RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 PHLDA3Q9Y5J5 127 aa3.85□□□□□ -1.79
NPM1-207ENST00000521260 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.85□□□□□ -1.79
NPM1-207ENST00000521260 EML6Q6ZMW3 1958 aa3.85□□□□□ -1.79
NPM1-207ENST00000521260 SHANK1Q9Y566 2161 aa3.85□□□□□ -1.79
NPM1-207ENST00000521260 IGHV1OR15-9A0A0B4J2B8 117 aa3.84□□□□□ -1.79
NPM1-207ENST00000521260 PDE6GP18545 87 aa3.84□□□□□ -1.79
NPM1-207ENST00000521260 CXCL6P80162 114 aa3.84□□□□□ -1.79
NPM1-207ENST00000521260 SERTAD4-AS1Q5TG53 156 aa3.84□□□□□ -1.79
NPM1-207ENST00000521260 HIST2H2BCQ6DN03 193 aa3.84□□□□□ -1.79
NPM1-207ENST00000521260 HIST2H2BDQ6DRA6 164 aa3.84□□□□□ -1.79
NPM1-207ENST00000521260 PHF5AQ7RTV0 110 aaKnown RBP3.84□□□□□ -1.79
NPM1-207ENST00000521260 MPLKIPQ8TAP9 179 aa3.84□□□□□ -1.79
NPM1-207ENST00000521260 C8orf49Q96NF6 230 aa3.84□□□□□ -1.79
NPM1-207ENST00000521260 AMELXQ99217 191 aa3.84□□□□□ -1.79
NPM1-207ENST00000521260 CCL13Q99616 98 aa3.84□□□□□ -1.79
NPM1-207ENST00000521260 KLK15Q9H2R5 256 aa3.84□□□□□ -1.79
NPM1-207ENST00000521260 MRPL36Q9P0J6 103 aaKnown RBP3.84□□□□□ -1.79
NPM1-207ENST00000521260 LENEPQ9Y5L5 61 aa3.84□□□□□ -1.79
NPM1-207ENST00000521260 CACNA1CQ13936 2221 aa3.84□□□□□ -1.79
NPM1-207ENST00000521260 MYOFQ9NZM1 2061 aa3.83□□□□□ -1.8
NPM1-207ENST00000521260 TRAV23DV6A0A075B6W5 121 aa3.83□□□□□ -1.8
NPM1-207ENST00000521260 IGHV3-43A0A0B4J1X8 118 aa3.83□□□□□ -1.8
NPM1-207ENST00000521260 SPRY2O43597 315 aa3.83□□□□□ -1.8
NPM1-207ENST00000521260 MRPL33O75394 65 aaKnown RBP3.83□□□□□ -1.8
NPM1-207ENST00000521260 SAA1P0DJI8 122 aaPredicted RBP3.83□□□□□ -1.8
NPM1-207ENST00000521260 IGHV3-43DP0DP04 118 aa3.83□□□□□ -1.8
NPM1-207ENST00000521260 FUSP35637 526 aaKnown RBP eCLIP3.83□□□□□ -1.85e-8■■■■□ 23.6
NPM1-207ENST00000521260 SS18Q15532 418 aa3.83□□□□□ -1.8
NPM1-207ENST00000521260 DEFB110Q30KQ9 67 aa3.83□□□□□ -1.8
NPM1-207ENST00000521260 ATP11AUNQ6ZP68 121 aa3.83□□□□□ -1.8
NPM1-207ENST00000521260 FGF23Q9GZV9 251 aaPredicted RBP3.83□□□□□ -1.8
NPM1-207ENST00000521260 COL4A5P29400 1685 aa3.82□□□□□ -1.8
NPM1-207ENST00000521260 IGHV4OR15-8A0A075B7B6 117 aa3.82□□□□□ -1.8
NPM1-207ENST00000521260 A0A087WW49 117 aa3.82□□□□□ -1.8
NPM1-207ENST00000521260 TRAV12-3A0A0B4J271 114 aa3.82□□□□□ -1.8
NPM1-207ENST00000521260 IGHV5-51A0A0C4DH38 117 aa3.82□□□□□ -1.8
NPM1-207ENST00000521260 DEFB108AA8MXU0 73 aa3.82□□□□□ -1.8
NPM1-207ENST00000521260 M0R378 163 aa3.82□□□□□ -1.8
NPM1-207ENST00000521260 TRBV12-3P01733 135 aa3.82□□□□□ -1.8
NPM1-207ENST00000521260 SAA2P0DJI9 122 aaPredicted RBP3.82□□□□□ -1.8
NPM1-207ENST00000521260 RPL28P46779 137 aaKnown RBP3.82□□□□□ -1.8
NPM1-207ENST00000521260 RPL39P5Q59GN2 51 aa3.82□□□□□ -1.8
NPM1-207ENST00000521260 LCA10Q71F78 164 aa3.82□□□□□ -1.8
NPM1-207ENST00000521260 C14orf178Q8N769 122 aaPredicted RBP3.82□□□□□ -1.8
NPM1-207ENST00000521260 DCTN5Q9BTE1 182 aa3.82□□□□□ -1.8
NPM1-207ENST00000521260 LINC00846Q9NV44 126 aa3.82□□□□□ -1.8
NPM1-207ENST00000521260 RNF186Q9NXI6 227 aa3.82□□□□□ -1.8
NPM1-207ENST00000521260 ORMDL1Q9P0S3 153 aa3.82□□□□□ -1.8
NPM1-207ENST00000521260 NDUFA12Q9UI09 145 aa3.82□□□□□ -1.8
NPM1-207ENST00000521260 A0A087WVE0 104 aa3.81□□□□□ -1.8
NPM1-207ENST00000521260 IGHV1-18A0A0C4DH31 117 aa3.81□□□□□ -1.8
NPM1-207ENST00000521260 TRBV6-5A0A0K0K1A5 114 aa3.81□□□□□ -1.8
NPM1-207ENST00000521260 E7EQL1 145 aa3.81□□□□□ -1.8
NPM1-207ENST00000521260 TMEM256-PLSCR3K7ERE1 68 aa3.81□□□□□ -1.8
NPM1-207ENST00000521260 ZNF73O43830 326 aaPredicted RBP3.81□□□□□ -1.8
NPM1-207ENST00000521260 PROP1O75360 226 aa3.81□□□□□ -1.8
NPM1-207ENST00000521260 IGHV3-30-3P0DP02 117 aa3.81□□□□□ -1.8
NPM1-207ENST00000521260 S100A4P26447 101 aaKnown RBP3.81□□□□□ -1.8
NPM1-207ENST00000521260 TSPEAR-AS2P59090 65 aa3.81□□□□□ -1.8
NPM1-207ENST00000521260 MLANAQ16655 118 aa3.81□□□□□ -1.8
NPM1-207ENST00000521260 Q8N2B8 174 aa3.81□□□□□ -1.8
NPM1-207ENST00000521260 Q8NA96 180 aa3.81□□□□□ -1.8
NPM1-207ENST00000521260 RPP25Q9BUL9 199 aaKnown RBP3.81□□□□□ -1.8
NPM1-207ENST00000521260 CYP4F30PQ9H0H9 118 aa3.81□□□□□ -1.8
NPM1-207ENST00000521260 LINC00474Q9P2X8 69 aa3.81□□□□□ -1.8
NPM1-207ENST00000521260 IGKV3D-15A0A087WSY6 115 aa3.8□□□□□ -1.8
NPM1-207ENST00000521260 NDUFA1O15239 70 aa3.8□□□□□ -1.8
NPM1-207ENST00000521260 CRPP02741 224 aa3.8□□□□□ -1.8
NPM1-207ENST00000521260 RPL27AP46776 148 aaKnown RBP3.8□□□□□ -1.8
NPM1-207ENST00000521260 ZNF833PQ6ZTB9 187 aa3.8□□□□□ -1.8
NPM1-207ENST00000521260 OPRPNQ99935 248 aaPredicted RBP3.8□□□□□ -1.8
NPM1-207ENST00000521260 DEFB126Q9BYW3 111 aa3.8□□□□□ -1.8
NPM1-207ENST00000521260 MSRB1Q9NZV6 116 aa3.8□□□□□ -1.8
NPM1-207ENST00000521260 CTSZQ9UBR2 303 aa3.8□□□□□ -1.8
NPM1-207ENST00000521260 TET1Q8NFU7 2136 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 HEATR1Q9H583 2144 aaKnown RBP3.79□□□□□ -1.8
NPM1-207ENST00000521260 TRAV21A0A0B4J279 112 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 PRYO14603 147 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 ZNHIT1O43257 154 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 PATE4P0C8F1 98 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 WT1-ASQ06250 92 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 PIK3CD-AS1Q5SR53 167 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 ENHOQ6UWT2 76 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 CXCL17Q6UXB2 119 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 C7orf65Q6ZTY9 151 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 C6orf223Q8N319 242 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 NKAPP1Q8N9T2 125 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 TMEM254Q8TBM7 123 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 LITAFQ99732 161 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 RNF5Q99942 180 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 LIMD2Q9BT23 127 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 LINC00574Q9H8X3 128 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 C14orf132Q9NPU4 83 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 LINC00588Q9Y4M8 146 aa3.79□□□□□ -1.8
NPM1-207ENST00000521260 GOLGA4Q13439 2230 aaKnown RBP3.79□□□□□ -1.8
NPM1-207ENST00000521260 IGLV3-12A0A075B6K2 115 aa3.78□□□□□ -1.8
NPM1-207ENST00000521260 IGHV3-15A0A0B4J1V0 119 aa3.78□□□□□ -1.8
NPM1-207ENST00000521260 IGHV5-10-1A0A0J9YXX1 117 aa3.78□□□□□ -1.8
NPM1-207ENST00000521260 C8orf87E5RJ46 101 aa3.78□□□□□ -1.8
NPM1-207ENST00000521260 E7EUB6 86 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms