RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 TRAV26-2A0A0B4J265 109 aa5.71□□□□□ -1.5
SOX6-208ENST00000527619 ATOX1O00244 68 aa5.71□□□□□ -1.5
SOX6-208ENST00000527619 CD59P13987 128 aa5.71□□□□□ -1.5
SOX6-208ENST00000527619 TNP2Q05952 138 aa5.71□□□□□ -1.5
SOX6-208ENST00000527619 ERCC8Q13216 396 aa5.71□□□□□ -1.5
SOX6-208ENST00000527619 LINC01600Q96MT4 127 aa5.71□□□□□ -1.5
SOX6-208ENST00000527619 INTS1Q8N201 2190 aaKnown RBP5.71□□□□□ -1.5
SOX6-208ENST00000527619 TRAV12-2A0A075B6T6 113 aa5.71□□□□□ -1.5
SOX6-208ENST00000527619 PLXNB1O43157 2135 aa5.71□□□□□ -1.5
SOX6-208ENST00000527619 P0DMU3 169 aa5.71□□□□□ -1.5
SOX6-208ENST00000527619 FAM231AP0DMU4 169 aa5.71□□□□□ -1.5
SOX6-208ENST00000527619 FAM231CP0DMU5 169 aa5.71□□□□□ -1.5
SOX6-208ENST00000527619 KLHL30-AS1Q8NEE0 82 aa5.71□□□□□ -1.5
SOX6-208ENST00000527619 SMIM2Q9BVW6 85 aa5.71□□□□□ -1.5
SOX6-208ENST00000527619 KLK15Q9H2R5 256 aa5.71□□□□□ -1.5
SOX6-208ENST00000527619 FREM2Q5SZK8 3169 aa5.7□□□□□ -1.5
SOX6-208ENST00000527619 USP17L23D6RBM5 183 aa5.7□□□□□ -1.5
SOX6-208ENST00000527619 ATXN8Q156A1 80 aa5.7□□□□□ -1.5
SOX6-208ENST00000527619 A0A0A0MQY5 61 aa5.7□□□□□ -1.5
SOX6-208ENST00000527619 IGHV3-72A0A0B4J1Y9 119 aa5.7□□□□□ -1.5
SOX6-208ENST00000527619 H3BMM0 161 aa5.7□□□□□ -1.5
SOX6-208ENST00000527619 NPC2P61916 151 aa5.7□□□□□ -1.5
SOX6-208ENST00000527619 DEFB124Q8NES8 71 aa5.7□□□□□ -1.5
SOX6-208ENST00000527619 UBE2WQ96B02 151 aa5.7□□□□□ -1.5
SOX6-208ENST00000527619 C16orf95Q9H693 158 aa5.7□□□□□ -1.5
SOX6-208ENST00000527619 X6R8D5 127 aa5.7□□□□□ -1.5
SOX6-208ENST00000527619 TEX49A0A1B0GTD5 131 aa5.69□□□□□ -1.5
SOX6-208ENST00000527619 K7EIM0 57 aa5.69□□□□□ -1.5
SOX6-208ENST00000527619 VPREB1P12018 145 aa5.69□□□□□ -1.5
SOX6-208ENST00000527619 Q6ZS46 218 aa5.69□□□□□ -1.5
SOX6-208ENST00000527619 SLC25A29Q8N8R3 303 aa5.69□□□□□ -1.5
SOX6-208ENST00000527619 TRAV41A0A0B4J266 112 aa5.69□□□□□ -1.5
SOX6-208ENST00000527619 TRBV10-2A0A0K0K1G8 114 aa5.69□□□□□ -1.5
SOX6-208ENST00000527619 IGHV3-33P01772 117 aa5.69□□□□□ -1.5
SOX6-208ENST00000527619 MRPL55Q7Z7F7 128 aaKnown RBP5.69□□□□□ -1.5
SOX6-208ENST00000527619 C1orf158Q8N1D5 194 aa5.69□□□□□ -1.5
SOX6-208ENST00000527619 H3BT86 120 aa5.68□□□□□ -1.5
SOX6-208ENST00000527619 VCYO14598 125 aa5.68□□□□□ -1.5
SOX6-208ENST00000527619 DLX1P56177 255 aa5.68□□□□□ -1.5
SOX6-208ENST00000527619 Q9UF83 564 aa5.68□□□□□ -1.5
SOX6-208ENST00000527619 IGKV3D-20A0A0C4DH25 116 aa5.68□□□□□ -1.5
SOX6-208ENST00000527619 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.68□□□□□ -1.5
SOX6-208ENST00000527619 EPM2AB3EWF7 344 aa5.68□□□□□ -1.5
SOX6-208ENST00000527619 PAPPA-AS1Q5QFB9 102 aa5.68□□□□□ -1.5
SOX6-208ENST00000527619 TMEM263Q8WUH6 116 aaKnown RBP5.68□□□□□ -1.5
SOX6-208ENST00000527619 SLC50A1Q9BRV3 221 aa5.68□□□□□ -1.5
SOX6-208ENST00000527619 SERP1Q9Y6X1 66 aa5.68□□□□□ -1.5
SOX6-208ENST00000527619 IGLV3-9A0A075B6K5 115 aa5.67□□□□□ -1.5
SOX6-208ENST00000527619 SMIM26A0A096LP01 95 aa5.67□□□□□ -1.5
SOX6-208ENST00000527619 A0A0B4J2C4 111 aa5.67□□□□□ -1.5
SOX6-208ENST00000527619 NDUFC2-KCTD14E9PQ53 114 aa5.67□□□□□ -1.5
SOX6-208ENST00000527619 IGHV1-46P01743 117 aa5.67□□□□□ -1.5
SOX6-208ENST00000527619 C2orf66Q6UXQ4 117 aa5.67□□□□□ -1.5
SOX6-208ENST00000527619 SLC25A15Q9Y619 301 aa5.67□□□□□ -1.5
SOX6-208ENST00000527619 IGHV4-4A0A075B6R2 117 aa5.67□□□□□ -1.5
SOX6-208ENST00000527619 IGHV7-4-1A0A0J9YVY3 117 aa5.67□□□□□ -1.5
SOX6-208ENST00000527619 M0R1B8 84 aa5.67□□□□□ -1.5
SOX6-208ENST00000527619 IGHV4-39P01824 125 aa5.67□□□□□ -1.5
SOX6-208ENST00000527619 CXCL5P42830 114 aa5.67□□□□□ -1.5
SOX6-208ENST00000527619 SUMO2P61956 95 aaKnown RBP5.67□□□□□ -1.5
SOX6-208ENST00000527619 TMEM170BQ5T4T1 132 aa5.67□□□□□ -1.5
SOX6-208ENST00000527619 RNF182Q8N6D2 247 aa5.67□□□□□ -1.5
SOX6-208ENST00000527619 C11orf86A6NJI1 115 aa5.66□□□□□ -1.5
SOX6-208ENST00000527619 H7C2G1 150 aa5.66□□□□□ -1.5
SOX6-208ENST00000527619 HILS1P60008 231 aa5.66□□□□□ -1.5
SOX6-208ENST00000527619 CCL8P80075 99 aa5.66□□□□□ -1.5
SOX6-208ENST00000527619 SPANXN1Q5VSR9 72 aa5.66□□□□□ -1.5
SOX6-208ENST00000527619 IGFL4Q6B9Z1 124 aa5.66□□□□□ -1.5
SOX6-208ENST00000527619 DYNAPQ8N1N2 210 aa5.66□□□□□ -1.5
SOX6-208ENST00000527619 UPK3BQ9BT76 320 aa5.66□□□□□ -1.5
SOX6-208ENST00000527619 DCHS1Q96JQ0 3298 aa5.66□□□□□ -1.5
SOX6-208ENST00000527619 IGLV4-69A0A075B6H9 119 aa5.66□□□□□ -1.5
SOX6-208ENST00000527619 EIF4EBP3O60516 100 aaPredicted RBP5.66□□□□□ -1.5
SOX6-208ENST00000527619 TSPEAR-AS2P59090 65 aa5.66□□□□□ -1.5
SOX6-208ENST00000527619 Q1RN00 199 aa5.66□□□□□ -1.5
SOX6-208ENST00000527619 C9orf106Q8NAJ2 232 aa5.66□□□□□ -1.5
SOX6-208ENST00000527619 C11orf21Q9P2W6 132 aa5.66□□□□□ -1.5
SOX6-208ENST00000527619 RNF223E7ERA6 249 aa5.65□□□□□ -1.5
SOX6-208ENST00000527619 IGF1P05019 195 aa5.65□□□□□ -1.5
SOX6-208ENST00000527619 C2orf82Q6UX34 121 aa5.65□□□□□ -1.5
SOX6-208ENST00000527619 GFRALQ6UXV0 394 aa5.65□□□□□ -1.5
SOX6-208ENST00000527619 SMAD5-AS1Q9Y6J3 95 aa5.65□□□□□ -1.5
SOX6-208ENST00000527619 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.65□□□□□ -1.51
SOX6-208ENST00000527619 LINC00643Q86TS7 51 aa5.65□□□□□ -1.51
SOX6-208ENST00000527619 SERP2Q8N6R1 65 aa5.65□□□□□ -1.51
SOX6-208ENST00000527619 AMELXQ99217 191 aa5.65□□□□□ -1.51
SOX6-208ENST00000527619 TRBV30A0A0K0K1B3 111 aa5.64□□□□□ -1.51
SOX6-208ENST00000527619 PRAC2D3DTV9 90 aa5.64□□□□□ -1.51
SOX6-208ENST00000527619 CCL21O00585 134 aa5.64□□□□□ -1.51
SOX6-208ENST00000527619 ACYP1P07311 99 aa5.64□□□□□ -1.51
SOX6-208ENST00000527619 LGALS3P17931 250 aaKnown RBP5.64□□□□□ -1.51
SOX6-208ENST00000527619 S4R3C0 116 aa5.64□□□□□ -1.51
SOX6-208ENST00000527619 U3KQE9 123 aa5.64□□□□□ -1.51
SOX6-208ENST00000527619 IGHV1-3A0A0C4DH29 117 aa5.64□□□□□ -1.51
SOX6-208ENST00000527619 NDUFB3O43676 98 aa5.64□□□□□ -1.51
SOX6-208ENST00000527619 IGHV1-8P0DP01 117 aa5.64□□□□□ -1.51
SOX6-208ENST00000527619 UBE2E1P51965 193 aa5.64□□□□□ -1.51
SOX6-208ENST00000527619 NSUN5P1Q3KNT7 163 aa5.64□□□□□ -1.51
SOX6-208ENST00000527619 DEFB121Q5J5C9 76 aa5.64□□□□□ -1.51
SOX6-208ENST00000527619 C5orf38Q86SI9 138 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms