ENST00000540815 LGALS9O00182 355 aa8.46□□□□□ -1.05
LGR5-203ENST00000540815 TCL1BO95988 128 aa8.46□□□□□ -1.05
LGR5-203ENST00000540815 SRSF9Q13242 221 aaKnown RBP eCLIP8.46□□□□□ -1.05
LGR5-203ENST00000540815 PRRC2AP48634 2157 aaKnown RBP8.46□□□□□ -1.05
LGR5-203ENST00000540815 TEX29Q8N6K0 151 aa8.46□□□□□ -1.06
LGR5-203ENST00000540815 RNF152Q8N8N0 203 aa8.46□□□□□ -1.06
LGR5-203ENST00000540815 PHLDA3Q9Y5J5 127 aa8.46□□□□□ -1.06
LGR5-203ENST00000540815 APCP25054 2843 aa8.46□□□□□ -1.06
LGR5-203ENST00000540815 OR11H12B2RN74 326 aa8.45□□□□□ -1.06
LGR5-203ENST00000540815 M0R381 172 aa8.45□□□□□ -1.06
LGR5-203ENST00000540815 SCGB1D4Q6XE38 83 aa8.45□□□□□ -1.06
LGR5-203ENST00000540815 KRTAP1-3Q8IUG1 177 aa8.45□□□□□ -1.06
LGR5-203ENST00000540815 OR11H1Q8NG94 326 aa8.45□□□□□ -1.06
LGR5-203ENST00000540815 OR11H2Q8NH07 326 aa8.45□□□□□ -1.06
LGR5-203ENST00000540815 RAX2Q96IS3 184 aa8.45□□□□□ -1.06
LGR5-203ENST00000540815 UBE2E2Q96LR5 201 aa8.45□□□□□ -1.06
LGR5-203ENST00000540815 DPH3P1Q9H4G8 78 aa8.45□□□□□ -1.06
LGR5-203ENST00000540815 GNRH2O43555 120 aa8.45□□□□□ -1.06
LGR5-203ENST00000540815 RNASE3P12724 160 aaKnown RBP8.45□□□□□ -1.06
LGR5-203ENST00000540815 ZFAND6Q6FIF0 208 aa8.45□□□□□ -1.06
LGR5-203ENST00000540815 TRPT1Q86TN4 253 aaKnown RBP8.45□□□□□ -1.06
LGR5-203ENST00000540815 ANKRD29Q8N6D5 301 aa8.45□□□□□ -1.06
LGR5-203ENST00000540815 DLX4Q92988 240 aaPredicted RBP8.45□□□□□ -1.06
LGR5-203ENST00000540815 ODF3Q96PU9 254 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms