RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 FAM208AQ9UK61 1670 aaKnown RBP0.94□□□□□ -2.26
CD44-234ENST00000531873 SPENQ96T58 3664 aaKnown RBP0.94□□□□□ -2.26
CD44-234ENST00000531873 BCORQ6W2J9 1755 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 RYR2Q92736 4967 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 IGKV2-40A0A087WW87 121 aaPredicted RBP0.94□□□□□ -2.26
CD44-234ENST00000531873 A0A087WX48 190 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 TRAV10A0A0B4J240 114 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 GNG14A0A1W2PPG7 69 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 H3BQV1 296 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 M0R233 179 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 INE1O15225 51 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 IGKV2D-40P01614 121 aaPredicted RBP0.94□□□□□ -2.26
CD44-234ENST00000531873 BCL2P10415 239 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 RPL7P18124 248 aaKnown RBP0.94□□□□□ -2.26
CD44-234ENST00000531873 S100A11P31949 105 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 RPL35P42766 123 aaKnown RBP0.94□□□□□ -2.26
CD44-234ENST00000531873 KRTAP10-4P60372 401 aaPredicted RBP0.94□□□□□ -2.26
CD44-234ENST00000531873 KLRD1Q13241 179 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 TMEM128Q5BJH2 165 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 HRCT1Q6UXD1 115 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 TMEM14EPQ6UXP3 125 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 C4orf22Q6V702 233 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 ZNF833PQ6ZTB9 187 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 TAC4Q86UU9 113 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.94□□□□□ -2.26
CD44-234ENST00000531873 C4orf3Q8WVX3 66 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 RAB37Q96AX2 223 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 ISOC1Q96CN7 298 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 HYLS1Q96M11 299 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 TP53RKQ96S44 253 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 GGACTQ9BVM4 153 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 CDC42SE1Q9NRR8 79 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 RASL12Q9NYN1 266 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 TAS2R7Q9NYW3 318 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 ZFP30Q9Y2G7 519 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 EDC4Q6P2E9 1401 aaKnown RBP0.94□□□□□ -2.26
CD44-234ENST00000531873 DUOX1Q9NRD9 1551 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 BSNQ9UPA5 3926 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 LRRC37AA6NMS7 1700 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 IBTKQ9P2D0 1353 aaPredicted RBP0.94□□□□□ -2.26
CD44-234ENST00000531873 SPTBP11277 2137 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 DMBT1Q9UGM3 2413 aaPredicted RBP0.94□□□□□ -2.26
CD44-234ENST00000531873 STAB2Q8WWQ8 2551 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 FSIP2Q5CZC0 6907 aa0.94□□□□□ -2.26
CD44-234ENST00000531873 FANCMQ8IYD8 2048 aa0.93□□□□□ -2.26
CD44-234ENST00000531873 UBR3Q6ZT12 1888 aa0.93□□□□□ -2.26
CD44-234ENST00000531873 IFT172Q9UG01 1749 aa0.93□□□□□ -2.26
CD44-234ENST00000531873 DAPK1P53355 1430 aa0.93□□□□□ -2.26
CD44-234ENST00000531873 PRORSD1PA6NEY8 169 aa0.93□□□□□ -2.26
CD44-234ENST00000531873 E7EQ34 232 aa0.93□□□□□ -2.26
CD44-234ENST00000531873 GABARAPH6UMI1 98 aa0.93□□□□□ -2.26
CD44-234ENST00000531873 PIN1P1O15428 100 aa0.93□□□□□ -2.26
CD44-234ENST00000531873 IFNA4P05014 189 aa0.93□□□□□ -2.26
CD44-234ENST00000531873 CD2P06729 351 aa0.93□□□□□ -2.26
CD44-234ENST00000531873 POLR2HP52434 150 aaKnown RBP0.93□□□□□ -2.26
CD44-234ENST00000531873 EIF3IQ13347 325 aaKnown RBP0.93□□□□□ -2.26
CD44-234ENST00000531873 TOMM20LQ6UXN7 152 aa0.93□□□□□ -2.26
CD44-234ENST00000531873 OBSCN-AS1Q96MR7 158 aa0.93□□□□□ -2.26
CD44-234ENST00000531873 MED31Q9Y3C7 131 aa0.93□□□□□ -2.26
CD44-234ENST00000531873 NBPF19A0A087WUL8 3843 aa0.93□□□□□ -2.26
CD44-234ENST00000531873 PLXNA1Q9UIW2 1896 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 TOGARAM1Q9Y4F4 1720 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 MED13LQ71F56 2210 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 HERC2O95714 4834 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 TRAV27A0A087WT01 109 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 OR2T8A6NH00 312 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 KPNA4O00629 521 aaPredicted RBP0.92□□□□□ -2.26
CD44-234ENST00000531873 GEMIN2O14893 280 aaKnown RBP0.92□□□□□ -2.26
CD44-234ENST00000531873 ERC2-IT1O76042 136 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 ANGP03950 147 aaKnown RBP0.92□□□□□ -2.26
CD44-234ENST00000531873 CROCCP2Q86T23 111 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 FAM19A2Q8N3H0 131 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 FAM216BQ8N7L0 139 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 PSMF1Q92530 271 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 MUCL1Q96DR8 90 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 LINC00052Q96N35 136 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 CCDC115Q96NT0 180 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 TRAPPC2LQ9UL33 140 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 LAMTOR2Q9Y2Q5 125 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 TACC2O95359 2948 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 IQGAP3Q86VI3 1631 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 CRYBG1Q9Y4K1 1723 aa0.92□□□□□ -2.26
CD44-234ENST00000531873 SRRM2Q9UQ35 2752 aaKnown RBP0.91□□□□□ -2.26
CD44-234ENST00000531873 MYH1P12882 1939 aa0.91□□□□□ -2.26
CD44-234ENST00000531873 PTPRDP23468 1912 aa0.91□□□□□ -2.26
CD44-234ENST00000531873 GCC2Q8IWJ2 1684 aa0.91□□□□□ -2.26
CD44-234ENST00000531873 HERC1Q15751 4861 aa0.91□□□□□ -2.26
CD44-234ENST00000531873 VPS8Q8N3P4 1428 aa0.91□□□□□ -2.26
CD44-234ENST00000531873 TRBV6-7A0A0A0MS04 114 aa0.91□□□□□ -2.26
CD44-234ENST00000531873 IGHV1-58A0A0C4DH39 117 aa0.91□□□□□ -2.26
CD44-234ENST00000531873 TRBV6-4A0A1B0GX49 114 aa0.91□□□□□ -2.26
CD44-234ENST00000531873 hDV103S1A0JD37 113 aa0.91□□□□□ -2.26
CD44-234ENST00000531873 CCL25O15444 150 aa0.91□□□□□ -2.26
CD44-234ENST00000531873 PFDN1O60925 122 aa0.91□□□□□ -2.26
CD44-234ENST00000531873 CXCL8P10145 99 aa0.91□□□□□ -2.26
CD44-234ENST00000531873 FABP2P12104 132 aa0.91□□□□□ -2.26
CD44-234ENST00000531873 ZNF25P17030 456 aaPredicted RBP0.91□□□□□ -2.26
CD44-234ENST00000531873 RPS3P23396 243 aaKnown RBP eCLIP0.91□□□□□ -2.26
CD44-234ENST00000531873 S100GP29377 79 aa0.91□□□□□ -2.26
CD44-234ENST00000531873 MPV17LQ2QL34 196 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms