RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 BAGE2Q86Y30 109 aa12.5□□□□□ -0.41
CAPN1-203ENST00000525013 KRTAP4-5Q9BYR2 181 aa12.5□□□□□ -0.41
CAPN1-203ENST00000525013 Q9HAA7 133 aa12.5□□□□□ -0.41
CAPN1-203ENST00000525013 Q9UF83 564 aa12.5□□□□□ -0.41
CAPN1-203ENST00000525013 IBA57-AS1B1ANH7 110 aa12.49□□□□□ -0.41
CAPN1-203ENST00000525013 PSCAO43653 123 aa12.49□□□□□ -0.41
CAPN1-203ENST00000525013 ZFP82Q8N141 532 aa12.49□□□□□ -0.41
CAPN1-203ENST00000525013 SFRP2Q96HF1 295 aa12.49□□□□□ -0.41
CAPN1-203ENST00000525013 SCRT2Q9NQ03 307 aa12.49□□□□□ -0.41
CAPN1-203ENST00000525013 GNG13Q9P2W3 67 aa12.48□□□□□ -0.41
CAPN1-203ENST00000525013 CCL20P78556 96 aa12.47□□□□□ -0.41
CAPN1-203ENST00000525013 RPL19P84098 196 aaKnown RBP12.47□□□□□ -0.41
CAPN1-203ENST00000525013 EIF5AL1Q6IS14 154 aaKnown RBP12.47□□□□□ -0.41
CAPN1-203ENST00000525013 PRR27Q6MZM9 219 aa12.47□□□□□ -0.41
CAPN1-203ENST00000525013 CDPF1Q6NVV7 123 aa12.47□□□□□ -0.41
CAPN1-203ENST00000525013 DNAH5Q8TE73 4624 aa12.46□□□□□ -0.41
CAPN1-203ENST00000525013 LINC00694P0DN24 101 aa12.46□□□□□ -0.41
CAPN1-203ENST00000525013 MLST8Q9BVC4 326 aa12.46□□□□□ -0.41
CAPN1-203ENST00000525013 MANBALQ9NQG1 85 aa12.46□□□□□ -0.41
CAPN1-203ENST00000525013 A0A087WWC5 75 aa12.45□□□□□ -0.42
CAPN1-203ENST00000525013 TEX46H3BTG2 121 aa12.45□□□□□ -0.42
CAPN1-203ENST00000525013 RPL35P42766 123 aaKnown RBP12.45□□□□□ -0.42
CAPN1-203ENST00000525013 RAB5CP51148 216 aa12.45□□□□□ -0.42
CAPN1-203ENST00000525013 Q8N3U1 123 aa12.45□□□□□ -0.42
CAPN1-203ENST00000525013 APOBP04114 4563 aaKnown RBP12.45□□□□□ -0.42
CAPN1-203ENST00000525013 TRAV1-1A0A0B4J248 108 aa12.44□□□□□ -0.42
CAPN1-203ENST00000525013 ABCA13Q86UQ4 5058 aa12.44□□□□□ -0.42
CAPN1-203ENST00000525013 TCTE3Q8IZS6 198 aa12.43□□□□□ -0.42
CAPN1-203ENST00000525013 OR10AG1Q8NH19 301 aa12.43□□□□□ -0.42
CAPN1-203ENST00000525013 DERL1Q9BUN8 251 aa12.43□□□□□ -0.42
CAPN1-203ENST00000525013 MUC21A0A0G2JKD1 596 aa12.42□□□□□ -0.42
CAPN1-203ENST00000525013 MUC21A0A140T8X8 626 aa12.42□□□□□ -0.42
CAPN1-203ENST00000525013 SULT1A2P50226 295 aa12.42□□□□□ -0.42
CAPN1-203ENST00000525013 SSTP61278 116 aa12.42□□□□□ -0.42
CAPN1-203ENST00000525013 Q8N1X5 172 aa12.42□□□□□ -0.42
CAPN1-203ENST00000525013 TRBV10-1A0A0K0K1A3 114 aa12.41□□□□□ -0.42
CAPN1-203ENST00000525013 CXCL1P09341 107 aa12.41□□□□□ -0.42
CAPN1-203ENST00000525013 RPL36AP83881 106 aaKnown RBP12.41□□□□□ -0.42
CAPN1-203ENST00000525013 LAGE3Q14657 143 aa12.41□□□□□ -0.42
CAPN1-203ENST00000525013 SPANXN1Q5VSR9 72 aa12.41□□□□□ -0.42
CAPN1-203ENST00000525013 DAZ4Q86SG3 579 aaKnown RBP12.41□□□□□ -0.42
CAPN1-203ENST00000525013 RPL36ALQ969Q0 106 aaKnown RBP12.41□□□□□ -0.42
CAPN1-203ENST00000525013 C11orf52Q96A22 123 aa12.41□□□□□ -0.42
CAPN1-203ENST00000525013 TM2D2Q9BX73 214 aa12.41□□□□□ -0.42
CAPN1-203ENST00000525013 DAZ3Q9NR90 486 aaKnown RBP12.41□□□□□ -0.42
CAPN1-203ENST00000525013 URGCP-MRPS24S4R325 110 aa12.41□□□□□ -0.42
CAPN1-203ENST00000525013 LRCOL1A6NCL2 159 aa12.4□□□□□ -0.42
CAPN1-203ENST00000525013 KRTAP10-1P60331 282 aa12.4□□□□□ -0.42
CAPN1-203ENST00000525013 ZNF56Q15929 161 aa12.4□□□□□ -0.42
CAPN1-203ENST00000525013 CENPWQ5EE01 88 aa12.4□□□□□ -0.42
CAPN1-203ENST00000525013 SNAI2O43623 268 aa12.39□□□□□ -0.43
CAPN1-203ENST00000525013 C1QBP02746 253 aa12.39□□□□□ -0.43
CAPN1-203ENST00000525013 OR5AL1P0C617 328 aa12.39□□□□□ -0.43
CAPN1-203ENST00000525013 GCSHP23434 173 aa12.39□□□□□ -0.43
CAPN1-203ENST00000525013 RAB4BP61018 213 aa12.39□□□□□ -0.43
CAPN1-203ENST00000525013 SLC51BQ86UW2 128 aa12.39□□□□□ -0.43
CAPN1-203ENST00000525013 SSBP4Q9BWG4 385 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-203ENST00000525013 TRBV7-3A0A075B6L6 115 aa12.38□□□□□ -0.43
CAPN1-203ENST00000525013 IGLV5-52A0A0A0MRZ9 124 aa12.38□□□□□ -0.43
CAPN1-203ENST00000525013 TRAV8-3A0A0A6YYJ7 113 aa12.38□□□□□ -0.43
CAPN1-203ENST00000525013 RAB19A4D1S5 217 aa12.38□□□□□ -0.43
CAPN1-203ENST00000525013 F5H697 171 aa12.38□□□□□ -0.43
CAPN1-203ENST00000525013 IFNA1P01562 189 aa12.38□□□□□ -0.43
CAPN1-203ENST00000525013 MEF2BQ02080 365 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-203ENST00000525013 TOR2AQ5JU69 321 aa12.38□□□□□ -0.43
CAPN1-203ENST00000525013 DAZAP1Q96EP5 407 aaKnown RBP12.38□□□□□ -0.43
CAPN1-203ENST00000525013 GNG4P50150 75 aa12.37□□□□□ -0.43
CAPN1-203ENST00000525013 UBE2D3P61077 147 aa12.37□□□□□ -0.43
CAPN1-203ENST00000525013 UBE2D2P62837 147 aa12.37□□□□□ -0.43
CAPN1-203ENST00000525013 Q6ZNX1 250 aa12.37□□□□□ -0.43
CAPN1-203ENST00000525013 PDE6DO43924 150 aa12.36□□□□□ -0.43
CAPN1-203ENST00000525013 SMIM17P0DL12 118 aa12.36□□□□□ -0.43
CAPN1-203ENST00000525013 GZMBP10144 247 aa12.36□□□□□ -0.43
CAPN1-203ENST00000525013 NIT1Q86X76 327 aa12.36□□□□□ -0.43
CAPN1-203ENST00000525013 Q8N814 137 aa12.36□□□□□ -0.43
CAPN1-203ENST00000525013 OR2D3Q8NGH3 330 aa12.36□□□□□ -0.43
CAPN1-203ENST00000525013 NTN5Q8WTR8 489 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-203ENST00000525013 TPPP3Q9BW30 176 aa12.36□□□□□ -0.43
CAPN1-203ENST00000525013 MED9Q9NWA0 146 aa12.36□□□□□ -0.43
CAPN1-203ENST00000525013 A0A087WX48 190 aa12.35□□□□□ -0.43
CAPN1-203ENST00000525013 IGLV2-8P01709 118 aa12.35□□□□□ -0.43
CAPN1-203ENST00000525013 BCL2P10415 239 aa12.35□□□□□ -0.43
CAPN1-203ENST00000525013 KCNIP4Q6PIL6 250 aa12.35□□□□□ -0.43
CAPN1-203ENST00000525013 OR10G8Q8NGN5 311 aa12.35□□□□□ -0.43
CAPN1-203ENST00000525013 hCG_2014768A0A024R1R8 64 aa12.34□□□□□ -0.43
CAPN1-203ENST00000525013 XGP55808 180 aa12.34□□□□□ -0.43
CAPN1-203ENST00000525013 RPS20P60866 119 aaKnown RBP12.34□□□□□ -0.43
CAPN1-203ENST00000525013 AKAP14Q86UN6 197 aa12.34□□□□□ -0.43
CAPN1-203ENST00000525013 NEXN-AS1Q8NBZ9 246 aa12.34□□□□□ -0.43
CAPN1-203ENST00000525013 AP1S3Q96PC3 154 aa12.34□□□□□ -0.43
CAPN1-203ENST00000525013 KLK12Q9UKR0 248 aa12.34□□□□□ -0.43
CAPN1-203ENST00000525013 RBFOX3A6NFN3 312 aa12.33□□□□□ -0.44
CAPN1-203ENST00000525013 TMEM262E9PQX1 116 aa12.33□□□□□ -0.44
CAPN1-203ENST00000525013 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-203ENST00000525013 FER1L6-AS1Q8NA97 138 aa12.33□□□□□ -0.44
CAPN1-203ENST00000525013 VAX2Q9UIW0 290 aa12.33□□□□□ -0.44
CAPN1-203ENST00000525013 LECT2O14960 151 aa12.32□□□□□ -0.44
CAPN1-203ENST00000525013 P01737 135 aa12.32□□□□□ -0.44
CAPN1-203ENST00000525013 WFDC2Q14508 124 aa12.32□□□□□ -0.44
CAPN1-203ENST00000525013 RMI2Q96E14 147 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms