RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 C14orf178Q8N769 122 aaPredicted RBP4.97□□□□□ -1.61
KLHL42-203ENST00000540301 OR2G3Q8NGZ4 309 aa4.97□□□□□ -1.61
KLHL42-203ENST00000540301 PRSS3P2Q8NHM4 247 aa4.97□□□□□ -1.61
KLHL42-203ENST00000540301 DEDD2Q8WXF8 326 aa4.97□□□□□ -1.61
KLHL42-203ENST00000540301 ASB13Q8WXK3 278 aa4.97□□□□□ -1.61
KLHL42-203ENST00000540301 PARLQ9H300 379 aa4.97□□□□□ -1.61
KLHL42-203ENST00000540301 LENEPQ9Y5L5 61 aa4.97□□□□□ -1.61
KLHL42-203ENST00000540301 A0A087WWL8 130 aa4.96□□□□□ -1.62
KLHL42-203ENST00000540301 C9orf170A2RU37 121 aa4.96□□□□□ -1.62
KLHL42-203ENST00000540301 RGS5O15539 181 aa4.96□□□□□ -1.62
KLHL42-203ENST00000540301 AKAIN1P0CW23 69 aa4.96□□□□□ -1.62
KLHL42-203ENST00000540301 CSN1S1P47710 185 aa4.96□□□□□ -1.62
KLHL42-203ENST00000540301 AKR1D1P51857 326 aa4.96□□□□□ -1.62
KLHL42-203ENST00000540301 LSM3P62310 102 aaKnown RBP4.96□□□□□ -1.62
KLHL42-203ENST00000540301 ID3Q02535 119 aa4.96□□□□□ -1.62
KLHL42-203ENST00000540301 SSBP1Q04837 148 aaKnown RBP4.96□□□□□ -1.62
KLHL42-203ENST00000540301 OR10G7Q8NGN6 311 aa4.96□□□□□ -1.62
KLHL42-203ENST00000540301 C15orf40Q8WUR7 153 aa4.96□□□□□ -1.62
KLHL42-203ENST00000540301 PTH2Q96A98 100 aa4.96□□□□□ -1.62
KLHL42-203ENST00000540301 SMIM8Q96KF7 97 aa4.96□□□□□ -1.62
KLHL42-203ENST00000540301 A8MWV9 139 aa4.95□□□□□ -1.62
KLHL42-203ENST00000540301 SSSCA1O60232 199 aa4.95□□□□□ -1.62
KLHL42-203ENST00000540301 MBP02144 154 aa4.95□□□□□ -1.62
KLHL42-203ENST00000540301 ARL16Q0P5N6 197 aa4.95□□□□□ -1.62
KLHL42-203ENST00000540301 CLPSL2Q6UWE3 100 aa4.95□□□□□ -1.62
KLHL42-203ENST00000540301 NRARPQ7Z6K4 114 aa4.95□□□□□ -1.62
KLHL42-203ENST00000540301 DYNC2LI1Q8TCX1 351 aa4.95□□□□□ -1.62
KLHL42-203ENST00000540301 SFT2D1Q8WV19 159 aa4.95□□□□□ -1.62
KLHL42-203ENST00000540301 C9orf85Q96MD7 179 aa4.95□□□□□ -1.62
KLHL42-203ENST00000540301 GGACTQ9BVM4 153 aa4.95□□□□□ -1.62
KLHL42-203ENST00000540301 MRPL18Q9H0U6 180 aaKnown RBP4.95□□□□□ -1.62
KLHL42-203ENST00000540301 PRR34Q9NV39 138 aa4.95□□□□□ -1.62
KLHL42-203ENST00000540301 MCUBQ9NWR8 336 aa4.95□□□□□ -1.62
KLHL42-203ENST00000540301 SCP2D1Q9UJQ7 156 aa4.95□□□□□ -1.62
KLHL42-203ENST00000540301 IGLV10-54A0A075B6I4 117 aa4.94□□□□□ -1.62
KLHL42-203ENST00000540301 TCAPO15273 167 aa4.94□□□□□ -1.62
KLHL42-203ENST00000540301 NBEAP1P0C6P0 100 aa4.94□□□□□ -1.62
KLHL42-203ENST00000540301 LINC00614P0C842 121 aa4.94□□□□□ -1.62
KLHL42-203ENST00000540301 NEDD8Q15843 81 aa4.94□□□□□ -1.62
KLHL42-203ENST00000540301 TEX261Q6UWH6 196 aa4.94□□□□□ -1.62
KLHL42-203ENST00000540301 COMMD7Q86VX2 200 aa4.94□□□□□ -1.62
KLHL42-203ENST00000540301 LINC00269Q8N2A0 174 aa4.94□□□□□ -1.62
KLHL42-203ENST00000540301 INO80EQ8NBZ0 244 aaPredicted RBP4.94□□□□□ -1.62
KLHL42-203ENST00000540301 HYLS1Q96M11 299 aa4.94□□□□□ -1.62
KLHL42-203ENST00000540301 CCDC32Q9BV29 185 aa4.94□□□□□ -1.62
KLHL42-203ENST00000540301 IGLV1-50A0A075B6I6 118 aa4.93□□□□□ -1.62
KLHL42-203ENST00000540301 A0A096LNI7 61 aa4.93□□□□□ -1.62
KLHL42-203ENST00000540301 TRBV6-8A0A0A6YYG3 113 aa4.93□□□□□ -1.62
KLHL42-203ENST00000540301 A0A1B0GV90 55 aa4.93□□□□□ -1.62
KLHL42-203ENST00000540301 F6UZH7 168 aa4.93□□□□□ -1.62
KLHL42-203ENST00000540301 EIF3GO75821 320 aaKnown RBP eCLIP4.93□□□□□ -1.62
KLHL42-203ENST00000540301 RPS10P46783 165 aaKnown RBP4.93□□□□□ -1.62
KLHL42-203ENST00000540301 CTF1Q16619 201 aa4.93□□□□□ -1.62
KLHL42-203ENST00000540301 LGALSLQ3ZCW2 172 aaPredicted RBP4.93□□□□□ -1.62
KLHL42-203ENST00000540301 UFSP1Q6NVU6 142 aa4.93□□□□□ -1.62
KLHL42-203ENST00000540301 TMED6Q8WW62 240 aa4.93□□□□□ -1.62
KLHL42-203ENST00000540301 SLC25A2Q9BXI2 301 aa4.93□□□□□ -1.62
KLHL42-203ENST00000540301 NAA50Q9GZZ1 169 aaKnown RBP4.93□□□□□ -1.62
KLHL42-203ENST00000540301 MIXL1Q9H2W2 232 aa4.93□□□□□ -1.62
KLHL42-203ENST00000540301 MUC17Q685J3 4493 aa4.93□□□□□ -1.62
KLHL42-203ENST00000540301 FAM24AA6NFZ4 105 aa4.92□□□□□ -1.62
KLHL42-203ENST00000540301 RPL29P47914 159 aaKnown RBP4.92□□□□□ -1.62
KLHL42-203ENST00000540301 PKIAP61925 76 aa4.92□□□□□ -1.62
KLHL42-203ENST00000540301 TMEM128Q5BJH2 165 aa4.92□□□□□ -1.62
KLHL42-203ENST00000540301 PHYHIPLQ96FC7 376 aa4.92□□□□□ -1.62
KLHL42-203ENST00000540301 CHCHD5Q9BSY4 110 aa4.92□□□□□ -1.62
KLHL42-203ENST00000540301 JPT2Q9H910 190 aa4.92□□□□□ -1.62
KLHL42-203ENST00000540301 NIT2Q9NQR4 276 aa4.92□□□□□ -1.62
KLHL42-203ENST00000540301 LINC00474Q9P2X8 69 aa4.92□□□□□ -1.62
KLHL42-203ENST00000540301 TRAV1-1A0A0B4J248 108 aa4.91□□□□□ -1.62
KLHL42-203ENST00000540301 SCGB1D2O95969 90 aa4.91□□□□□ -1.62
KLHL42-203ENST00000540301 GHRHP01286 108 aa4.91□□□□□ -1.62
KLHL42-203ENST00000540301 RNASE3P12724 160 aaKnown RBP4.91□□□□□ -1.62
KLHL42-203ENST00000540301 UBE2D3P61077 147 aa4.91□□□□□ -1.62
KLHL42-203ENST00000540301 RANP62826 216 aaKnown RBP4.91□□□□□ -1.62
KLHL42-203ENST00000540301 UBE2D2P62837 147 aa4.91□□□□□ -1.62
KLHL42-203ENST00000540301 MRPS10P82664 201 aaKnown RBP4.91□□□□□ -1.62
KLHL42-203ENST00000540301 RPL36AP83881 106 aaKnown RBP4.91□□□□□ -1.62
KLHL42-203ENST00000540301 PIK3CD-AS1Q5SR53 167 aa4.91□□□□□ -1.62
KLHL42-203ENST00000540301 C9orf62Q8N4C0 152 aa4.91□□□□□ -1.62
KLHL42-203ENST00000540301 FER1L6-AS1Q8NA97 138 aa4.91□□□□□ -1.62
KLHL42-203ENST00000540301 RPL36ALQ969Q0 106 aaKnown RBP4.91□□□□□ -1.62
KLHL42-203ENST00000540301 FXYD5Q96DB9 178 aa4.91□□□□□ -1.62
KLHL42-203ENST00000540301 TVP23CQ96ET8 276 aa4.91□□□□□ -1.62
KLHL42-203ENST00000540301 FAM167A-AS1Q96KT0 104 aa4.91□□□□□ -1.62
KLHL42-203ENST00000540301 SLIRPQ9GZT3 109 aaKnown RBP4.91□□□□□ -1.62
KLHL42-203ENST00000540301 TREM1Q9NP99 234 aa4.91□□□□□ -1.62
KLHL42-203ENST00000540301 TRBV7-3A0A075B6L6 115 aa4.9□□□□□ -1.63
KLHL42-203ENST00000540301 RHODO00212 210 aa4.9□□□□□ -1.63
KLHL42-203ENST00000540301 SFT2D2O95562 160 aa4.9□□□□□ -1.63
KLHL42-203ENST00000540301 TSPAN13O95857 204 aa4.9□□□□□ -1.63
KLHL42-203ENST00000540301 GZMBP10144 247 aa4.9□□□□□ -1.63
KLHL42-203ENST00000540301 RAB5CP51148 216 aa4.9□□□□□ -1.63
KLHL42-203ENST00000540301 TAS2R30P59541 319 aa4.9□□□□□ -1.63
KLHL42-203ENST00000540301 S100A10P60903 97 aa4.9□□□□□ -1.63
KLHL42-203ENST00000540301 RBX1P62877 108 aa4.9□□□□□ -1.63
KLHL42-203ENST00000540301 REG3AQ06141 175 aa4.9□□□□□ -1.63
KLHL42-203ENST00000540301 MIR17HGQ75NE6 70 aa4.9□□□□□ -1.63
KLHL42-203ENST00000540301 SMIM4Q8WVI0 70 aa4.9□□□□□ -1.63
KLHL42-203ENST00000540301 DIRC1Q969H9 104 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms