RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 SND1-IT1Q9HBX3 110 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 SVILO95425 2214 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 IGLV4-3A0A075B6K6 122 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 LOC107984640A0A0U1RRK4 108 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 H3BUX3 64 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 MALP21145 153 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 LCE2DQ5TA82 110 aaPredicted RBP3.06□□□□□ -1.92
SOX6-217ENST00000533870 SEM1Q6ZVN7 128 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 SPTAN1Q13813 2472 aaKnown RBP3.06□□□□□ -1.92
SOX6-217ENST00000533870 IGHV3-16A0A0C4DH30 117 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 PRAC2D3DTV9 90 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 RPL28P46779 137 aaKnown RBP3.06□□□□□ -1.92
SOX6-217ENST00000533870 AMELXQ99217 191 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 PKIGQ9Y2B9 76 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 MSRB2Q9Y3D2 182 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 FREM3P0C091 2139 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 MYO16Q9Y6X6 1858 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 E7EUB6 86 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 TMEM256-PLSCR3K7ERE1 68 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 IGHV3-11P01762 117 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 KLHL30-AS1Q8NEE0 82 aa3.06□□□□□ -1.92
SOX6-217ENST00000533870 A0A087WWL8 130 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 TRAV12-3A0A0B4J271 114 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 TGFAP01135 160 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 C1orf229Q6ZS94 237 aaPredicted RBP3.05□□□□□ -1.92
SOX6-217ENST00000533870 LINC01560Q8TB33 94 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 CCDC140Q96MF4 163 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 S4R3C0 116 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 V9GYY9 64 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 POLEQ07864 2286 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 PTPRDP23468 1912 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 TRIAP1O43715 76 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 FRMPD3Q5JV73 1810 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 CACNA1GO43497 2377 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 IGHV3-49A0A0A0MS15 119 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 TOMM7Q9P0U1 55 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 TRAV12-2A0A075B6T6 113 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 TRGV4A0A0C4DH28 118 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 SMIM9A6NGZ8 99 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 NDPQ00604 133 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 C10orf105Q8TEF2 133 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 MALRD1Q5VYJ5 2156 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 FAM236DA0A1B0GTK5 79 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 MSMBP08118 114 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 FAM236CP0DP71 79 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 IGLV5-45A0A087WSX0 123 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 KIF25-AS1Q9Y6Z4 181 aa3.05□□□□□ -1.92
SOX6-217ENST00000533870 CACNA1DQ01668 2161 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 FAM229AH3BQW9 127 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 CRLF1O75462 422 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 PSMB8P28062 276 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 HIST1H4AP62805 103 aaKnown RBP3.04□□□□□ -1.92
SOX6-217ENST00000533870 CHCHD7Q9BUK0 85 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 ZNF638Q14966 1978 aaKnown RBP3.04□□□□□ -1.92
SOX6-217ENST00000533870 SPTBN2O15020 2390 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 SHISA2Q6UWI4 295 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 IGHV3OR16-8A0A075B7F1 116 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 TRAV13-1A0A0B4J241 112 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 G3V318 75 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 TRBV6-4A0A1B0GX49 114 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 A6NDX4 124 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 KIF26BQ2KJY2 2108 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 C5orf56Q8N8D9 126 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 COX7B2Q8TF08 81 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 RTTNQ86VV8 2226 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 NAV2Q8IVL1 2488 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 IGKV3-7A0A075B6H7 116 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 F5H768 121 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 K7ENP7 123 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 RS1O15537 224 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 CRYGDP07320 174 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 DEFB131AP59861 70 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 STHQ8IWL8 128 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 C11orf21Q9P2W6 132 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 SCN3AQ9NY46 2000 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 IGLV5-39A0A0G2JS06 123 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 IGHV3-23P01764 117 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 CD24P25063 80 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 SDIM1Q6ZPB5 146 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 RPL39LQ96EH5 51 aaKnown RBP3.04□□□□□ -1.92
SOX6-217ENST00000533870 ZNRD1Q9P1U0 126 aa3.04□□□□□ -1.92
SOX6-217ENST00000533870 ASCC3Q8N3C0 2202 aaKnown RBP3.03□□□□□ -1.92
SOX6-217ENST00000533870 SDK2Q58EX2 2172 aa3.03□□□□□ -1.92
SOX6-217ENST00000533870 TRGV1A0A0A0MS02 117 aa3.03□□□□□ -1.92
SOX6-217ENST00000533870 NRGNQ92686 78 aa3.03□□□□□ -1.92
SOX6-217ENST00000533870 IGFL4Q6B9Z1 124 aa3.03□□□□□ -1.92
SOX6-217ENST00000533870 POLR2AP24928 1970 aaKnown RBP3.03□□□□□ -1.92
SOX6-217ENST00000533870 CCL24O00175 119 aa3.03□□□□□ -1.92
SOX6-217ENST00000533870 CCDC88CQ9P219 2028 aa3.03□□□□□ -1.92
SOX6-217ENST00000533870 VWA8A3KMH1 1905 aa3.03□□□□□ -1.92
SOX6-217ENST00000533870 IGLV4-69A0A075B6H9 119 aa3.03□□□□□ -1.92
SOX6-217ENST00000533870 F8WEM9 126 aa3.03□□□□□ -1.92
SOX6-217ENST00000533870 RNASE3P12724 160 aaKnown RBP3.03□□□□□ -1.92
SOX6-217ENST00000533870 DNAJC13O75165 2243 aa3.03□□□□□ -1.92
SOX6-217ENST00000533870 TDRD15B5MCY1 1934 aaKnown RBP3.03□□□□□ -1.93
SOX6-217ENST00000533870 USF3Q68DE3 2245 aa3.03□□□□□ -1.93
SOX6-217ENST00000533870 A0A087WZ39 114 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 IGHV3-66A0A0C4DH42 116 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 LECT2O14960 151 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 FUSP35637 526 aaKnown RBP eCLIP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms