RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 VAMP3Q15836 100 aa15.51■□□□□ 0.07
LSM14A-202ENST00000540746 C2orf66Q6UXQ4 117 aa15.51■□□□□ 0.07
LSM14A-202ENST00000540746 TRAV12-1A0A0B4J245 112 aa15.5■□□□□ 0.07
LSM14A-202ENST00000540746 PPP1R17O96001 155 aa15.5■□□□□ 0.07
LSM14A-202ENST00000540746 HIST2H2BDQ6DRA6 164 aa15.5■□□□□ 0.07
LSM14A-202ENST00000540746 DEFB104AQ8WTQ1 72 aa15.5■□□□□ 0.07
LSM14A-202ENST00000540746 DUX3Q96PT4 197 aa15.5■□□□□ 0.07
LSM14A-202ENST00000540746 FOXI2Q6ZQN5 318 aa15.49■□□□□ 0.07
LSM14A-202ENST00000540746 NEXN-AS1Q8NBZ9 246 aa15.49■□□□□ 0.07
LSM14A-202ENST00000540746 CUBNO60494 3623 aa15.49■□□□□ 0.07
LSM14A-202ENST00000540746 IGHV1OR15-1A0A075B7D0 117 aa15.48■□□□□ 0.07
LSM14A-202ENST00000540746 TRAV8-6A0A0B4J262 113 aa15.48■□□□□ 0.07
LSM14A-202ENST00000540746 POLR2KP53803 58 aaKnown RBP15.48■□□□□ 0.07
LSM14A-202ENST00000540746 F8VRH5 84 aa15.48■□□□□ 0.07
LSM14A-202ENST00000540746 H7C1H1 209 aa15.48■□□□□ 0.07
LSM14A-202ENST00000540746 PLNP26678 52 aa15.48■□□□□ 0.07
LSM14A-202ENST00000540746 F5H697 171 aa15.47■□□□□ 0.07
LSM14A-202ENST00000540746 DUSP14O95147 198 aaKnown RBP15.47■□□□□ 0.07
LSM14A-202ENST00000540746 FAM74A4Q5TZK3 123 aa15.47■□□□□ 0.07
LSM14A-202ENST00000540746 OR11H1Q8NG94 326 aa15.47■□□□□ 0.07
LSM14A-202ENST00000540746 BAALCQ8WXS3 180 aa15.47■□□□□ 0.07
LSM14A-202ENST00000540746 KNCNA6PVL3 124 aa15.46■□□□□ 0.07
LSM14A-202ENST00000540746 RBMY1A1P0DJD3 496 aaKnown RBP15.46■□□□□ 0.07
LSM14A-202ENST00000540746 RBMY1CP0DJD4 496 aa15.46■□□□□ 0.07
LSM14A-202ENST00000540746 RPL32P62910 135 aaKnown RBP15.46■□□□□ 0.07
LSM14A-202ENST00000540746 RBMY1FQ15415 496 aaKnown RBP15.46■□□□□ 0.07
LSM14A-202ENST00000540746 AMMECR1LQ6DCA0 310 aa15.46■□□□□ 0.07
LSM14A-202ENST00000540746 MAPKAPK5-AS1Q8N8E1 139 aa15.46■□□□□ 0.07
LSM14A-202ENST00000540746 TRBV25-1A0A075B6N4 114 aa15.46■□□□□ 0.07
LSM14A-202ENST00000540746 HIGD1BQ9P298 99 aa15.46■□□□□ 0.07
LSM14A-202ENST00000540746 CHTOPQ9Y3Y2 248 aaKnown RBP15.46■□□□□ 0.07
LSM14A-202ENST00000540746 LINC01619G3V211 115 aa15.45■□□□□ 0.06
LSM14A-202ENST00000540746 CRYGDP07320 174 aa15.45■□□□□ 0.06
LSM14A-202ENST00000540746 WFDC11Q8NEX6 87 aa15.45■□□□□ 0.06
LSM14A-202ENST00000540746 K7EP13 123 aa15.44■□□□□ 0.06
LSM14A-202ENST00000540746 HLA-DRB4P13762 266 aa15.44■□□□□ 0.06
LSM14A-202ENST00000540746 CHAC1Q9BUX1 264 aa15.44■□□□□ 0.06
LSM14A-202ENST00000540746 HLA-DRB4X5D2U9 266 aa15.44■□□□□ 0.06
LSM14A-202ENST00000540746 A6NDN8 102 aa15.43■□□□□ 0.06
LSM14A-202ENST00000540746 DEFB131AP59861 70 aa15.43■□□□□ 0.06
LSM14A-202ENST00000540746 MORN3Q6PF18 240 aaPredicted RBP15.43■□□□□ 0.06
LSM14A-202ENST00000540746 ZFP2Q6ZN57 461 aa15.43■□□□□ 0.06
LSM14A-202ENST00000540746 C4orf3Q8WVX3 66 aa15.43■□□□□ 0.06
LSM14A-202ENST00000540746 SDHAF1A6NFY7 115 aa15.43■□□□□ 0.06
LSM14A-202ENST00000540746 TSHBP01222 138 aa15.43■□□□□ 0.06
LSM14A-202ENST00000540746 TMEM61Q8N0U2 210 aa15.43■□□□□ 0.06
LSM14A-202ENST00000540746 PRSS29PA6NIE9 313 aa15.42■□□□□ 0.06
LSM14A-202ENST00000540746 KHDC1LQ5JSQ8 128 aa15.42■□□□□ 0.06
LSM14A-202ENST00000540746 HIST2H2BCQ6DN03 193 aa15.42■□□□□ 0.06
LSM14A-202ENST00000540746 DLX4Q92988 240 aaPredicted RBP15.42■□□□□ 0.06
LSM14A-202ENST00000540746 SETD2Q9BYW2 2564 aaPredicted RBP15.42■□□□□ 0.06
LSM14A-202ENST00000540746 PDZD2O15018 2839 aa15.42■□□□□ 0.06
LSM14A-202ENST00000540746 H3BRM9 83 aa15.42■□□□□ 0.06
LSM14A-202ENST00000540746 M0QY20 66 aa15.42■□□□□ 0.06
LSM14A-202ENST00000540746 SYT8Q8NBV8 401 aa15.42■□□□□ 0.06
LSM14A-202ENST00000540746 OR4C5Q8NGB2 326 aa15.42■□□□□ 0.06
LSM14A-202ENST00000540746 RBMY1BA6NDE4 496 aaKnown RBP15.41■□□□□ 0.06
LSM14A-202ENST00000540746 RBMY1EA6NEQ0 496 aaKnown RBP15.41■□□□□ 0.06
LSM14A-202ENST00000540746 VCYO14598 125 aa15.41■□□□□ 0.06
LSM14A-202ENST00000540746 RBMY1DP0C7P1 496 aaKnown RBP15.41■□□□□ 0.06
LSM14A-202ENST00000540746 RPL39P62891 51 aaKnown RBP15.41■□□□□ 0.06
LSM14A-202ENST00000540746 CYSLTR1Q9Y271 337 aa15.41■□□□□ 0.06
LSM14A-202ENST00000540746 TP53TG1Q9Y2A0 90 aa15.41■□□□□ 0.06
LSM14A-202ENST00000540746 ACANP16112 2415 aa15.41■□□□□ 0.06
LSM14A-202ENST00000540746 TRBV6-5A0A0K0K1A5 114 aa15.41■□□□□ 0.06
LSM14A-202ENST00000540746 TRBV27A0A0K0K1C4 114 aa15.41■□□□□ 0.06
LSM14A-202ENST00000540746 IGIPA6NJ69 53 aa15.41■□□□□ 0.06
LSM14A-202ENST00000540746 FXYD2P54710 66 aa15.41■□□□□ 0.06
LSM14A-202ENST00000540746 ZNF56Q15929 161 aa15.41■□□□□ 0.06
LSM14A-202ENST00000540746 ZNF876PQ49A33 203 aa15.41■□□□□ 0.06
LSM14A-202ENST00000540746 WNK1Q9H4A3 2382 aa15.4■□□□□ 0.06
LSM14A-202ENST00000540746 ITPR2Q14571 2701 aa15.4■□□□□ 0.06
LSM14A-202ENST00000540746 H3BMM0 161 aa15.4■□□□□ 0.06
LSM14A-202ENST00000540746 Q6ZSV7 163 aa15.4■□□□□ 0.06
LSM14A-202ENST00000540746 KLHL30-AS1Q8NEE0 82 aa15.39■□□□□ 0.05
LSM14A-202ENST00000540746 JMJD8Q96S16 334 aa15.39■□□□□ 0.05
LSM14A-202ENST00000540746 NAA38Q9BRA0 125 aaKnown RBP15.39■□□□□ 0.05
LSM14A-202ENST00000540746 C9orf118A6NHY6 69 aa15.39■□□□□ 0.05
LSM14A-202ENST00000540746 A8MTW9 85 aa15.39■□□□□ 0.05
LSM14A-202ENST00000540746 PRM2P04554 102 aa15.39■□□□□ 0.05
LSM14A-202ENST00000540746 GCSHP23434 173 aa15.39■□□□□ 0.05
LSM14A-202ENST00000540746 KIR2DL4Q99706 377 aa15.39■□□□□ 0.05
LSM14A-202ENST00000540746 PEMTQ9UBM1 199 aa15.38■□□□□ 0.05
LSM14A-202ENST00000540746 NIPBLQ6KC79 2804 aaeCLIP15.38■□□□□ 0.05
LSM14A-202ENST00000540746 HTN1P15515 57 aa15.38■□□□□ 0.05
LSM14A-202ENST00000540746 RAB37Q96AX2 223 aa15.38■□□□□ 0.05
LSM14A-202ENST00000540746 ZNF256Q9Y2P7 627 aaPredicted RBP15.38■□□□□ 0.05
LSM14A-202ENST00000540746 TRGV11A0A075B6L2 103 aa15.37■□□□□ 0.05
LSM14A-202ENST00000540746 DNAJC9-AS1A6NH13 148 aa15.36■□□□□ 0.05
LSM14A-202ENST00000540746 H3BUT2 72 aa15.36■□□□□ 0.05
LSM14A-202ENST00000540746 TMEM86BQ8N661 226 aa15.36■□□□□ 0.05
LSM14A-202ENST00000540746 RIPPLY3P57055 190 aa15.36■□□□□ 0.05
LSM14A-202ENST00000540746 IGLV4-69A0A075B6H9 119 aa15.35■□□□□ 0.05
LSM14A-202ENST00000540746 TRAV2A0A0B4J234 112 aa15.35■□□□□ 0.05
LSM14A-202ENST00000540746 MAP6D1Q9H9H5 199 aa15.35■□□□□ 0.05
LSM14A-202ENST00000540746 MTORP42345 2549 aa15.35■□□□□ 0.05
LSM14A-202ENST00000540746 DEFB114Q30KQ6 69 aa15.35■□□□□ 0.05
LSM14A-202ENST00000540746 RNASE8Q8TDE3 154 aaKnown RBP15.35■□□□□ 0.05
LSM14A-202ENST00000540746 TM2D2Q9BX73 214 aa15.35■□□□□ 0.05
LSM14A-202ENST00000540746 ESM1Q9NQ30 184 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms