RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 ZNF479Q96JC4 524 aa8.75□□□□□ -1.01
VEGFA-225ENST00000523950 DNAH6Q9C0G6 4158 aa8.74□□□□□ -1.01
VEGFA-225ENST00000523950 PGPEP1LA6NFU8 196 aa8.74□□□□□ -1.01
VEGFA-225ENST00000523950 H3BVH4 76 aa8.74□□□□□ -1.01
VEGFA-225ENST00000523950 ARMS2P0C7Q2 107 aa8.74□□□□□ -1.01
VEGFA-225ENST00000523950 COA6Q5JTJ3 125 aaKnown RBP8.74□□□□□ -1.01
VEGFA-225ENST00000523950 PRR27Q6MZM9 219 aa8.74□□□□□ -1.01
VEGFA-225ENST00000523950 SCRT2Q9NQ03 307 aa8.74□□□□□ -1.01
VEGFA-225ENST00000523950 ICOSQ9Y6W8 199 aa8.74□□□□□ -1.01
VEGFA-225ENST00000523950 NACAE9PAV3 2078 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 A0A096LPF7 62 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 TGIF2-C20orf24A0A0A6YYL0 155 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 HIST1H2BKO60814 126 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 IGLV2-8P01709 118 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 HIST1H2BJP06899 126 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 MGST1P10620 155 aaKnown RBP8.73□□□□□ -1.01
VEGFA-225ENST00000523950 HIST1H2BOP23527 126 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 HIST1H2BBP33778 126 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 HIST1H2BDP58876 126 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 HIST1H2BCP62807 126 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 MRPL23Q16540 153 aaKnown RBP8.73□□□□□ -1.01
VEGFA-225ENST00000523950 HIST2H2BEQ16778 126 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.73□□□□□ -1.01
VEGFA-225ENST00000523950 CFAP126Q5VTH2 177 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 HIST1H2BHQ93079 126 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 DAZAP1Q96EP5 407 aaKnown RBP8.73□□□□□ -1.01
VEGFA-225ENST00000523950 HIST1H2BNQ99877 126 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 HIST1H2BMQ99879 126 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 PHLDA3Q9Y5J5 127 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 VPS13DQ5THJ4 4388 aa8.73□□□□□ -1.01
VEGFA-225ENST00000523950 KMT2AQ03164 3969 aa8.72□□□□□ -1.01
VEGFA-225ENST00000523950 TRBV20OR9-2A0A075B6H5 130 aa8.72□□□□□ -1.01
VEGFA-225ENST00000523950 TMSB15BA0A087X1C1 80 aa8.72□□□□□ -1.01
VEGFA-225ENST00000523950 GRIFINA4D1Z8 144 aa8.72□□□□□ -1.01
VEGFA-225ENST00000523950 C19orf71A6NCJ1 209 aa8.72□□□□□ -1.01
VEGFA-225ENST00000523950 GATA1P15976 413 aaPredicted RBP8.72□□□□□ -1.01
VEGFA-225ENST00000523950 RPS20P60866 119 aaKnown RBP8.72□□□□□ -1.01
VEGFA-225ENST00000523950 COX19Q49B96 90 aa8.72□□□□□ -1.01
VEGFA-225ENST00000523950 ZFP2Q6ZN57 461 aa8.72□□□□□ -1.01
VEGFA-225ENST00000523950 ZNF575Q86XF7 245 aa8.72□□□□□ -1.01
VEGFA-225ENST00000523950 TRBV6-4A0A1B0GX49 114 aa8.71□□□□□ -1.02
VEGFA-225ENST00000523950 RHODO00212 210 aa8.71□□□□□ -1.02
VEGFA-225ENST00000523950 TRGC2P03986 189 aa8.71□□□□□ -1.02
VEGFA-225ENST00000523950 NDUFA6P56556 154 aa8.71□□□□□ -1.02
VEGFA-225ENST00000523950 CTAG1AP78358 180 aa8.71□□□□□ -1.02
VEGFA-225ENST00000523950 SH2D6Q7Z4S9 175 aa8.71□□□□□ -1.02
VEGFA-225ENST00000523950 UPK3BQ9BT76 320 aa8.71□□□□□ -1.02
VEGFA-225ENST00000523950 LINC00588Q9Y4M8 146 aa8.71□□□□□ -1.02
VEGFA-225ENST00000523950 URGCP-MRPS24S4R325 110 aa8.71□□□□□ -1.02
VEGFA-225ENST00000523950 XKRY2A2RUG3 117 aa8.7□□□□□ -1.02
VEGFA-225ENST00000523950 PHOX2AO14813 284 aa8.7□□□□□ -1.02
VEGFA-225ENST00000523950 SNAI2O43623 268 aa8.7□□□□□ -1.02
VEGFA-225ENST00000523950 OR5AL1P0C617 328 aa8.7□□□□□ -1.02
VEGFA-225ENST00000523950 TRGC1P0CF51 173 aa8.7□□□□□ -1.02
VEGFA-225ENST00000523950 RHOHQ15669 191 aa8.7□□□□□ -1.02
VEGFA-225ENST00000523950 DMRTA1Q5VZB9 504 aa8.7□□□□□ -1.02
VEGFA-225ENST00000523950 LINC01551Q86U37 167 aa8.7□□□□□ -1.02
VEGFA-225ENST00000523950 PRADC1Q9BSG0 188 aa8.7□□□□□ -1.02
VEGFA-225ENST00000523950 SSBP4Q9BWG4 385 aaPredicted RBP8.7□□□□□ -1.02
VEGFA-225ENST00000523950 NIT2Q9NQR4 276 aa8.7□□□□□ -1.02
VEGFA-225ENST00000523950 MRPS16Q9Y3D3 137 aaKnown RBP8.7□□□□□ -1.02
VEGFA-225ENST00000523950 K7EQD1 137 aa8.69□□□□□ -1.02
VEGFA-225ENST00000523950 NXPH4O95158 308 aa8.69□□□□□ -1.02
VEGFA-225ENST00000523950 P01737 135 aa8.69□□□□□ -1.02
VEGFA-225ENST00000523950 GYPEP15421 78 aa8.69□□□□□ -1.02
VEGFA-225ENST00000523950 SRIP30626 198 aa8.69□□□□□ -1.02
VEGFA-225ENST00000523950 ESRGQ1W209 222 aa8.69□□□□□ -1.02
VEGFA-225ENST00000523950 NEGR1Q7Z3B1 354 aa8.69□□□□□ -1.02
VEGFA-225ENST00000523950 HIST3H2BBQ8N257 126 aa8.69□□□□□ -1.02
VEGFA-225ENST00000523950 ZNRF2Q8NHG8 242 aa8.69□□□□□ -1.02
VEGFA-225ENST00000523950 SFRP2Q96HF1 295 aa8.69□□□□□ -1.02
VEGFA-225ENST00000523950 PCP4L1A6NKN8 68 aa8.68□□□□□ -1.02
VEGFA-225ENST00000523950 M0R381 172 aa8.68□□□□□ -1.02
VEGFA-225ENST00000523950 SLC25A29Q8N8R3 303 aa8.68□□□□□ -1.02
VEGFA-225ENST00000523950 OR2D3Q8NGH3 330 aa8.68□□□□□ -1.02
VEGFA-225ENST00000523950 FRZBQ92765 325 aa8.68□□□□□ -1.02
VEGFA-225ENST00000523950 IGLC6P0CF74 106 aa8.67□□□□□ -1.02
VEGFA-225ENST00000523950 UFSP1Q6NVU6 142 aa8.67□□□□□ -1.02
VEGFA-225ENST00000523950 OCC1Q8TAD7 63 aa8.67□□□□□ -1.02
VEGFA-225ENST00000523950 IGHV3-73A0A0B4J1V6 119 aa8.66□□□□□ -1.02
VEGFA-225ENST00000523950 A0A1W2PPQ1 181 aa8.66□□□□□ -1.02
VEGFA-225ENST00000523950 F2Z2F3 143 aa8.66□□□□□ -1.02
VEGFA-225ENST00000523950 K7EN84 100 aa8.66□□□□□ -1.02
VEGFA-225ENST00000523950 TIRAPP58753 221 aa8.66□□□□□ -1.02
VEGFA-225ENST00000523950 CACNG7P62955 275 aa8.66□□□□□ -1.02
VEGFA-225ENST00000523950 SPANXN1Q5VSR9 72 aa8.66□□□□□ -1.02
VEGFA-225ENST00000523950 LYPD5Q6UWN5 251 aa8.66□□□□□ -1.02
VEGFA-225ENST00000523950 Q6ZR54 194 aa8.66□□□□□ -1.02
VEGFA-225ENST00000523950 FAM231DQ6ZW35 169 aa8.66□□□□□ -1.02
VEGFA-225ENST00000523950 FER1L6-AS1Q8NA97 138 aa8.66□□□□□ -1.02
VEGFA-225ENST00000523950 NUDT10Q8NFP7 164 aa8.66□□□□□ -1.02
VEGFA-225ENST00000523950 OR10G8Q8NGN5 311 aa8.66□□□□□ -1.02
VEGFA-225ENST00000523950 OR10AG1Q8NH19 301 aa8.66□□□□□ -1.02
VEGFA-225ENST00000523950 NUDT11Q96G61 164 aa8.66□□□□□ -1.02
VEGFA-225ENST00000523950 Q9H8V8 135 aa8.66□□□□□ -1.02
VEGFA-225ENST00000523950 IGLV2-18A0A075B6J9 118 aa8.65□□□□□ -1.02
VEGFA-225ENST00000523950 MT-ND6P03923 174 aa8.65□□□□□ -1.02
VEGFA-225ENST00000523950 CRYGDP07320 174 aa8.65□□□□□ -1.02
VEGFA-225ENST00000523950 TTC32Q5I0X7 151 aa8.65□□□□□ -1.02
VEGFA-225ENST00000523950 FAM74A4Q5TZK3 123 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms