RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 DERL1Q9BUN8 251 aa10.52□□□□□ -0.73
CAPN1-213ENST00000527897 KRTAP17-1Q9BYP8 105 aa10.52□□□□□ -0.73
CAPN1-213ENST00000527897 GTSF1LQ9H1H1 148 aa10.52□□□□□ -0.73
CAPN1-213ENST00000527897 RYR1P21817 5038 aa10.52□□□□□ -0.73
CAPN1-213ENST00000527897 FUSP35637 526 aaKnown RBP eCLIP10.51□□□□□ -0.73
CAPN1-213ENST00000527897 LELP1Q5T871 98 aa10.51□□□□□ -0.73
CAPN1-213ENST00000527897 UFSP1Q6NVU6 142 aa10.51□□□□□ -0.73
CAPN1-213ENST00000527897 AKAP14Q86UN6 197 aa10.51□□□□□ -0.73
CAPN1-213ENST00000527897 SLC51BQ86UW2 128 aa10.51□□□□□ -0.73
CAPN1-213ENST00000527897 C10orf126Q8N4M7 172 aa10.51□□□□□ -0.73
CAPN1-213ENST00000527897 Q9UF83 564 aa10.51□□□□□ -0.73
CAPN1-213ENST00000527897 LRP1BQ9NZR2 4599 aa10.51□□□□□ -0.73
CAPN1-213ENST00000527897 TRAV1-1A0A0B4J248 108 aa10.5□□□□□ -0.73
CAPN1-213ENST00000527897 MUC21A0A0G2JKD1 596 aa10.5□□□□□ -0.73
CAPN1-213ENST00000527897 MUC21A0A140T8X8 626 aa10.5□□□□□ -0.73
CAPN1-213ENST00000527897 K7EP13 123 aa10.5□□□□□ -0.73
CAPN1-213ENST00000527897 SFRP2Q96HF1 295 aa10.5□□□□□ -0.73
CAPN1-213ENST00000527897 MLST8Q9BVC4 326 aa10.5□□□□□ -0.73
CAPN1-213ENST00000527897 Q9HAA7 133 aa10.5□□□□□ -0.73
CAPN1-213ENST00000527897 SCRT2Q9NQ03 307 aa10.5□□□□□ -0.73
CAPN1-213ENST00000527897 IFNA1P01562 189 aa10.49□□□□□ -0.73
CAPN1-213ENST00000527897 LINC01556Q5JQF7 62 aa10.49□□□□□ -0.73
CAPN1-213ENST00000527897 PCLOQ9Y6V0 5065 aa10.49□□□□□ -0.73
CAPN1-213ENST00000527897 PSCAO43653 123 aa10.48□□□□□ -0.73
CAPN1-213ENST00000527897 CENPWQ5EE01 88 aa10.48□□□□□ -0.73
CAPN1-213ENST00000527897 SPANXN1Q5VSR9 72 aa10.48□□□□□ -0.73
CAPN1-213ENST00000527897 OR10AG1Q8NH19 301 aa10.48□□□□□ -0.73
CAPN1-213ENST00000527897 C11orf52Q96A22 123 aa10.48□□□□□ -0.73
CAPN1-213ENST00000527897 RAB19A4D1S5 217 aa10.47□□□□□ -0.73
CAPN1-213ENST00000527897 MEF2BQ02080 365 aaPredicted RBP10.47□□□□□ -0.73
CAPN1-213ENST00000527897 ZNF56Q15929 161 aa10.47□□□□□ -0.73
CAPN1-213ENST00000527897 Q8N3U1 123 aa10.47□□□□□ -0.73
CAPN1-213ENST00000527897 DAZAP1Q96EP5 407 aaKnown RBP10.47□□□□□ -0.73
CAPN1-213ENST00000527897 TPPP3Q9BW30 176 aa10.47□□□□□ -0.73
CAPN1-213ENST00000527897 DNAH5Q8TE73 4624 aa10.47□□□□□ -0.73
CAPN1-213ENST00000527897 HSPG2P98160 4391 aa10.46□□□□□ -0.73
CAPN1-213ENST00000527897 A0A087WTM6 91 aa10.46□□□□□ -0.73
CAPN1-213ENST00000527897 LINC00694P0DN24 101 aa10.46□□□□□ -0.73
CAPN1-213ENST00000527897 GNG4P50150 75 aa10.46□□□□□ -0.73
CAPN1-213ENST00000527897 MED9Q9NWA0 146 aa10.46□□□□□ -0.73
CAPN1-213ENST00000527897 BOLA1Q9Y3E2 137 aa10.46□□□□□ -0.73
CAPN1-213ENST00000527897 IBA57-AS1B1ANH7 110 aa10.45□□□□□ -0.74
CAPN1-213ENST00000527897 PDE6DO43924 150 aa10.45□□□□□ -0.74
CAPN1-213ENST00000527897 CXCL1P09341 107 aa10.45□□□□□ -0.74
CAPN1-213ENST00000527897 GZMBP10144 247 aa10.45□□□□□ -0.74
CAPN1-213ENST00000527897 BCL2P10415 239 aa10.45□□□□□ -0.74
CAPN1-213ENST00000527897 C9orf62Q8N4C0 152 aa10.45□□□□□ -0.74
CAPN1-213ENST00000527897 F5H697 171 aa10.44□□□□□ -0.74
CAPN1-213ENST00000527897 CDK2AP2O75956 126 aa10.44□□□□□ -0.74
CAPN1-213ENST00000527897 RPL36AP83881 106 aaKnown RBP10.44□□□□□ -0.74
CAPN1-213ENST00000527897 ALKAL2Q6UX46 152 aa10.44□□□□□ -0.74
CAPN1-213ENST00000527897 OR2D3Q8NGH3 330 aa10.44□□□□□ -0.74
CAPN1-213ENST00000527897 RPL36ALQ969Q0 106 aaKnown RBP10.44□□□□□ -0.74
CAPN1-213ENST00000527897 PGPEP1Q9NXJ5 209 aa10.44□□□□□ -0.74
CAPN1-213ENST00000527897 VAX2Q9UIW0 290 aa10.44□□□□□ -0.74
CAPN1-213ENST00000527897 A0A087WWC5 75 aa10.43□□□□□ -0.74
CAPN1-213ENST00000527897 SNAI2O43623 268 aa10.43□□□□□ -0.74
CAPN1-213ENST00000527897 IGLV2-8P01709 118 aa10.43□□□□□ -0.74
CAPN1-213ENST00000527897 OR5AL1P0C617 328 aa10.43□□□□□ -0.74
CAPN1-213ENST00000527897 SMIM17P0DL12 118 aa10.43□□□□□ -0.74
CAPN1-213ENST00000527897 URGCP-MRPS24S4R325 110 aa10.43□□□□□ -0.74
CAPN1-213ENST00000527897 APOBP04114 4563 aaKnown RBP10.43□□□□□ -0.74
CAPN1-213ENST00000527897 TRBV10-1A0A0K0K1A3 114 aa10.42□□□□□ -0.74
CAPN1-213ENST00000527897 RBFOX3A6NFN3 312 aa10.42□□□□□ -0.74
CAPN1-213ENST00000527897 RAB4BP61018 213 aa10.42□□□□□ -0.74
CAPN1-213ENST00000527897 DAZ4Q86SG3 579 aaKnown RBP10.42□□□□□ -0.74
CAPN1-213ENST00000527897 MAPKAPK5-AS1Q8N8E1 139 aa10.42□□□□□ -0.74
CAPN1-213ENST00000527897 SSBP4Q9BWG4 385 aaPredicted RBP10.42□□□□□ -0.74
CAPN1-213ENST00000527897 DAZ3Q9NR90 486 aaKnown RBP10.42□□□□□ -0.74
CAPN1-213ENST00000527897 TRBV7-3A0A075B6L6 115 aa10.41□□□□□ -0.74
CAPN1-213ENST00000527897 P01737 135 aa10.41□□□□□ -0.74
CAPN1-213ENST00000527897 RPS20P60866 119 aaKnown RBP10.41□□□□□ -0.74
CAPN1-213ENST00000527897 FER1L6-AS1Q8NA97 138 aa10.41□□□□□ -0.74
CAPN1-213ENST00000527897 AP1S3Q96PC3 154 aa10.41□□□□□ -0.74
CAPN1-213ENST00000527897 TRBV20OR9-2A0A075B6H5 130 aa10.4□□□□□ -0.74
CAPN1-213ENST00000527897 MGPP08493 103 aa10.4□□□□□ -0.74
CAPN1-213ENST00000527897 NKX2-5P52952 324 aaPredicted RBP10.4□□□□□ -0.74
CAPN1-213ENST00000527897 XKRY2A2RUG3 117 aa10.39□□□□□ -0.75
CAPN1-213ENST00000527897 C19orf71A6NCJ1 209 aa10.39□□□□□ -0.75
CAPN1-213ENST00000527897 TAGLN2P37802 199 aaKnown RBP10.39□□□□□ -0.75
CAPN1-213ENST00000527897 UBE2D3P61077 147 aa10.39□□□□□ -0.75
CAPN1-213ENST00000527897 UBE2D2P62837 147 aa10.39□□□□□ -0.75
CAPN1-213ENST00000527897 LAGE3Q14657 143 aa10.39□□□□□ -0.75
CAPN1-213ENST00000527897 CDPF1Q6NVV7 123 aa10.39□□□□□ -0.75
CAPN1-213ENST00000527897 KCNIP4Q6PIL6 250 aa10.39□□□□□ -0.75
CAPN1-213ENST00000527897 NEXN-AS1Q8NBZ9 246 aa10.39□□□□□ -0.75
CAPN1-213ENST00000527897 SMIM12Q96EX1 92 aa10.39□□□□□ -0.75
CAPN1-213ENST00000527897 BIN3Q9NQY0 253 aa10.39□□□□□ -0.75
CAPN1-213ENST00000527897 A0A087WX48 190 aa10.38□□□□□ -0.75
CAPN1-213ENST00000527897 CEBPGP53567 150 aa10.38□□□□□ -0.75
CAPN1-213ENST00000527897 BLOC1S1P78537 153 aa10.38□□□□□ -0.75
CAPN1-213ENST00000527897 NIT1Q86X76 327 aa10.38□□□□□ -0.75
CAPN1-213ENST00000527897 TM2D2Q9BX73 214 aa10.38□□□□□ -0.75
CAPN1-213ENST00000527897 KRTAP4-5Q9BYR2 181 aa10.38□□□□□ -0.75
CAPN1-213ENST00000527897 ABCA13Q86UQ4 5058 aa10.38□□□□□ -0.75
CAPN1-213ENST00000527897 TRAV8-3A0A0A6YYJ7 113 aa10.37□□□□□ -0.75
CAPN1-213ENST00000527897 A0A1B0GVG6 124 aa10.37□□□□□ -0.75
CAPN1-213ENST00000527897 LRCOL1A6NCL2 159 aa10.37□□□□□ -0.75
CAPN1-213ENST00000527897 TMEM262E9PQX1 116 aa10.37□□□□□ -0.75
CAPN1-213ENST00000527897 IGLC6P0CF74 106 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms