RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.5□□□□□ -1.53
SORL1-207ENST00000528339 HIST1H2BHQ93079 126 aa5.5□□□□□ -1.53
SORL1-207ENST00000528339 HIST1H2BNQ99877 126 aa5.5□□□□□ -1.53
SORL1-207ENST00000528339 HIST1H2BMQ99879 126 aa5.5□□□□□ -1.53
SORL1-207ENST00000528339 CELA1Q9UNI1 258 aa5.5□□□□□ -1.53
SORL1-207ENST00000528339 TRBV27A0A0K0K1C4 114 aa5.5□□□□□ -1.53
SORL1-207ENST00000528339 HOXA5P20719 270 aa5.5□□□□□ -1.53
SORL1-207ENST00000528339 ZNF415Q09FC8 603 aa5.5□□□□□ -1.53
SORL1-207ENST00000528339 SAMD10Q9BYL1 202 aa5.5□□□□□ -1.53
SORL1-207ENST00000528339 RPH3ALQ9UNE2 315 aa5.5□□□□□ -1.53
SORL1-207ENST00000528339 TRAV26-1A0A087WT03 109 aa5.49□□□□□ -1.53
SORL1-207ENST00000528339 IGHV4-28A0A0C4DH34 117 aa5.49□□□□□ -1.53
SORL1-207ENST00000528339 PDZD11Q5EBL8 140 aa5.49□□□□□ -1.53
SORL1-207ENST00000528339 MGST1P10620 155 aaKnown RBP5.49□□□□□ -1.53
SORL1-207ENST00000528339 NUTF2P61970 127 aaKnown RBP5.49□□□□□ -1.53
SORL1-207ENST00000528339 KCNIP4Q6PIL6 250 aa5.49□□□□□ -1.53
SORL1-207ENST00000528339 PGLYRP4Q96LB8 373 aa5.49□□□□□ -1.53
SORL1-207ENST00000528339 IGKV3-7A0A075B6H7 116 aa5.49□□□□□ -1.53
SORL1-207ENST00000528339 K7EMI3 77 aa5.49□□□□□ -1.53
SORL1-207ENST00000528339 RPL11P62913 178 aaKnown RBP5.49□□□□□ -1.53
SORL1-207ENST00000528339 XKRY2A2RUG3 117 aa5.48□□□□□ -1.53
SORL1-207ENST00000528339 NPSP0C0P6 89 aa5.48□□□□□ -1.53
SORL1-207ENST00000528339 SYT8Q8NBV8 401 aa5.48□□□□□ -1.53
SORL1-207ENST00000528339 H3BVH4 76 aa5.48□□□□□ -1.53
SORL1-207ENST00000528339 M0R036 132 aa5.48□□□□□ -1.53
SORL1-207ENST00000528339 FXYD7P58549 80 aa5.48□□□□□ -1.53
SORL1-207ENST00000528339 C18orf32Q8TCD1 76 aa5.48□□□□□ -1.53
SORL1-207ENST00000528339 XCL2Q9UBD3 114 aa5.48□□□□□ -1.53
SORL1-207ENST00000528339 TRBV6-4A0A1B0GX49 114 aa5.48□□□□□ -1.53
SORL1-207ENST00000528339 A8MWV9 139 aa5.48□□□□□ -1.53
SORL1-207ENST00000528339 C12orf74Q32Q52 190 aa5.48□□□□□ -1.53
SORL1-207ENST00000528339 FAM159AQ6UWV7 190 aa5.48□□□□□ -1.53
SORL1-207ENST00000528339 VSIG2Q96IQ7 327 aa5.48□□□□□ -1.53
SORL1-207ENST00000528339 C20orf78Q9BR46 151 aa5.48□□□□□ -1.53
SORL1-207ENST00000528339 GOLT1BQ9Y3E0 138 aa5.48□□□□□ -1.53
SORL1-207ENST00000528339 Q8N976 141 aa5.47□□□□□ -1.53
SORL1-207ENST00000528339 DPH3P1Q9H4G8 78 aa5.47□□□□□ -1.53
SORL1-207ENST00000528339 TEX48A0A1B0GUV7 120 aa5.47□□□□□ -1.53
SORL1-207ENST00000528339 GTSF1LQ9H1H1 148 aa5.47□□□□□ -1.53
SORL1-207ENST00000528339 JPT2Q9H910 190 aa5.47□□□□□ -1.53
SORL1-207ENST00000528339 LOC105371267A0A1B0GV96 52 aa5.47□□□□□ -1.53
SORL1-207ENST00000528339 PPBPP02775 128 aa5.47□□□□□ -1.53
SORL1-207ENST00000528339 RPS10P46783 165 aaKnown RBP5.47□□□□□ -1.53
SORL1-207ENST00000528339 RIGQ13278 110 aa5.47□□□□□ -1.53
SORL1-207ENST00000528339 SUMO4Q6EEV6 95 aa5.47□□□□□ -1.53
SORL1-207ENST00000528339 DNAJC30Q96LL9 226 aa5.47□□□□□ -1.53
SORL1-207ENST00000528339 RCHY1Q96PM5 261 aa5.47□□□□□ -1.53
SORL1-207ENST00000528339 MRPL18Q9H0U6 180 aaKnown RBP5.47□□□□□ -1.53
SORL1-207ENST00000528339 Q9UF83 564 aa5.47□□□□□ -1.53
SORL1-207ENST00000528339 GRIFINA4D1Z8 144 aa5.46□□□□□ -1.53
SORL1-207ENST00000528339 NHLRC4P0CG21 123 aaPredicted RBP5.46□□□□□ -1.53
SORL1-207ENST00000528339 Q6ZTI0 123 aa5.46□□□□□ -1.53
SORL1-207ENST00000528339 TRBV10-1A0A0K0K1A3 114 aa5.46□□□□□ -1.54
SORL1-207ENST00000528339 CBY3A6NI87 242 aa5.46□□□□□ -1.54
SORL1-207ENST00000528339 UBE2D3P61077 147 aa5.46□□□□□ -1.54
SORL1-207ENST00000528339 UBE2D2P62837 147 aa5.46□□□□□ -1.54
SORL1-207ENST00000528339 NOTCH3Q9UM47 2321 aa5.46□□□□□ -1.54
SORL1-207ENST00000528339 TRGC2P03986 189 aa5.46□□□□□ -1.54
SORL1-207ENST00000528339 EVI2AP22794 236 aa5.46□□□□□ -1.54
SORL1-207ENST00000528339 NUPR1O60356 82 aa5.45□□□□□ -1.54
SORL1-207ENST00000528339 TRGC1P0CF51 173 aa5.45□□□□□ -1.54
SORL1-207ENST00000528339 CRYBA4P53673 196 aa5.45□□□□□ -1.54
SORL1-207ENST00000528339 MUC21Q5SSG8 566 aa5.45□□□□□ -1.54
SORL1-207ENST00000528339 AMN1Q8IY45 258 aa5.45□□□□□ -1.54
SORL1-207ENST00000528339 NEXN-AS1Q8NBZ9 246 aa5.45□□□□□ -1.54
SORL1-207ENST00000528339 TSHBP01222 138 aa5.45□□□□□ -1.54
SORL1-207ENST00000528339 ORM1P02763 201 aa5.45□□□□□ -1.54
SORL1-207ENST00000528339 RPL35AP18077 110 aaKnown RBP5.45□□□□□ -1.54
SORL1-207ENST00000528339 SPATA25Q9BR10 227 aa5.45□□□□□ -1.54
SORL1-207ENST00000528339 RHODO00212 210 aa5.45□□□□□ -1.54
SORL1-207ENST00000528339 P0DMU3 169 aa5.45□□□□□ -1.54
SORL1-207ENST00000528339 FAM231AP0DMU4 169 aa5.45□□□□□ -1.54
SORL1-207ENST00000528339 FAM231CP0DMU5 169 aa5.45□□□□□ -1.54
SORL1-207ENST00000528339 TIMM8BQ9Y5J9 83 aaPredicted RBP5.45□□□□□ -1.54
SORL1-207ENST00000528339 DAZAP1Q96EP5 407 aaKnown RBP5.44□□□□□ -1.54
SORL1-207ENST00000528339 AP1S3Q96PC3 154 aa5.44□□□□□ -1.54
SORL1-207ENST00000528339 CHCHD7Q9BUK0 85 aa5.44□□□□□ -1.54
SORL1-207ENST00000528339 NPYP01303 97 aa5.44□□□□□ -1.54
SORL1-207ENST00000528339 S100A8P05109 93 aa5.44□□□□□ -1.54
SORL1-207ENST00000528339 C14orf178Q8N769 122 aaPredicted RBP5.44□□□□□ -1.54
SORL1-207ENST00000528339 ZNF479Q96JC4 524 aa5.44□□□□□ -1.54
SORL1-207ENST00000528339 IGKV3-20P01619 116 aa5.44□□□□□ -1.54
SORL1-207ENST00000528339 DEFB135Q30KP9 77 aa5.44□□□□□ -1.54
SORL1-207ENST00000528339 NTM-AS1Q6ZSK4 140 aa5.44□□□□□ -1.54
SORL1-207ENST00000528339 HIST3H2BBQ8N257 126 aa5.44□□□□□ -1.54
SORL1-207ENST00000528339 OR11H2Q8NH07 326 aa5.44□□□□□ -1.54
SORL1-207ENST00000528339 RETNQ9HD89 108 aa5.44□□□□□ -1.54
SORL1-207ENST00000528339 S100PP25815 95 aa5.43□□□□□ -1.54
SORL1-207ENST00000528339 CHCHD1Q96BP2 118 aaKnown RBP5.43□□□□□ -1.54
SORL1-207ENST00000528339 ZMAT4Q9H898 229 aa5.43□□□□□ -1.54
SORL1-207ENST00000528339 SORL1Q92673 2214 aa5.43□□□□□ -1.54
SORL1-207ENST00000528339 NIT1Q86X76 327 aa5.43□□□□□ -1.54
SORL1-207ENST00000528339 Q8N8P6 123 aa5.43□□□□□ -1.54
SORL1-207ENST00000528339 SNURFLB1AK76 121 aa5.43□□□□□ -1.54
SORL1-207ENST00000528339 NCR2O95944 276 aa5.43□□□□□ -1.54
SORL1-207ENST00000528339 APCSP02743 223 aa5.43□□□□□ -1.54
SORL1-207ENST00000528339 ZNF876PQ49A33 203 aa5.43□□□□□ -1.54
SORL1-207ENST00000528339 SPATA12Q7Z6I5 190 aa5.43□□□□□ -1.54
SORL1-207ENST00000528339 MRPL52Q86TS9 123 aaKnown RBP5.43□□□□□ -1.54
SORL1-207ENST00000528339 LINC01587Q99440 93 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms