RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 TMEM241Q24JQ0 296 aa8.22□□□□□ -1.09
HPS4-218ENST00000519774 RNF212Q495C1 297 aa8.22□□□□□ -1.09
HPS4-218ENST00000519774 FAM74A3Q4VXF1 159 aa8.22□□□□□ -1.09
HPS4-218ENST00000519774 SOHLH1Q5JUK2 328 aa8.22□□□□□ -1.09
HPS4-218ENST00000519774 FAM231DQ6ZW35 169 aa8.22□□□□□ -1.09
HPS4-218ENST00000519774 SFRP2Q96HF1 295 aa8.22□□□□□ -1.09
HPS4-218ENST00000519774 SSBP4Q9BWG4 385 aaPredicted RBP8.22□□□□□ -1.09
HPS4-218ENST00000519774 SMDT1Q9H4I9 107 aa8.22□□□□□ -1.09
HPS4-218ENST00000519774 LINC00588Q9Y4M8 146 aa8.22□□□□□ -1.09
HPS4-218ENST00000519774 K7EQD1 137 aa8.21□□□□□ -1.1
HPS4-218ENST00000519774 SRIP30626 198 aa8.21□□□□□ -1.1
HPS4-218ENST00000519774 RHOHQ15669 191 aa8.21□□□□□ -1.1
HPS4-218ENST00000519774 ADIRFQ15847 76 aa8.21□□□□□ -1.1
HPS4-218ENST00000519774 ZFP2Q6ZN57 461 aa8.21□□□□□ -1.1
HPS4-218ENST00000519774 SLC25A29Q8N8R3 303 aa8.21□□□□□ -1.1
HPS4-218ENST00000519774 PRADC1Q9BSG0 188 aa8.21□□□□□ -1.1
HPS4-218ENST00000519774 NAT8Q9UHE5 227 aa8.21□□□□□ -1.1
HPS4-218ENST00000519774 IGLV2-18A0A075B6J9 118 aa8.2□□□□□ -1.1
HPS4-218ENST00000519774 TRBV6-4A0A1B0GX49 114 aa8.2□□□□□ -1.1
HPS4-218ENST00000519774 A0A1W2PPQ1 181 aa8.2□□□□□ -1.1
HPS4-218ENST00000519774 RPL23P62829 140 aaKnown RBP8.2□□□□□ -1.1
HPS4-218ENST00000519774 ZNF56Q15929 161 aa8.2□□□□□ -1.1
HPS4-218ENST00000519774 ESRGQ1W209 222 aa8.2□□□□□ -1.1
HPS4-218ENST00000519774 UFSP1Q6NVU6 142 aa8.2□□□□□ -1.1
HPS4-218ENST00000519774 LYZL1Q6UWQ5 148 aa8.2□□□□□ -1.1
HPS4-218ENST00000519774 Q6ZSN1 163 aa8.2□□□□□ -1.1
HPS4-218ENST00000519774 AP1S3Q96PC3 154 aa8.2□□□□□ -1.1
HPS4-218ENST00000519774 CRYGDP07320 174 aa8.19□□□□□ -1.1
HPS4-218ENST00000519774 CTRLP40313 264 aa8.19□□□□□ -1.1
HPS4-218ENST00000519774 CACNG7P62955 275 aa8.19□□□□□ -1.1
HPS4-218ENST00000519774 NEGR1Q7Z3B1 354 aa8.19□□□□□ -1.1
HPS4-218ENST00000519774 C14orf178Q8N769 122 aaPredicted RBP8.19□□□□□ -1.1
HPS4-218ENST00000519774 ISOC2Q96AB3 205 aa8.19□□□□□ -1.1
HPS4-218ENST00000519774 OSTCQ9NRP0 149 aa8.19□□□□□ -1.1
HPS4-218ENST00000519774 A8MWL6 223 aa8.18□□□□□ -1.1
HPS4-218ENST00000519774 F2Z2F3 143 aa8.18□□□□□ -1.1
HPS4-218ENST00000519774 M0R2N4 97 aa8.18□□□□□ -1.1
HPS4-218ENST00000519774 SMIM17P0DL12 118 aa8.18□□□□□ -1.1
HPS4-218ENST00000519774 FAM3BP58499 235 aaPredicted RBP8.18□□□□□ -1.1
HPS4-218ENST00000519774 CT83Q5H943 113 aa8.18□□□□□ -1.1
HPS4-218ENST00000519774 C15orf54Q8N8G6 183 aa8.18□□□□□ -1.1
HPS4-218ENST00000519774 MSRB1Q9NZV6 116 aa8.18□□□□□ -1.1
HPS4-218ENST00000519774 MRPS16Q9Y3D3 137 aaKnown RBP8.18□□□□□ -1.1
HPS4-218ENST00000519774 GAGE12JA6NER3 117 aa8.17□□□□□ -1.1
HPS4-218ENST00000519774 F5H697 171 aa8.17□□□□□ -1.1
HPS4-218ENST00000519774 MGPP08493 103 aa8.17□□□□□ -1.1
HPS4-218ENST00000519774 GAGE1Q13065 139 aa8.17□□□□□ -1.1
HPS4-218ENST00000519774 GAGE4Q13068 117 aa8.17□□□□□ -1.1
HPS4-218ENST00000519774 GAGE5Q13069 117 aa8.17□□□□□ -1.1
HPS4-218ENST00000519774 GAGE13Q4V321 117 aa8.17□□□□□ -1.1
HPS4-218ENST00000519774 OR10G8Q8NGN5 311 aa8.17□□□□□ -1.1
HPS4-218ENST00000519774 ZNRF2Q8NHG8 242 aa8.17□□□□□ -1.1
HPS4-218ENST00000519774 GTSF1Q8WW33 167 aa8.17□□□□□ -1.1
HPS4-218ENST00000519774 PGLYRP4Q96LB8 373 aa8.17□□□□□ -1.1
HPS4-218ENST00000519774 DNAH1Q9P2D7 4330 aa8.17□□□□□ -1.1
HPS4-218ENST00000519774 TRGC1P0CF51 173 aa8.16□□□□□ -1.1
HPS4-218ENST00000519774 NTF3P20783 257 aa8.16□□□□□ -1.1
HPS4-218ENST00000519774 LYPD5Q6UWN5 251 aa8.16□□□□□ -1.1
HPS4-218ENST00000519774 SH2D6Q7Z4S9 175 aa8.16□□□□□ -1.1
HPS4-218ENST00000519774 TSKUQ8WUA8 353 aa8.16□□□□□ -1.1
HPS4-218ENST00000519774 V9GYV3 84 aa8.16□□□□□ -1.1
HPS4-218ENST00000519774 EVI2AP22794 236 aa8.15□□□□□ -1.1
HPS4-218ENST00000519774 RAB4BP61018 213 aa8.15□□□□□ -1.1
HPS4-218ENST00000519774 TWIST1Q15672 202 aa8.15□□□□□ -1.1
HPS4-218ENST00000519774 BORCS7Q96B45 105 aa8.15□□□□□ -1.1
HPS4-218ENST00000519774 Q9UF83 564 aa8.15□□□□□ -1.1
HPS4-218ENST00000519774 KIF25-AS1Q9Y6Z4 181 aa8.15□□□□□ -1.1
HPS4-218ENST00000519774 SACSQ9NZJ4 4579 aa8.15□□□□□ -1.11
HPS4-218ENST00000519774 RYR2Q92736 4967 aa8.14□□□□□ -1.11
HPS4-218ENST00000519774 HIGD1CA8MV81 97 aa8.14□□□□□ -1.11
HPS4-218ENST00000519774 WDR73Q6P4I2 378 aa8.14□□□□□ -1.11
HPS4-218ENST00000519774 COMMD7Q86VX2 200 aa8.14□□□□□ -1.11
HPS4-218ENST00000519774 ATP6V0E2Q8NHE4 81 aa8.14□□□□□ -1.11
HPS4-218ENST00000519774 UPK3BQ9BT76 320 aa8.14□□□□□ -1.11
HPS4-218ENST00000519774 CNFNQ9BYD5 112 aa8.14□□□□□ -1.11
HPS4-218ENST00000519774 GFRA4Q9GZZ7 299 aa8.14□□□□□ -1.11
HPS4-218ENST00000519774 DPH3P1Q9H4G8 78 aa8.14□□□□□ -1.11
HPS4-218ENST00000519774 Q9H8V8 135 aa8.14□□□□□ -1.11
HPS4-218ENST00000519774 NBDYA0A0U1RRE5 68 aa8.13□□□□□ -1.11
HPS4-218ENST00000519774 LINC00694P0DN24 101 aa8.13□□□□□ -1.11
HPS4-218ENST00000519774 LINC00315P59091 139 aa8.13□□□□□ -1.11
HPS4-218ENST00000519774 RPL36AP83881 106 aaKnown RBP8.13□□□□□ -1.11
HPS4-218ENST00000519774 UQCC3Q6UW78 93 aa8.13□□□□□ -1.11
HPS4-218ENST00000519774 WFDC10BQ8IUB3 73 aa8.13□□□□□ -1.11
HPS4-218ENST00000519774 RPL36ALQ969Q0 106 aaKnown RBP8.13□□□□□ -1.11
HPS4-218ENST00000519774 TRBV10-1A0A0K0K1A3 114 aa8.12□□□□□ -1.11
HPS4-218ENST00000519774 A0A1B0GUT8 65 aa8.12□□□□□ -1.11
HPS4-218ENST00000519774 SIVA1O15304 175 aa8.12□□□□□ -1.11
HPS4-218ENST00000519774 SMIM15Q7Z3B0 74 aa8.12□□□□□ -1.11
HPS4-218ENST00000519774 NEXN-AS1Q8NBZ9 246 aa8.12□□□□□ -1.11
HPS4-218ENST00000519774 GTSF1LQ9H1H1 148 aa8.12□□□□□ -1.11
HPS4-218ENST00000519774 VPS13DQ5THJ4 4388 aa8.11□□□□□ -1.11
HPS4-218ENST00000519774 RYR3Q15413 4870 aa8.11□□□□□ -1.11
HPS4-218ENST00000519774 TMEM238LA0A1B0GVL6 79 aa8.11□□□□□ -1.11
HPS4-218ENST00000519774 FAM231BA6NCW3 169 aa8.11□□□□□ -1.11
HPS4-218ENST00000519774 F8W036 122 aa8.11□□□□□ -1.11
HPS4-218ENST00000519774 FOXA3P55318 350 aaPredicted RBP8.11□□□□□ -1.11
HPS4-218ENST00000519774 TIRAPP58753 221 aa8.11□□□□□ -1.11
HPS4-218ENST00000519774 OR10J3Q5JRS4 329 aa8.11□□□□□ -1.11
HPS4-218ENST00000519774 SUMO4Q6EEV6 95 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms