RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 NIT1Q86X76 327 aa13.62□□□□□ -0.23
TSPAN4-219ENST00000530404 URGCP-MRPS24S4R325 110 aa13.62□□□□□ -0.23
TSPAN4-219ENST00000530404 TMSB15BA0A087X1C1 80 aa13.61□□□□□ -0.23
TSPAN4-219ENST00000530404 CTXND1A0A1B0GTU2 59 aa13.61□□□□□ -0.23
TSPAN4-219ENST00000530404 RBFOX3A6NFN3 312 aa13.61□□□□□ -0.23
TSPAN4-219ENST00000530404 FAM74A7A6NL05 159 aa13.61□□□□□ -0.23
TSPAN4-219ENST00000530404 SYT8Q8NBV8 401 aa13.61□□□□□ -0.23
TSPAN4-219ENST00000530404 OR11H4Q8NGC9 324 aa13.61□□□□□ -0.23
TSPAN4-219ENST00000530404 RNF222A6NCQ9 220 aa13.6□□□□□ -0.23
TSPAN4-219ENST00000530404 RHODO00212 210 aa13.6□□□□□ -0.23
TSPAN4-219ENST00000530404 M0R381 172 aa13.59□□□□□ -0.23
TSPAN4-219ENST00000530404 DNLZQ5SXM8 178 aa13.59□□□□□ -0.23
TSPAN4-219ENST00000530404 UBE2WQ96B02 151 aa13.59□□□□□ -0.23
TSPAN4-219ENST00000530404 RMI2Q96E14 147 aa13.59□□□□□ -0.23
TSPAN4-219ENST00000530404 COX11Q9Y6N1 276 aa13.59□□□□□ -0.23
TSPAN4-219ENST00000530404 FXYD6-FXYD2A0A087WZ82 144 aa13.58□□□□□ -0.24
TSPAN4-219ENST00000530404 KRTAP29-1A8MX34 341 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-219ENST00000530404 INO80EQ8NBZ0 244 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-219ENST00000530404 SFRP2Q96HF1 295 aa13.58□□□□□ -0.24
TSPAN4-219ENST00000530404 PHLDA3Q9Y5J5 127 aa13.58□□□□□ -0.24
TSPAN4-219ENST00000530404 BORCS7-ASMTA0A0B4J1R7 106 aa13.57□□□□□ -0.24
TSPAN4-219ENST00000530404 Q8N976 141 aa13.57□□□□□ -0.24
TSPAN4-219ENST00000530404 DEFB104AQ8WTQ1 72 aa13.57□□□□□ -0.24
TSPAN4-219ENST00000530404 HIST1H2BAQ96A08 127 aa13.57□□□□□ -0.24
TSPAN4-219ENST00000530404 A0A087WX48 190 aa13.56□□□□□ -0.24
TSPAN4-219ENST00000530404 TPT1P13693 172 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-219ENST00000530404 AKR1C8PQ5T2L2 129 aa13.56□□□□□ -0.24
TSPAN4-219ENST00000530404 FAM162BQ5T6X4 162 aa13.56□□□□□ -0.24
TSPAN4-219ENST00000530404 GIPP09681 153 aaPredicted RBP13.55□□□□□ -0.24
TSPAN4-219ENST00000530404 UBE2G1P62253 170 aa13.55□□□□□ -0.24
TSPAN4-219ENST00000530404 ZFP30Q9Y2G7 519 aa13.55□□□□□ -0.24
TSPAN4-219ENST00000530404 ZNF674Q2M3X9 581 aa13.54□□□□□ -0.24
TSPAN4-219ENST00000530404 COX8CQ7Z4L0 72 aa13.54□□□□□ -0.24
TSPAN4-219ENST00000530404 FMC1Q96HJ9 113 aa13.54□□□□□ -0.24
TSPAN4-219ENST00000530404 CHAC1Q9BUX1 264 aa13.54□□□□□ -0.24
TSPAN4-219ENST00000530404 HMCN2Q8NDA2 5059 aa13.54□□□□□ -0.24
TSPAN4-219ENST00000530404 MAP1LC3B2A6NCE7 125 aa13.53□□□□□ -0.24
TSPAN4-219ENST00000530404 PTTG1O95997 202 aa13.53□□□□□ -0.24
TSPAN4-219ENST00000530404 SEC11BP0C7V7 166 aa13.53□□□□□ -0.24
TSPAN4-219ENST00000530404 KRTAP10-4P60372 401 aaPredicted RBP13.53□□□□□ -0.24
TSPAN4-219ENST00000530404 UBE2D3P61077 147 aa13.53□□□□□ -0.24
TSPAN4-219ENST00000530404 UBE2D2P62837 147 aa13.53□□□□□ -0.24
TSPAN4-219ENST00000530404 RPL36AP83881 106 aaKnown RBP13.53□□□□□ -0.24
TSPAN4-219ENST00000530404 LINC01559Q495D7 138 aa13.53□□□□□ -0.24
TSPAN4-219ENST00000530404 KCNIP4Q6PIL6 250 aa13.53□□□□□ -0.24
TSPAN4-219ENST00000530404 ZFP82Q8N141 532 aa13.53□□□□□ -0.24
TSPAN4-219ENST00000530404 CIRBP-AS1Q8TBR5 109 aa13.53□□□□□ -0.24
TSPAN4-219ENST00000530404 RPL36ALQ969Q0 106 aaKnown RBP13.53□□□□□ -0.24
TSPAN4-219ENST00000530404 NKX6-2Q9C056 277 aaPredicted RBP13.53□□□□□ -0.24
TSPAN4-219ENST00000530404 MAP1LC3BQ9GZQ8 125 aa13.53□□□□□ -0.24
TSPAN4-219ENST00000530404 TRBV7-3A0A075B6L6 115 aa13.51□□□□□ -0.25
TSPAN4-219ENST00000530404 TMEM262E9PQX1 116 aa13.51□□□□□ -0.25
TSPAN4-219ENST00000530404 LTAP01374 205 aa13.51□□□□□ -0.25
TSPAN4-219ENST00000530404 ELOBQ15370 118 aa13.51□□□□□ -0.25
TSPAN4-219ENST00000530404 CST9LP1Q5W188 147 aa13.51□□□□□ -0.25
TSPAN4-219ENST00000530404 CHCHD7Q9BUK0 85 aa13.51□□□□□ -0.25
TSPAN4-219ENST00000530404 TRBV10-1A0A0K0K1A3 114 aa13.5□□□□□ -0.25
TSPAN4-219ENST00000530404 AKR1C3P42330 323 aa13.5□□□□□ -0.25
TSPAN4-219ENST00000530404 RPL19P84098 196 aaKnown RBP13.5□□□□□ -0.25
TSPAN4-219ENST00000530404 ATRAIDQ6UW56 229 aa13.5□□□□□ -0.25
TSPAN4-219ENST00000530404 ENHOQ6UWT2 76 aa13.5□□□□□ -0.25
TSPAN4-219ENST00000530404 C15orf54Q8N8G6 183 aa13.5□□□□□ -0.25
TSPAN4-219ENST00000530404 ZNF56Q15929 161 aa13.49□□□□□ -0.25
TSPAN4-219ENST00000530404 MPV17L2Q567V2 206 aa13.49□□□□□ -0.25
TSPAN4-219ENST00000530404 NEXN-AS1Q8NBZ9 246 aa13.49□□□□□ -0.25
TSPAN4-219ENST00000530404 C1orf43Q9BWL3 253 aa13.49□□□□□ -0.25
TSPAN4-219ENST00000530404 TRBV6-1A0A0K0K1D8 114 aa13.48□□□□□ -0.25
TSPAN4-219ENST00000530404 G3V3Q6 166 aa13.48□□□□□ -0.25
TSPAN4-219ENST00000530404 FHITP49789 147 aa13.48□□□□□ -0.25
TSPAN4-219ENST00000530404 Q0VG73 95 aa13.48□□□□□ -0.25
TSPAN4-219ENST00000530404 OR10AG1Q8NH19 301 aa13.48□□□□□ -0.25
TSPAN4-219ENST00000530404 CYTL1Q9NRR1 136 aa13.48□□□□□ -0.25
TSPAN4-219ENST00000530404 TRBV6-8A0A0A6YYG3 113 aa13.47□□□□□ -0.25
TSPAN4-219ENST00000530404 MUC21A0A0G2JKD1 596 aa13.47□□□□□ -0.25
TSPAN4-219ENST00000530404 MUC21A0A140T8X8 626 aa13.47□□□□□ -0.25
TSPAN4-219ENST00000530404 IGLV2-8P01709 118 aa13.47□□□□□ -0.25
TSPAN4-219ENST00000530404 OR10G8Q8NGN5 311 aa13.47□□□□□ -0.25
TSPAN4-219ENST00000530404 STOML3Q8TAV4 291 aa13.47□□□□□ -0.25
TSPAN4-219ENST00000530404 ARPC5O15511 151 aa13.46□□□□□ -0.25
TSPAN4-219ENST00000530404 PAGE4O60829 102 aa13.46□□□□□ -0.25
TSPAN4-219ENST00000530404 HLA-DQA1P01909 254 aa13.46□□□□□ -0.25
TSPAN4-219ENST00000530404 CRPP02741 224 aa13.46□□□□□ -0.25
TSPAN4-219ENST00000530404 ANGP03950 147 aaKnown RBP13.46□□□□□ -0.25
TSPAN4-219ENST00000530404 A0A1B0GV50 99 aa13.45□□□□□ -0.26
TSPAN4-219ENST00000530404 RAB4BP61018 213 aa13.45□□□□□ -0.26
TSPAN4-219ENST00000530404 SSTP61278 116 aa13.45□□□□□ -0.26
TSPAN4-219ENST00000530404 C14orf177Q52M58 125 aa13.44□□□□□ -0.26
TSPAN4-219ENST00000530404 CLPSL2Q6UWE3 100 aa13.44□□□□□ -0.26
TSPAN4-219ENST00000530404 CHCHD5Q9BSY4 110 aa13.44□□□□□ -0.26
TSPAN4-219ENST00000530404 UBR4Q5T4S7 5183 aa13.44□□□□□ -0.26
TSPAN4-219ENST00000530404 SCO2A0A1W2PP80 73 aa13.43□□□□□ -0.26
TSPAN4-219ENST00000530404 USP17L23D6RBM5 183 aa13.43□□□□□ -0.26
TSPAN4-219ENST00000530404 PRR27Q6MZM9 219 aa13.43□□□□□ -0.26
TSPAN4-219ENST00000530404 TCEAL7Q9BRU2 100 aa13.43□□□□□ -0.26
TSPAN4-219ENST00000530404 SMLR1H3BR10 107 aa13.42□□□□□ -0.26
TSPAN4-219ENST00000530404 ZNF471Q9BX82 626 aaPredicted RBP13.42□□□□□ -0.26
TSPAN4-219ENST00000530404 F5H697 171 aa13.41□□□□□ -0.26
TSPAN4-219ENST00000530404 PRSS1P07477 247 aa13.41□□□□□ -0.26
TSPAN4-219ENST00000530404 NTM-AS1Q6ZSK4 140 aa13.41□□□□□ -0.26
TSPAN4-219ENST00000530404 SNAI2O43623 268 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms