RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 AKAP6Q13023 2319 aa14.04□□□□□ -0.16
SFSWAP-207ENST00000538548 TRPT1Q86TN4 253 aaKnown RBP14.04□□□□□ -0.16
SFSWAP-207ENST00000538548 RAX2Q96IS3 184 aa14.04□□□□□ -0.16
SFSWAP-207ENST00000538548 CFAP46Q8IYW2 2715 aa14.04□□□□□ -0.16
SFSWAP-207ENST00000538548 K7ENP7 123 aa14.03□□□□□ -0.16
SFSWAP-207ENST00000538548 P0DMU3 169 aa14.03□□□□□ -0.16
SFSWAP-207ENST00000538548 FAM231AP0DMU4 169 aa14.03□□□□□ -0.16
SFSWAP-207ENST00000538548 FAM231CP0DMU5 169 aa14.03□□□□□ -0.16
SFSWAP-207ENST00000538548 ANXA2RQ3ZCQ2 193 aa14.03□□□□□ -0.16
SFSWAP-207ENST00000538548 IGHV4OR15-8A0A075B7B6 117 aa14.03□□□□□ -0.16
SFSWAP-207ENST00000538548 A0A087WW49 117 aa14.03□□□□□ -0.16
SFSWAP-207ENST00000538548 A4D1N5 150 aa14.03□□□□□ -0.16
SFSWAP-207ENST00000538548 MINOS1Q5TGZ0 78 aa14.03□□□□□ -0.16
SFSWAP-207ENST00000538548 EEF1AKMT3Q96AZ1 226 aa14.03□□□□□ -0.16
SFSWAP-207ENST00000538548 C20orf173Q96LM9 149 aa14.03□□□□□ -0.16
SFSWAP-207ENST00000538548 MINOS1-NBL1R4GNA1 71 aa14.03□□□□□ -0.16
SFSWAP-207ENST00000538548 TRAV4A0A0B4J268 109 aa14.02□□□□□ -0.16
SFSWAP-207ENST00000538548 LGALS3P17931 250 aaKnown RBP14.02□□□□□ -0.16
SFSWAP-207ENST00000538548 ZNRF2Q8NHG8 242 aa14.02□□□□□ -0.16
SFSWAP-207ENST00000538548 A0A0B4J2C4 111 aa14.02□□□□□ -0.17
SFSWAP-207ENST00000538548 GAGE12JA6NER3 117 aa14.02□□□□□ -0.17
SFSWAP-207ENST00000538548 ATP6V0E1O15342 81 aa14.02□□□□□ -0.17
SFSWAP-207ENST00000538548 GAGE7O76087 117 aa14.02□□□□□ -0.17
SFSWAP-207ENST00000538548 GAGE12FP0CL80 117 aa14.02□□□□□ -0.17
SFSWAP-207ENST00000538548 GAGE12GP0CL81 117 aa14.02□□□□□ -0.17
SFSWAP-207ENST00000538548 GAGE12IP0CL82 117 aa14.02□□□□□ -0.17
SFSWAP-207ENST00000538548 GAGE4Q13068 117 aa14.02□□□□□ -0.17
SFSWAP-207ENST00000538548 ZNF876PQ49A33 203 aa14.02□□□□□ -0.17
SFSWAP-207ENST00000538548 Q6Q795 121 aa14.02□□□□□ -0.17
SFSWAP-207ENST00000538548 TMEM263Q8WUH6 116 aaKnown RBP14.02□□□□□ -0.17
SFSWAP-207ENST00000538548 CACNA1AO00555 2505 aa14.01□□□□□ -0.17
SFSWAP-207ENST00000538548 TRBV7-1A0A0A6YYK4 115 aa14.01□□□□□ -0.17
SFSWAP-207ENST00000538548 ARL3P36405 182 aa14.01□□□□□ -0.17
SFSWAP-207ENST00000538548 POLR2KP53803 58 aaKnown RBP14.01□□□□□ -0.17
SFSWAP-207ENST00000538548 Q8N1Y9 231 aa14.01□□□□□ -0.17
SFSWAP-207ENST00000538548 OR10J6PQ8NGY7 276 aa14.01□□□□□ -0.17
SFSWAP-207ENST00000538548 EIF4EBP3O60516 100 aaPredicted RBP14□□□□□ -0.17
SFSWAP-207ENST00000538548 IFITM1P13164 125 aa14□□□□□ -0.17
SFSWAP-207ENST00000538548 RPL39P62891 51 aaKnown RBP14□□□□□ -0.17
SFSWAP-207ENST00000538548 TTC32Q5I0X7 151 aa14□□□□□ -0.17
SFSWAP-207ENST00000538548 NTN5Q8WTR8 489 aaPredicted RBP14□□□□□ -0.17
SFSWAP-207ENST00000538548 LINC01600Q96MT4 127 aa14□□□□□ -0.17
SFSWAP-207ENST00000538548 ANKHD1Q8IWZ3 2542 aaKnown RBP14□□□□□ -0.17
SFSWAP-207ENST00000538548 RNASE3P12724 160 aaKnown RBP14□□□□□ -0.17
SFSWAP-207ENST00000538548 C1orf122Q6ZSJ8 110 aa14□□□□□ -0.17
SFSWAP-207ENST00000538548 CRLF1O75462 422 aa13.99□□□□□ -0.17
SFSWAP-207ENST00000538548 NXPH4O95158 308 aa13.99□□□□□ -0.17
SFSWAP-207ENST00000538548 LINC00315P59091 139 aa13.99□□□□□ -0.17
SFSWAP-207ENST00000538548 ATXN8Q156A1 80 aa13.99□□□□□ -0.17
SFSWAP-207ENST00000538548 KIF25-AS1Q9Y6Z4 181 aa13.99□□□□□ -0.17
SFSWAP-207ENST00000538548 VCYO14598 125 aa13.99□□□□□ -0.17
SFSWAP-207ENST00000538548 OVOL1O14753 267 aa13.99□□□□□ -0.17
SFSWAP-207ENST00000538548 CACNA1BQ00975 2339 aa13.99□□□□□ -0.17
SFSWAP-207ENST00000538548 LY6HO94772 140 aa13.98□□□□□ -0.17
SFSWAP-207ENST00000538548 RPL13AP40429 203 aaKnown RBP13.98□□□□□ -0.17
SFSWAP-207ENST00000538548 GNRH2O43555 120 aa13.98□□□□□ -0.17
SFSWAP-207ENST00000538548 LINC01620Q4KN68 170 aa13.98□□□□□ -0.17
SFSWAP-207ENST00000538548 G3V318 75 aa13.97□□□□□ -0.17
SFSWAP-207ENST00000538548 RNASE4P34096 147 aaKnown RBP13.97□□□□□ -0.17
SFSWAP-207ENST00000538548 HIVEP3Q5T1R4 2406 aa13.97□□□□□ -0.17
SFSWAP-207ENST00000538548 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.96□□□□□ -0.17
SFSWAP-207ENST00000538548 CCDC179H3BU77 68 aa13.96□□□□□ -0.17
SFSWAP-207ENST00000538548 H7C2G1 150 aa13.96□□□□□ -0.17
SFSWAP-207ENST00000538548 LEPROTO15243 131 aa13.96□□□□□ -0.17
SFSWAP-207ENST00000538548 FAM19A4Q96LR4 140 aa13.96□□□□□ -0.17
SFSWAP-207ENST00000538548 HRNRQ86YZ3 2850 aaPredicted RBP13.96□□□□□ -0.17
SFSWAP-207ENST00000538548 APRG1Q8IVJ8 170 aa13.96□□□□□ -0.17
SFSWAP-207ENST00000538548 TRAV2A0A0B4J234 112 aa13.95□□□□□ -0.18
SFSWAP-207ENST00000538548 TRAV8-4A0A0B4J246 113 aa13.95□□□□□ -0.18
SFSWAP-207ENST00000538548 ODF3Q96PU9 254 aa13.95□□□□□ -0.18
SFSWAP-207ENST00000538548 MUC4Q99102 2169 aa13.95□□□□□ -0.18
SFSWAP-207ENST00000538548 FLNCQ14315 2725 aa13.95□□□□□ -0.18
SFSWAP-207ENST00000538548 Q1RN00 199 aa13.95□□□□□ -0.18
SFSWAP-207ENST00000538548 SUMO4Q6EEV6 95 aa13.95□□□□□ -0.18
SFSWAP-207ENST00000538548 MUSTN1Q8IVN3 82 aa13.95□□□□□ -0.18
SFSWAP-207ENST00000538548 ELANEP08246 267 aa13.94□□□□□ -0.18
SFSWAP-207ENST00000538548 DEFB104AQ8WTQ1 72 aa13.94□□□□□ -0.18
SFSWAP-207ENST00000538548 UTP20O75691 2785 aaKnown RBP13.94□□□□□ -0.18
SFSWAP-207ENST00000538548 TRBV10-2A0A0K0K1G8 114 aa13.94□□□□□ -0.18
SFSWAP-207ENST00000538548 TEX49A0A1B0GTD5 131 aa13.94□□□□□ -0.18
SFSWAP-207ENST00000538548 TMEM223A0PJW6 202 aa13.94□□□□□ -0.18
SFSWAP-207ENST00000538548 SDHAF1A6NFY7 115 aa13.94□□□□□ -0.18
SFSWAP-207ENST00000538548 IGSF10Q6WRI0 2623 aa13.94□□□□□ -0.18
SFSWAP-207ENST00000538548 TRBV7-9A0A0J9YWB2 115 aa13.94□□□□□ -0.18
SFSWAP-207ENST00000538548 TRBV27A0A0K0K1C4 114 aa13.94□□□□□ -0.18
SFSWAP-207ENST00000538548 SOCS3O14543 225 aa13.94□□□□□ -0.18
SFSWAP-207ENST00000538548 LINC01560Q8TB33 94 aa13.94□□□□□ -0.18
SFSWAP-207ENST00000538548 SPANXA1Q9NS26 97 aa13.94□□□□□ -0.18
SFSWAP-207ENST00000538548 TRBV30A0A0K0K1B3 111 aa13.93□□□□□ -0.18
SFSWAP-207ENST00000538548 IGHV1-69P01742 117 aa13.93□□□□□ -0.18
SFSWAP-207ENST00000538548 DEFB1P60022 68 aa13.93□□□□□ -0.18
SFSWAP-207ENST00000538548 LY6DQ14210 128 aa13.93□□□□□ -0.18
SFSWAP-207ENST00000538548 C15orf53Q8NAA6 179 aa13.93□□□□□ -0.18
SFSWAP-207ENST00000538548 FAM110AQ9BQ89 295 aa13.93□□□□□ -0.18
SFSWAP-207ENST00000538548 IGHV4-39P01824 125 aa13.92□□□□□ -0.18
SFSWAP-207ENST00000538548 A0A0J9YX75 114 aa13.92□□□□□ -0.18
SFSWAP-207ENST00000538548 H3BMM0 161 aa13.92□□□□□ -0.18
SFSWAP-207ENST00000538548 UBE2WQ96B02 151 aa13.92□□□□□ -0.18
SFSWAP-207ENST00000538548 VPS13CQ709C8 3753 aa13.91□□□□□ -0.18
SFSWAP-207ENST00000538548 CRYBG3Q68DQ2 2970 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms