RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 Q6ZR54 194 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 LINC00612Q8N6U2 182 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 DAND5Q8N907 189 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 DCAF4L2Q8NA75 395 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 THAP8Q8NA92 274 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 OR8A1Q8NGG7 326 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 KLK6Q92876 244 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 METTL26Q96S19 204 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 TMEM243Q9BU79 118 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 DEFB127Q9H1M4 99 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 PRO1854Q9UHT4 67 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 ADAMTS9Q9P2N4 1935 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 SPTA1P02549 2419 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 PCNX2A6NKB5 2137 aa3.11□□□□□ -1.91
ITGB1-219ENST00000534049 PLXNB3Q9ULL4 1909 aa3.11□□□□□ -1.91
ITGB1-219ENST00000534049 CABIN1Q9Y6J0 2220 aa3.11□□□□□ -1.91
ITGB1-219ENST00000534049 NBPF19A0A087WUL8 3843 aa3.11□□□□□ -1.91
ITGB1-219ENST00000534049 TRBV30A0A0K0K1B3 111 aa3.11□□□□□ -1.91
ITGB1-219ENST00000534049 SS18L1O75177 396 aaPredicted RBP3.11□□□□□ -1.91
ITGB1-219ENST00000534049 LTAP01374 205 aa3.11□□□□□ -1.91
ITGB1-219ENST00000534049 PIRTP0C851 137 aa3.11□□□□□ -1.91
ITGB1-219ENST00000534049 ZNF823P16415 610 aa3.11□□□□□ -1.91
ITGB1-219ENST00000534049 DAD1P61803 113 aa3.11□□□□□ -1.91
ITGB1-219ENST00000534049 ORMDL2Q53FV1 153 aa3.11□□□□□ -1.91
ITGB1-219ENST00000534049 C2orf82Q6UX34 121 aa3.11□□□□□ -1.91
ITGB1-219ENST00000534049 WFDC11Q8NEX6 87 aa3.11□□□□□ -1.91
ITGB1-219ENST00000534049 RPP21Q9H633 154 aaKnown RBP3.11□□□□□ -1.91
ITGB1-219ENST00000534049 TAC3Q9UHF0 121 aa3.11□□□□□ -1.91
ITGB1-219ENST00000534049 U3KQA8 63 aa3.11□□□□□ -1.91
ITGB1-219ENST00000534049 U3KQK5 164 aa3.11□□□□□ -1.91
ITGB1-219ENST00000534049 TLN1Q9Y490 2541 aaKnown RBP3.11□□□□□ -1.91
ITGB1-219ENST00000534049 PTPRBP23467 1997 aa3.11□□□□□ -1.91
ITGB1-219ENST00000534049 HECTD1Q9ULT8 2610 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 AGRNO00468 2067 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 PTPN13Q12923 2485 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 TMSB15BA0A087X1C1 80 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 TRAV3A0A0B4J244 114 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 TRAV12-1A0A0B4J245 112 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 A0A0D9SEW6 157 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 CXorf51AA0A1B0GTR3 108 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 A0A1W2PNU3 283 aaPredicted RBP3.1□□□□□ -1.91
ITGB1-219ENST00000534049 A8MU10 97 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 H3BP45 60 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 UBE2L6O14933 153 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 MRPS12O15235 138 aaKnown RBP3.1□□□□□ -1.91
ITGB1-219ENST00000534049 INAFM2P0DMQ5 153 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 MYCNOSP40205 109 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 UBE2E1P51965 193 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 FXYD3Q14802 87 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 S100A7L2Q5SY68 101 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 MIC13Q5XKP0 118 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 MDP1Q86V88 176 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 Q8N8P6 123 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 CYYR1Q96J86 154 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 UBE2E2Q96LR5 201 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 TM2D3Q9BRN9 247 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 COL12A1Q99715 3063 aa3.1□□□□□ -1.91
ITGB1-219ENST00000534049 UBR5O95071 2799 aaPredicted RBP3.1□□□□□ -1.91
ITGB1-219ENST00000534049 AHCTF1Q8WYP5 2266 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 CEP192Q8TEP8 1941 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 SCN2AQ99250 2005 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 IGKV1D-8A0A087WSZ0 117 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 TRBV27A0A0K0K1C4 114 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 TEX49A0A1B0GTD5 131 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 A0A1B0GUT8 65 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 RBMY1BA6NDE4 496 aaKnown RBP3.09□□□□□ -1.91
ITGB1-219ENST00000534049 RBMY1EA6NEQ0 496 aaKnown RBP3.09□□□□□ -1.91
ITGB1-219ENST00000534049 INS-IGF2F8WCM5 200 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 PRB1P04280 392 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 RBMY1DP0C7P1 496 aaKnown RBP3.09□□□□□ -1.91
ITGB1-219ENST00000534049 RBMY1A1P0DJD3 496 aaKnown RBP3.09□□□□□ -1.91
ITGB1-219ENST00000534049 RBMY1CP0DJD4 496 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 IAPPP10997 89 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 DUTP33316 252 aaKnown RBP3.09□□□□□ -1.91
ITGB1-219ENST00000534049 CKS2P33552 79 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 SAA4P35542 130 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 APOC4P55056 127 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 RBMY1FQ15415 496 aaKnown RBP3.09□□□□□ -1.91
ITGB1-219ENST00000534049 KISS1Q15726 138 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 ATP5EP2Q5VTU8 51 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 Q6JHZ5 121 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 CEMP1Q6PRD7 247 aaPredicted RBP3.09□□□□□ -1.91
ITGB1-219ENST00000534049 KTN1-AS1Q86SY8 53 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 ORMDL3Q8N138 153 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 ZCCHC24Q8N2G6 241 aaKnown RBP3.09□□□□□ -1.91
ITGB1-219ENST00000534049 LY6G5BQ8NDX9 201 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 UBALD1Q8TB05 177 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 EEF1AKMT3Q96AZ1 226 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 ZNF799Q96GE5 643 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 OVOL2Q9BRP0 275 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 ZNF355PQ9NSJ1 428 aa3.09□□□□□ -1.91
ITGB1-219ENST00000534049 LRRK2Q5S007 2527 aa3.09□□□□□ -1.92
ITGB1-219ENST00000534049 A0A096LNJ9 63 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 IGKV2D-26A0A0A0MRZ7 120 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 TRBV7-1A0A0A6YYK4 115 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 IGLV1-36A0A0B4J1U3 117 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 TRBV6-1A0A0K0K1D8 114 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 WI2-2373I1.2A0A1W2PRP0 233 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 SRRM4A7MD48 611 aaKnown RBP3.08□□□□□ -1.92
ITGB1-219ENST00000534049 SMKR1H3BMG3 65 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms