RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-208ENST00000528475 HERVK_113P61574 105 aa17.41■□□□□ 0.38
GSDMD-208ENST00000528475 SCGB2A2Q13296 93 aa17.41■□□□□ 0.38
GSDMD-208ENST00000528475 K7EQG2 157 aa17.4■□□□□ 0.38
GSDMD-208ENST00000528475 SYT8Q8NBV8 401 aa17.4■□□□□ 0.38
GSDMD-208ENST00000528475 TEX48A0A1B0GUV7 120 aa17.4■□□□□ 0.38
GSDMD-208ENST00000528475 TMEM238LA0A1B0GVL6 79 aa17.4■□□□□ 0.38
GSDMD-208ENST00000528475 A6NJY4 79 aa17.4■□□□□ 0.38
GSDMD-208ENST00000528475 HOXA3O43365 443 aaPredicted RBP17.4■□□□□ 0.38
GSDMD-208ENST00000528475 SNRPD3P62318 126 aaKnown RBP17.4■□□□□ 0.38
GSDMD-208ENST00000528475 IGSF10Q6WRI0 2623 aa17.39■□□□□ 0.37
GSDMD-208ENST00000528475 F5H697 171 aa17.39■□□□□ 0.37
GSDMD-208ENST00000528475 ZNF688P0C7X2 276 aa17.39■□□□□ 0.37
GSDMD-208ENST00000528475 RPL24P83731 157 aaKnown RBP17.39■□□□□ 0.37
GSDMD-208ENST00000528475 WFDC12Q8WWY7 111 aa17.39■□□□□ 0.37
GSDMD-208ENST00000528475 MORN3Q6PF18 240 aaPredicted RBP17.38■□□□□ 0.37
GSDMD-208ENST00000528475 IGHV4-59P01825 116 aa17.38■□□□□ 0.37
GSDMD-208ENST00000528475 DEFB112Q30KQ8 113 aa17.38■□□□□ 0.37
GSDMD-208ENST00000528475 CD300EQ496F6 205 aaPredicted RBP17.38■□□□□ 0.37
GSDMD-208ENST00000528475 SCGB1D4Q6XE38 83 aa17.38■□□□□ 0.37
GSDMD-208ENST00000528475 PLEKHB2Q96CS7 222 aa17.38■□□□□ 0.37
GSDMD-208ENST00000528475 PRB1P04280 392 aa17.37■□□□□ 0.37
GSDMD-208ENST00000528475 RPL39P62891 51 aaKnown RBP17.37■□□□□ 0.37
GSDMD-208ENST00000528475 RNF152Q8N8N0 203 aa17.37■□□□□ 0.37
GSDMD-208ENST00000528475 CFAP46Q8IYW2 2715 aa17.36■□□□□ 0.37
GSDMD-208ENST00000528475 UBE2D1P51668 147 aa17.36■□□□□ 0.37
GSDMD-208ENST00000528475 SPANXB1Q9NS25 103 aaPredicted RBP17.36■□□□□ 0.37
GSDMD-208ENST00000528475 M0QY20 66 aa17.36■□□□□ 0.37
GSDMD-208ENST00000528475 RHOHQ15669 191 aa17.36■□□□□ 0.37
GSDMD-208ENST00000528475 ZNF876PQ49A33 203 aa17.36■□□□□ 0.37
GSDMD-208ENST00000528475 BBC3Q96PG8 261 aaPredicted RBP17.36■□□□□ 0.37
GSDMD-208ENST00000528475 MDFICQ9P1T7 246 aa17.36■□□□□ 0.37
GSDMD-208ENST00000528475 SPTAN1Q13813 2472 aaKnown RBP17.36■□□□□ 0.37
GSDMD-208ENST00000528475 IGHV1OR15-1A0A075B7D0 117 aa17.35■□□□□ 0.37
GSDMD-208ENST00000528475 H3BMG7 143 aa17.35■□□□□ 0.37
GSDMD-208ENST00000528475 WFDC2Q14508 124 aa17.35■□□□□ 0.37
GSDMD-208ENST00000528475 NSUN5P1Q3KNT7 163 aa17.35■□□□□ 0.37
GSDMD-208ENST00000528475 C10orf99Q6UWK7 81 aa17.35■□□□□ 0.37
GSDMD-208ENST00000528475 Q8N1Y9 231 aa17.35■□□□□ 0.37
GSDMD-208ENST00000528475 ZFHX3Q15911 3703 aa17.34■□□□□ 0.37
GSDMD-208ENST00000528475 KLHL30-AS1Q8NEE0 82 aa17.34■□□□□ 0.37
GSDMD-208ENST00000528475 PRO0461Q9UI25 63 aa17.34■□□□□ 0.37
GSDMD-208ENST00000528475 A0A0J9YY99 117 aa17.33■□□□□ 0.37
GSDMD-208ENST00000528475 SRSF9Q13242 221 aaKnown RBP eCLIP17.33■□□□□ 0.371e-7■□□□□ 10.2
GSDMD-208ENST00000528475 TRPT1Q86TN4 253 aaKnown RBP17.33■□□□□ 0.37
GSDMD-208ENST00000528475 LINC01356Q8N9X3 169 aa17.33■□□□□ 0.37
GSDMD-208ENST00000528475 TRAV12-2A0A075B6T6 113 aa17.33■□□□□ 0.36
GSDMD-208ENST00000528475 GAGE13Q4V321 117 aa17.33■□□□□ 0.36
GSDMD-208ENST00000528475 FAM74A4Q5TZK3 123 aa17.33■□□□□ 0.36
GSDMD-208ENST00000528475 J3QLI3 93 aa17.32■□□□□ 0.36
GSDMD-208ENST00000528475 PGPEP1Q9NXJ5 209 aa17.32■□□□□ 0.36
GSDMD-208ENST00000528475 ZNF256Q9Y2P7 627 aaPredicted RBP17.32■□□□□ 0.36
GSDMD-208ENST00000528475 ZNF56Q15929 161 aa17.32■□□□□ 0.36
GSDMD-208ENST00000528475 AMTNQ6UX39 209 aa17.32■□□□□ 0.36
GSDMD-208ENST00000528475 NFE4Q86UQ8 179 aa17.32■□□□□ 0.36
GSDMD-208ENST00000528475 EMP1P54849 157 aa17.31■□□□□ 0.36
GSDMD-208ENST00000528475 ZNRF2Q8NHG8 242 aa17.31■□□□□ 0.36
GSDMD-208ENST00000528475 IGKV3-20P01619 116 aa17.3■□□□□ 0.36
GSDMD-208ENST00000528475 USP24Q9UPU5 2620 aa17.3■□□□□ 0.36
GSDMD-208ENST00000528475 J3QR89 54 aa17.3■□□□□ 0.36
GSDMD-208ENST00000528475 ELANEP08246 267 aa17.3■□□□□ 0.36
GSDMD-208ENST00000528475 SPINK13Q1W4C9 94 aa17.3■□□□□ 0.36
GSDMD-208ENST00000528475 MRPL16Q9NX20 251 aaKnown RBP17.3■□□□□ 0.36
GSDMD-208ENST00000528475 TRGV11A0A075B6L2 103 aa17.28■□□□□ 0.36
GSDMD-208ENST00000528475 A0A096LNT2 108 aa17.28■□□□□ 0.36
GSDMD-208ENST00000528475 SYNJ2BPP57105 145 aa17.28■□□□□ 0.36
GSDMD-208ENST00000528475 TMEM170BQ5T4T1 132 aa17.28■□□□□ 0.36
GSDMD-208ENST00000528475 ZNF843Q8N446 348 aa17.28■□□□□ 0.36
GSDMD-208ENST00000528475 DEFB104AQ8WTQ1 72 aa17.28■□□□□ 0.36
GSDMD-208ENST00000528475 TSPEAR-AS2P59090 65 aa17.28■□□□□ 0.36
GSDMD-208ENST00000528475 SLC25A29Q8N8R3 303 aa17.28■□□□□ 0.36
GSDMD-208ENST00000528475 AMELXQ99217 191 aa17.27■□□□□ 0.36
GSDMD-208ENST00000528475 EDA2RQ9HAV5 297 aa17.27■□□□□ 0.36
GSDMD-208ENST00000528475 P0DMU3 169 aa17.27■□□□□ 0.35
GSDMD-208ENST00000528475 FAM231AP0DMU4 169 aa17.27■□□□□ 0.35
GSDMD-208ENST00000528475 FAM231CP0DMU5 169 aa17.27■□□□□ 0.35
GSDMD-208ENST00000528475 TSPAN13O95857 204 aa17.26■□□□□ 0.35
GSDMD-208ENST00000528475 C20orf203Q8NBC4 194 aa17.26■□□□□ 0.35
GSDMD-208ENST00000528475 UBE2E2Q96LR5 201 aa17.26■□□□□ 0.35
GSDMD-208ENST00000528475 VPREB3Q9UKI3 123 aa17.26■□□□□ 0.35
GSDMD-208ENST00000528475 I3L3M4 83 aa17.25■□□□□ 0.35
GSDMD-208ENST00000528475 IGHV3-30P01768 117 aa17.25■□□□□ 0.35
GSDMD-208ENST00000528475 IGHV3-30-5P0DP03 117 aa17.25■□□□□ 0.35
GSDMD-208ENST00000528475 ETDBQ3ZM63 59 aa17.25■□□□□ 0.35
GSDMD-208ENST00000528475 DLX4Q92988 240 aaPredicted RBP17.25■□□□□ 0.35
GSDMD-208ENST00000528475 J3QQQ9 107 aa17.25■□□□□ 0.35
GSDMD-208ENST00000528475 UBE2D3P61077 147 aa17.25■□□□□ 0.35
GSDMD-208ENST00000528475 UBE2D2P62837 147 aa17.25■□□□□ 0.35
GSDMD-208ENST00000528475 HOXD3P31249 432 aaPredicted RBP17.24■□□□□ 0.35
GSDMD-208ENST00000528475 SH2D6Q7Z4S9 175 aa17.24■□□□□ 0.35
GSDMD-208ENST00000528475 NDUFA11Q86Y39 141 aa17.24■□□□□ 0.35
GSDMD-208ENST00000528475 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.24■□□□□ 0.351e-7■■□□□ 13
GSDMD-208ENST00000528475 TMEM223A0PJW6 202 aa17.23■□□□□ 0.35
GSDMD-208ENST00000528475 LEPROTO15243 131 aa17.23■□□□□ 0.35
GSDMD-208ENST00000528475 LYRM7Q5U5X0 104 aa17.23■□□□□ 0.35
GSDMD-208ENST00000528475 LGALS3P17931 250 aaKnown RBP17.22■□□□□ 0.35
GSDMD-208ENST00000528475 NRGNQ92686 78 aa17.22■□□□□ 0.35
GSDMD-208ENST00000528475 SPAG8Q99932 426 aaPredicted RBP17.22■□□□□ 0.35
GSDMD-208ENST00000528475 ZNF702PQ9H963 129 aa17.22■□□□□ 0.35
GSDMD-208ENST00000528475 CELSR1Q9NYQ6 3014 aa17.22■□□□□ 0.35
GSDMD-208ENST00000528475 DOPEY1Q5JWR5 2465 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 215.8 ms