RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 HHLA3Q9XRX5 114 aa9.81□□□□□ -0.84
SPG11-203ENST00000535302 IGHV7-81A0A0B4J1V7 117 aa9.8□□□□□ -0.84
SPG11-203ENST00000535302 PSMB8P28062 276 aa9.8□□□□□ -0.84
SPG11-203ENST00000535302 SEC61GP60059 68 aa9.8□□□□□ -0.84
SPG11-203ENST00000535302 ANKRD39Q53RE8 183 aa9.8□□□□□ -0.84
SPG11-203ENST00000535302 C9orf66Q5T8R8 295 aa9.8□□□□□ -0.84
SPG11-203ENST00000535302 BRK1Q8WUW1 75 aa9.8□□□□□ -0.84
SPG11-203ENST00000535302 HRCT1Q6UXD1 115 aa9.8□□□□□ -0.84
SPG11-203ENST00000535302 PRR20EP86478 221 aa9.8□□□□□ -0.84
SPG11-203ENST00000535302 PRR20CP86479 221 aa9.8□□□□□ -0.84
SPG11-203ENST00000535302 PRR20DP86480 221 aa9.8□□□□□ -0.84
SPG11-203ENST00000535302 PRR20BP86481 221 aa9.8□□□□□ -0.84
SPG11-203ENST00000535302 PRR20AP86496 221 aa9.8□□□□□ -0.84
SPG11-203ENST00000535302 TTTY13Q9BZ97 58 aa9.8□□□□□ -0.84
SPG11-203ENST00000535302 LYPD6BQ8NI32 183 aa9.8□□□□□ -0.84
SPG11-203ENST00000535302 TRAV26-1A0A087WT03 109 aa9.79□□□□□ -0.84
SPG11-203ENST00000535302 SCXQ7RTU7 201 aa9.79□□□□□ -0.84
SPG11-203ENST00000535302 IGLV3-1P01715 115 aa9.79□□□□□ -0.84
SPG11-203ENST00000535302 KAAG1Q9UBP8 84 aa9.79□□□□□ -0.84
SPG11-203ENST00000535302 NCOR1P1Q9H4R4 102 aa9.79□□□□□ -0.84
SPG11-203ENST00000535302 FAM236AA0A1B0GUQ0 79 aa9.79□□□□□ -0.84
SPG11-203ENST00000535302 FAM236BA0A1B0GV22 79 aa9.79□□□□□ -0.84
SPG11-203ENST00000535302 SPART-AS1P0CW21 52 aa9.79□□□□□ -0.84
SPG11-203ENST00000535302 MRPL36Q9P0J6 103 aaKnown RBP9.78□□□□□ -0.84
SPG11-203ENST00000535302 MED12LQ86YW9 2145 aa9.78□□□□□ -0.84
SPG11-203ENST00000535302 A0A0J9YXV3 536 aa9.78□□□□□ -0.84
SPG11-203ENST00000535302 PRAC2D3DTV9 90 aa9.78□□□□□ -0.84
SPG11-203ENST00000535302 SMIM20Q8N5G0 67 aa9.78□□□□□ -0.84
SPG11-203ENST00000535302 NCOA6Q14686 2063 aaPredicted RBP9.78□□□□□ -0.84
SPG11-203ENST00000535302 A0A1W2PNU3 283 aaPredicted RBP9.78□□□□□ -0.84
SPG11-203ENST00000535302 SRSF2Q01130 221 aaKnown RBP9.77□□□□□ -0.84
SPG11-203ENST00000535302 CEMP1Q6PRD7 247 aaPredicted RBP9.77□□□□□ -0.84
SPG11-203ENST00000535302 OPRPNQ99935 248 aaPredicted RBP9.77□□□□□ -0.84
SPG11-203ENST00000535302 P0DMU3 169 aa9.77□□□□□ -0.85
SPG11-203ENST00000535302 FAM231AP0DMU4 169 aa9.77□□□□□ -0.85
SPG11-203ENST00000535302 FAM231CP0DMU5 169 aa9.77□□□□□ -0.85
SPG11-203ENST00000535302 TEX22C9J3V5 150 aa9.77□□□□□ -0.85
SPG11-203ENST00000535302 ATP5G1P05496 136 aa9.77□□□□□ -0.85
SPG11-203ENST00000535302 MP68P56378 58 aa9.77□□□□□ -0.85
SPG11-203ENST00000535302 A4D1N5 150 aa9.76□□□□□ -0.85
SPG11-203ENST00000535302 PLA2G5P39877 138 aa9.76□□□□□ -0.85
SPG11-203ENST00000535302 SIRPDQ9H106 197 aa9.76□□□□□ -0.85
SPG11-203ENST00000535302 I3L2K1 104 aa9.76□□□□□ -0.85
SPG11-203ENST00000535302 GPHB5Q86YW7 130 aa9.76□□□□□ -0.85
SPG11-203ENST00000535302 FAM110AQ9BQ89 295 aa9.76□□□□□ -0.85
SPG11-203ENST00000535302 C2orf16Q68DN1 1984 aa9.76□□□□□ -0.85
SPG11-203ENST00000535302 TANC1Q9C0D5 1861 aa9.76□□□□□ -0.85
SPG11-203ENST00000535302 LECT2O14960 151 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 IGHV4-30-4P0DP06 118 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 IGHV4-31P0DP07 118 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 Q8N1Y9 231 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 C16orf74Q96GX8 76 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 KIAA1549Q9HCM3 1950 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 OBSL1O75147 1896 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 GPR179Q6PRD1 2367 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.75□□□□□ -0.85
SPG11-203ENST00000535302 K7EIM0 57 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 CASC2Q6XLA1 102 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 C20orf144Q9BQM9 153 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 PYGO2Q9BRQ0 406 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 TRBV12-3P01733 135 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 NOTCH4Q99466 2003 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 TRAV23DV6A0A075B6W5 121 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 RETNQ9HD89 108 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 WI2-2373I1.2A0A1W2PRP0 233 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 TDRG1Q3Y452 100 aa9.75□□□□□ -0.85
SPG11-203ENST00000535302 ANAPC1Q9H1A4 1944 aa9.74□□□□□ -0.85
SPG11-203ENST00000535302 FOXI1Q12951 378 aa9.74□□□□□ -0.85
SPG11-203ENST00000535302 C20orf78Q9BR46 151 aa9.74□□□□□ -0.85
SPG11-203ENST00000535302 HIGD2AQ9BW72 106 aa9.74□□□□□ -0.85
SPG11-203ENST00000535302 E7EUB6 86 aa9.74□□□□□ -0.85
SPG11-203ENST00000535302 H3BUA1 57 aa9.74□□□□□ -0.85
SPG11-203ENST00000535302 WFDC2Q14508 124 aa9.74□□□□□ -0.85
SPG11-203ENST00000535302 PATE2Q6UY27 113 aa9.74□□□□□ -0.85
SPG11-203ENST00000535302 DEFB125Q8N687 156 aa9.74□□□□□ -0.85
SPG11-203ENST00000535302 C5orf56Q8N8D9 126 aa9.74□□□□□ -0.85
SPG11-203ENST00000535302 A0A0U1RQV1 116 aa9.74□□□□□ -0.85
SPG11-203ENST00000535302 M0R2N4 97 aa9.74□□□□□ -0.85
SPG11-203ENST00000535302 C10orf105Q8TEF2 133 aa9.74□□□□□ -0.85
SPG11-203ENST00000535302 MED13LQ71F56 2210 aa9.74□□□□□ -0.85
SPG11-203ENST00000535302 Q8N9W7 124 aa9.73□□□□□ -0.85
SPG11-203ENST00000535302 NBASA2RRP1 2371 aa9.73□□□□□ -0.85
SPG11-203ENST00000535302 IGKV1-17P01599 117 aa9.73□□□□□ -0.85
SPG11-203ENST00000535302 WFDC10BQ8IUB3 73 aa9.73□□□□□ -0.85
SPG11-203ENST00000535302 C11orf52Q96A22 123 aa9.72□□□□□ -0.85
SPG11-203ENST00000535302 IGLV11-55A0A075B6I3 123 aa9.72□□□□□ -0.85
SPG11-203ENST00000535302 Q8N7P7 452 aa9.72□□□□□ -0.85
SPG11-203ENST00000535302 A0A0B4J2C4 111 aa9.72□□□□□ -0.85
SPG11-203ENST00000535302 NUPR1O60356 82 aa9.72□□□□□ -0.85
SPG11-203ENST00000535302 ZNF106Q9H2Y7 1883 aaKnown RBP9.72□□□□□ -0.85
SPG11-203ENST00000535302 ZNF747Q9BV97 191 aa9.71□□□□□ -0.85
SPG11-203ENST00000535302 SPAG11BQ08648 103 aa9.71□□□□□ -0.85
SPG11-203ENST00000535302 MIR7-3HGQ8N6C7 128 aa9.71□□□□□ -0.86
SPG11-203ENST00000535302 NDUFA1O15239 70 aa9.71□□□□□ -0.86
SPG11-203ENST00000535302 SLPIP03973 132 aa9.71□□□□□ -0.86
SPG11-203ENST00000535302 HERV-K104P63124 156 aa9.71□□□□□ -0.86
SPG11-203ENST00000535302 POU2AF1Q16633 256 aa9.71□□□□□ -0.86
SPG11-203ENST00000535302 MDFICQ9P1T7 246 aa9.71□□□□□ -0.86
SPG11-203ENST00000535302 DENND4CQ5VZ89 1909 aa9.71□□□□□ -0.86
SPG11-203ENST00000535302 IGLV2-18A0A075B6J9 118 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms