RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 IGHV1OR15-1A0A075B7D0 117 aa6.63□□□□□ -1.35
PKP3-202ENST00000524646 TEX48A0A1B0GUV7 120 aa6.63□□□□□ -1.35
PKP3-202ENST00000524646 NACAE9PAV3 2078 aa6.63□□□□□ -1.35
PKP3-202ENST00000524646 F5H697 171 aa6.63□□□□□ -1.35
PKP3-202ENST00000524646 ZNF56Q15929 161 aa6.63□□□□□ -1.35
PKP3-202ENST00000524646 FOXI2Q6ZQN5 318 aa6.63□□□□□ -1.35
PKP3-202ENST00000524646 TRPT1Q86TN4 253 aaKnown RBP6.63□□□□□ -1.35
PKP3-202ENST00000524646 RNF152Q8N8N0 203 aa6.63□□□□□ -1.35
PKP3-202ENST00000524646 PLEKHB2Q96CS7 222 aa6.63□□□□□ -1.35
PKP3-202ENST00000524646 JPT2Q9H910 190 aa6.63□□□□□ -1.35
PKP3-202ENST00000524646 SPANXB1Q9NS25 103 aaPredicted RBP6.63□□□□□ -1.35
PKP3-202ENST00000524646 ZNF256Q9Y2P7 627 aaPredicted RBP6.63□□□□□ -1.35
PKP3-202ENST00000524646 SPTAN1Q13813 2472 aaKnown RBP6.62□□□□□ -1.35
PKP3-202ENST00000524646 A0A096LNT2 108 aa6.62□□□□□ -1.35
PKP3-202ENST00000524646 F8W1H4 67 aa6.62□□□□□ -1.35
PKP3-202ENST00000524646 ELANEP08246 267 aa6.62□□□□□ -1.35
PKP3-202ENST00000524646 UBE2D1P51668 147 aa6.62□□□□□ -1.35
PKP3-202ENST00000524646 RPL39P62891 51 aaKnown RBP6.62□□□□□ -1.35
PKP3-202ENST00000524646 RPL24P83731 157 aaKnown RBP6.62□□□□□ -1.35
PKP3-202ENST00000524646 ZNF876PQ49A33 203 aa6.62□□□□□ -1.35
PKP3-202ENST00000524646 MORN3Q6PF18 240 aaPredicted RBP6.62□□□□□ -1.35
PKP3-202ENST00000524646 SCGB1D4Q6XE38 83 aa6.62□□□□□ -1.35
PKP3-202ENST00000524646 VPREB3Q9UKI3 123 aa6.62□□□□□ -1.35
PKP3-202ENST00000524646 A0A0J9YY99 117 aa6.61□□□□□ -1.35
PKP3-202ENST00000524646 M0QY20 66 aa6.61□□□□□ -1.35
PKP3-202ENST00000524646 FSHBP01225 129 aa6.61□□□□□ -1.35
PKP3-202ENST00000524646 TSPEAR-AS2P59090 65 aa6.61□□□□□ -1.35
PKP3-202ENST00000524646 SPINK13Q1W4C9 94 aa6.61□□□□□ -1.35
PKP3-202ENST00000524646 CD300EQ496F6 205 aaPredicted RBP6.61□□□□□ -1.35
PKP3-202ENST00000524646 FAM74A4Q5TZK3 123 aa6.61□□□□□ -1.35
PKP3-202ENST00000524646 LYRM7Q5U5X0 104 aa6.61□□□□□ -1.35
PKP3-202ENST00000524646 C10orf99Q6UWK7 81 aa6.61□□□□□ -1.35
PKP3-202ENST00000524646 NFE4Q86UQ8 179 aa6.61□□□□□ -1.35
PKP3-202ENST00000524646 Q8N1Y9 231 aa6.61□□□□□ -1.35
PKP3-202ENST00000524646 WFDC12Q8WWY7 111 aa6.61□□□□□ -1.35
PKP3-202ENST00000524646 ZNF702PQ9H963 129 aa6.61□□□□□ -1.35
PKP3-202ENST00000524646 EDA2RQ9HAV5 297 aa6.61□□□□□ -1.35
PKP3-202ENST00000524646 PGPEP1Q9NXJ5 209 aa6.61□□□□□ -1.35
PKP3-202ENST00000524646 PRO0461Q9UI25 63 aa6.61□□□□□ -1.35
PKP3-202ENST00000524646 TACC2O95359 2948 aa6.61□□□□□ -1.35
PKP3-202ENST00000524646 TRAV12-2A0A075B6T6 113 aa6.6□□□□□ -1.35
PKP3-202ENST00000524646 A8MTW9 85 aa6.6□□□□□ -1.35
PKP3-202ENST00000524646 J3QR89 54 aa6.6□□□□□ -1.35
PKP3-202ENST00000524646 IGKV3-20P01619 116 aa6.6□□□□□ -1.35
PKP3-202ENST00000524646 SYNJ2BPP57105 145 aa6.6□□□□□ -1.35
PKP3-202ENST00000524646 AMTNQ6UX39 209 aa6.6□□□□□ -1.35
PKP3-202ENST00000524646 MRPL16Q9NX20 251 aaKnown RBP6.6□□□□□ -1.35
PKP3-202ENST00000524646 MDFICQ9P1T7 246 aa6.6□□□□□ -1.35
PKP3-202ENST00000524646 SPTBN4Q9H254 2564 aa6.6□□□□□ -1.35
PKP3-202ENST00000524646 PRRC2AP48634 2157 aaKnown RBP6.59□□□□□ -1.35
PKP3-202ENST00000524646 HOXA3O43365 443 aaPredicted RBP6.59□□□□□ -1.35
PKP3-202ENST00000524646 TSPAN13O95857 204 aa6.59□□□□□ -1.35
PKP3-202ENST00000524646 LGALS3P17931 250 aaKnown RBP6.59□□□□□ -1.35
PKP3-202ENST00000524646 HOXD3P31249 432 aaPredicted RBP6.59□□□□□ -1.35
PKP3-202ENST00000524646 EMP1P54849 157 aa6.59□□□□□ -1.35
PKP3-202ENST00000524646 SRSF9Q13242 221 aaKnown RBP eCLIP6.59□□□□□ -1.35
PKP3-202ENST00000524646 GAGE13Q4V321 117 aa6.59□□□□□ -1.35
PKP3-202ENST00000524646 TMEM170BQ5T4T1 132 aa6.59□□□□□ -1.35
PKP3-202ENST00000524646 DLX4Q92988 240 aaPredicted RBP6.59□□□□□ -1.35
PKP3-202ENST00000524646 UBE2E2Q96LR5 201 aa6.59□□□□□ -1.35
PKP3-202ENST00000524646 AMELXQ99217 191 aa6.59□□□□□ -1.35
PKP3-202ENST00000524646 NCOR2Q9Y618 2525 aa6.59□□□□□ -1.35
PKP3-202ENST00000524646 DCHS1Q96JQ0 3298 aa6.59□□□□□ -1.35
PKP3-202ENST00000524646 DOPEY2Q9Y3R5 2298 aa6.59□□□□□ -1.36
PKP3-202ENST00000524646 DOPEY1Q5JWR5 2465 aa6.58□□□□□ -1.36
PKP3-202ENST00000524646 TRAV2A0A0B4J234 112 aa6.58□□□□□ -1.36
PKP3-202ENST00000524646 H3BMG7 143 aa6.58□□□□□ -1.36
PKP3-202ENST00000524646 I3L3M4 83 aa6.58□□□□□ -1.36
PKP3-202ENST00000524646 J3QQQ9 107 aa6.58□□□□□ -1.36
PKP3-202ENST00000524646 LEPROTO15243 131 aa6.58□□□□□ -1.36
PKP3-202ENST00000524646 UBE2D3P61077 147 aa6.58□□□□□ -1.36
PKP3-202ENST00000524646 UBE2D2P62837 147 aa6.58□□□□□ -1.36
PKP3-202ENST00000524646 WFDC2Q14508 124 aa6.58□□□□□ -1.36
PKP3-202ENST00000524646 Q5PR19 223 aa6.58□□□□□ -1.36
PKP3-202ENST00000524646 C20orf203Q8NBC4 194 aa6.58□□□□□ -1.36
PKP3-202ENST00000524646 ATP6V0E2Q8NHE4 81 aa6.58□□□□□ -1.36
PKP3-202ENST00000524646 ZNRF2Q8NHG8 242 aa6.58□□□□□ -1.36
PKP3-202ENST00000524646 IGLV4-3A0A075B6K6 122 aa6.57□□□□□ -1.36
PKP3-202ENST00000524646 TMEM223A0PJW6 202 aa6.57□□□□□ -1.36
PKP3-202ENST00000524646 IGHV3-30P01768 117 aa6.57□□□□□ -1.36
PKP3-202ENST00000524646 IGHV3-30-5P0DP03 117 aa6.57□□□□□ -1.36
PKP3-202ENST00000524646 ZNF22P17026 224 aaPredicted RBP6.57□□□□□ -1.36
PKP3-202ENST00000524646 ZNF415Q09FC8 603 aa6.57□□□□□ -1.36
PKP3-202ENST00000524646 Q6YL49 198 aa6.57□□□□□ -1.36
PKP3-202ENST00000524646 SLC25A29Q8N8R3 303 aa6.57□□□□□ -1.36
PKP3-202ENST00000524646 KLHL30-AS1Q8NEE0 82 aa6.57□□□□□ -1.36
PKP3-202ENST00000524646 NRGNQ92686 78 aa6.57□□□□□ -1.36
PKP3-202ENST00000524646 PKD1L2Q7Z442 2459 aa6.56□□□□□ -1.36
PKP3-202ENST00000524646 APOMO95445 188 aa6.56□□□□□ -1.36
PKP3-202ENST00000524646 RBMY1A1P0DJD3 496 aaKnown RBP6.56□□□□□ -1.36
PKP3-202ENST00000524646 RBMY1CP0DJD4 496 aa6.56□□□□□ -1.36
PKP3-202ENST00000524646 P0DMU3 169 aa6.56□□□□□ -1.36
PKP3-202ENST00000524646 FAM231AP0DMU4 169 aa6.56□□□□□ -1.36
PKP3-202ENST00000524646 FAM231CP0DMU5 169 aa6.56□□□□□ -1.36
PKP3-202ENST00000524646 SCGB1A1P11684 91 aa6.56□□□□□ -1.36
PKP3-202ENST00000524646 RBMY1FQ15415 496 aaKnown RBP6.56□□□□□ -1.36
PKP3-202ENST00000524646 PIK3CD-AS1Q5SR53 167 aa6.56□□□□□ -1.36
PKP3-202ENST00000524646 CFAP126Q5VTH2 177 aa6.56□□□□□ -1.36
PKP3-202ENST00000524646 NDUFA11Q86Y39 141 aa6.56□□□□□ -1.36
PKP3-202ENST00000524646 DEFB104AQ8WTQ1 72 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms