RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 IGLV2-23P01705 113 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 TRBV12-3P01733 135 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 HBDP02042 147 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 PRH1P02810 166 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 SCGB1C2P0DMR2 95 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 UBE2D3P61077 147 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 UBE2D2P62837 147 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 UBE2L3P68036 154 aaKnown RBP2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 REG3AQ06141 175 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 C12orf73Q69YU5 71 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 LYPD5Q6UWN5 251 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 SDIM1Q6ZPB5 146 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 DEFB132Q7Z7B7 95 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 GPHB5Q86YW7 130 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 ZNF563Q8TA94 476 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 H1FXQ92522 213 aaKnown RBP2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 TOMM6Q96B49 74 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 TRGV9Q99603 122 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 ZNF286AQ9HBT8 521 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 NXT2Q9NPJ8 142 aaKnown RBP2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 LINC00474Q9P2X8 69 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 CKLFQ9UBR5 152 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 HIVEP2P31629 2446 aa2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 MDC1Q14676 2089 aaKnown RBP2.11□□□□□ -2.07
ATPAF1-211ENST00000534216 ARHGAP32A7KAX9 2087 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 IGHV1-24A0A0C4DH33 117 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 IGKV1-8A0A0C4DH67 115 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 LOC389332A0A1B0GUA5 103 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 C12orf77C9JDV5 145 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 PEX7O00628 323 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 CCKP06307 115 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 SPTBP11277 2137 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 GCHFRP30047 84 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 ZNF791Q3KP31 576 aaPredicted RBP2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 C6orf99Q4VX62 202 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 TMEM155Q4W5P6 130 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 CLLU1OSQ5K130 101 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 TMEM170BQ5T4T1 132 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 C16orf47Q6ZP98 133 aaPredicted RBP2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 Q6ZR03 302 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 MARCH3Q86UD3 253 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 WFDC5Q8TCV5 224 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 MGST2Q99735 147 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 SMIM7Q9BQ49 75 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 MUC22E2RYF6 1773 aaPredicted RBP2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 TET2Q6N021 2002 aaPredicted RBP2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 HEATR5BQ9P2D3 2071 aa2.1□□□□□ -2.07
ATPAF1-211ENST00000534216 IGKV1D-17A0A075B6S4 117 aa2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 IGKV1-27A0A075B6S5 117 aa2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 IGHV3OR15-7A0A075B7D8 119 aa2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 IGHV6-1A0A0B4J1U7 121 aa2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 A0A0J9YXV3 536 aa2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 A6NN06 94 aa2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 CXCL8P10145 99 aa2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 RNASE4P34096 147 aaKnown RBP2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 DYNLT3P51808 116 aa2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 ATP5EP56381 51 aaPredicted RBP2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 C7orf65Q6ZTY9 151 aa2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 LINC00643Q86TS7 51 aa2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 DIRC1Q969H9 104 aa2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 FAM3DQ96BQ1 224 aa2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 TMEM243Q9BU79 118 aa2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 NHP2Q9NX24 153 aaKnown RBP2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 IL36BQ9NZH7 164 aa2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 EPDR1Q9UM22 224 aa2.09□□□□□ -2.07
ATPAF1-211ENST00000534216 COL5A1P20908 1838 aaPredicted RBP2.09□□□□□ -2.08
ATPAF1-211ENST00000534216 GOLGA4Q13439 2230 aaKnown RBP2.09□□□□□ -2.08
ATPAF1-211ENST00000534216 CABIN1Q9Y6J0 2220 aa2.09□□□□□ -2.08
ATPAF1-211ENST00000534216 H7BZZ5 65 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 PSPHP1O15172 72 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 NPYP01303 97 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 LTAP01374 205 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 IGKV1-17P01599 117 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 IGLV3-27P01718 113 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 ACYP1P07311 99 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 RNASE2P10153 161 aaKnown RBP2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 UBE2AP49459 152 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 SYNJ2BPP57105 145 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 RPL18Q07020 188 aaKnown RBP2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 CIRBPQ14011 172 aaKnown RBP2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 ZNF56Q15929 161 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 FBXL19-AS1Q494R0 122 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 LINC01554Q52M75 96 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 PSMG4Q5JS54 123 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 FAM104BQ5XKR9 115 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 LYPD2Q6UXB3 125 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 LINC00173Q6ZV60 143 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 C6orf201Q7Z4U5 140 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 ABHD14BQ96IU4 210 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 PROK2Q9HC23 129 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 XCL2Q9UBD3 114 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 LY96Q9Y6Y9 160 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 ESPL1Q14674 2120 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 TET1Q8NFU7 2136 aa2.08□□□□□ -2.08
ATPAF1-211ENST00000534216 ZNF407Q9C0G0 2248 aa2.07□□□□□ -2.08
ATPAF1-211ENST00000534216 TRBV7-3A0A075B6L6 115 aa2.07□□□□□ -2.08
ATPAF1-211ENST00000534216 TRBV7-1A0A0A6YYK4 115 aa2.07□□□□□ -2.08
ATPAF1-211ENST00000534216 IGHV1OR15-9A0A0B4J2B8 117 aa2.07□□□□□ -2.08
ATPAF1-211ENST00000534216 MYMXA0A1B0GTQ4 84 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms