RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 IQCJQ1A5X6 159 aa0.65□□□□□ -2.31
SQLE-202ENST00000518604 OR2T2Q6IF00 324 aa0.65□□□□□ -2.31
SQLE-202ENST00000518604 Q6ZS92 163 aa0.65□□□□□ -2.31
SQLE-202ENST00000518604 C5orf56Q8N8D9 126 aa0.65□□□□□ -2.31
SQLE-202ENST00000518604 IFI27L1Q96BM0 104 aa0.65□□□□□ -2.31
SQLE-202ENST00000518604 CGREF1Q99674 301 aa0.65□□□□□ -2.31
SQLE-202ENST00000518604 PDCD10Q9BUL8 212 aa0.65□□□□□ -2.31
SQLE-202ENST00000518604 C10orf95Q9H7T3 257 aa0.65□□□□□ -2.31
SQLE-202ENST00000518604 MRPL35Q9NZE8 188 aaKnown RBP0.65□□□□□ -2.31
SQLE-202ENST00000518604 BLMP54132 1417 aaPredicted RBP0.64□□□□□ -2.31
SQLE-202ENST00000518604 ESPL1Q14674 2120 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 FAM92AA1XBS5 289 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 CLPSL1A2RUU4 121 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 FAM25AB3EWG3 89 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 FAM25CB3EWG5 89 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 FAM25GB3EWG6 89 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 APOC1P02654 83 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 FGF7P21781 194 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 Q6AWC8 147 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 SLC48A1Q6P1K1 146 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 KCNRGQ8N5I3 272 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 C10orf82Q8WW14 230 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 PP6455Q8WZ26 134 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 LINC00208Q96KT6 92 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 SEC11CQ9BY50 192 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 ATG5Q9H1Y0 275 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 TMEM242Q9NWH2 141 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 SCN3BQ9NY72 215 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 ROBO1Q9Y6N7 1651 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 MED13LQ71F56 2210 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 AFDNP55196 1824 aaKnown RBP0.64□□□□□ -2.31
SQLE-202ENST00000518604 FAM135AQ9P2D6 1515 aa0.64□□□□□ -2.31
SQLE-202ENST00000518604 ABCA1O95477 2261 aa0.63□□□□□ -2.31
SQLE-202ENST00000518604 MYOM2P54296 1465 aa0.63□□□□□ -2.31
SQLE-202ENST00000518604 KNTC1P50748 2209 aa0.63□□□□□ -2.31
SQLE-202ENST00000518604 A0A087WTM6 91 aa0.63□□□□□ -2.31
SQLE-202ENST00000518604 CORTO00230 105 aa0.63□□□□□ -2.31
SQLE-202ENST00000518604 IFNGP01579 166 aa0.63□□□□□ -2.31
SQLE-202ENST00000518604 CCKP06307 115 aa0.63□□□□□ -2.31
SQLE-202ENST00000518604 C9orf116Q5BN46 136 aaPredicted RBP0.63□□□□□ -2.31
SQLE-202ENST00000518604 SPANXN1Q5VSR9 72 aa0.63□□□□□ -2.31
SQLE-202ENST00000518604 XAF1Q6GPH4 301 aa0.63□□□□□ -2.31
SQLE-202ENST00000518604 UNQ5815/PRO19632Q6UWF5 114 aa0.63□□□□□ -2.31
SQLE-202ENST00000518604 Q8N8P6 123 aa0.63□□□□□ -2.31
SQLE-202ENST00000518604 CCL19Q99731 98 aa0.63□□□□□ -2.31
SQLE-202ENST00000518604 PSMG3Q9BT73 122 aaPredicted RBP0.63□□□□□ -2.31
SQLE-202ENST00000518604 RERGLQ9H628 205 aa0.63□□□□□ -2.31
SQLE-202ENST00000518604 BOKQ9UMX3 212 aaPredicted RBP0.63□□□□□ -2.31
SQLE-202ENST00000518604 SERP1Q9Y6X1 66 aa0.63□□□□□ -2.31
SQLE-202ENST00000518604 PHIPQ8WWQ0 1821 aa0.62□□□□□ -2.31
SQLE-202ENST00000518604 MED12Q93074 2177 aa0.62□□□□□ -2.31
SQLE-202ENST00000518604 TRAV12-3A0A0B4J271 114 aa0.62□□□□□ -2.31
SQLE-202ENST00000518604 HIGD1CA8MV81 97 aa0.62□□□□□ -2.31
SQLE-202ENST00000518604 MIF4GDA9UHW6 222 aaKnown RBP0.62□□□□□ -2.31
SQLE-202ENST00000518604 IL5P05113 134 aa0.62□□□□□ -2.31
SQLE-202ENST00000518604 INSL4Q14641 139 aa0.62□□□□□ -2.31
SQLE-202ENST00000518604 SPINK9Q5DT21 86 aa0.62□□□□□ -2.31
SQLE-202ENST00000518604 NDUFA11Q86Y39 141 aa0.62□□□□□ -2.31
SQLE-202ENST00000518604 TSKUQ8WUA8 353 aa0.62□□□□□ -2.31
SQLE-202ENST00000518604 TMEM203Q969S6 136 aa0.62□□□□□ -2.31
SQLE-202ENST00000518604 TMEM141Q96I45 108 aa0.62□□□□□ -2.31
SQLE-202ENST00000518604 MAP2P11137 1827 aaKnown RBP0.61□□□□□ -2.31
SQLE-202ENST00000518604 PZPP20742 1482 aa0.61□□□□□ -2.31
SQLE-202ENST00000518604 NRXN2Q9P2S2 1712 aa0.61□□□□□ -2.31
SQLE-202ENST00000518604 RBBP6Q7Z6E9 1792 aaKnown RBP0.61□□□□□ -2.31
SQLE-202ENST00000518604 MCRIP1C9JLW8 97 aa0.61□□□□□ -2.31
SQLE-202ENST00000518604 F6UZH7 168 aa0.61□□□□□ -2.31
SQLE-202ENST00000518604 K7EIL1 84 aa0.61□□□□□ -2.31
SQLE-202ENST00000518604 NDUFB6O95139 128 aa0.61□□□□□ -2.31
SQLE-202ENST00000518604 UBE2D1P51668 147 aa0.61□□□□□ -2.31
SQLE-202ENST00000518604 UBE2G1P62253 170 aa0.61□□□□□ -2.31
SQLE-202ENST00000518604 Q6ZQY7 126 aa0.61□□□□□ -2.31
SQLE-202ENST00000518604 SPTSSAQ969W0 71 aa0.61□□□□□ -2.31
SQLE-202ENST00000518604 C14orf144Q96I85 54 aa0.61□□□□□ -2.31
SQLE-202ENST00000518604 DSCR8Q96T75 97 aa0.61□□□□□ -2.31
SQLE-202ENST00000518604 DAPK1P53355 1430 aa0.61□□□□□ -2.31
SQLE-202ENST00000518604 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
SQLE-202ENST00000518604 DOCK1Q14185 1865 aa0.61□□□□□ -2.31
SQLE-202ENST00000518604 IFT140Q96RY7 1462 aa0.61□□□□□ -2.31
SQLE-202ENST00000518604 PATJQ8NI35 1801 aa0.6□□□□□ -2.31
SQLE-202ENST00000518604 OOSP1A8MZH6 123 aa0.6□□□□□ -2.31
SQLE-202ENST00000518604 AKAIN1P0CW23 69 aa0.6□□□□□ -2.31
SQLE-202ENST00000518604 CCL3L1P16619 93 aa0.6□□□□□ -2.31
SQLE-202ENST00000518604 S100A7L2Q5SY68 101 aa0.6□□□□□ -2.31
SQLE-202ENST00000518604 C10orf99Q6UWK7 81 aa0.6□□□□□ -2.31
SQLE-202ENST00000518604 NAA60Q9H7X0 242 aa0.6□□□□□ -2.31
SQLE-202ENST00000518604 CASKIN1Q8WXD9 1431 aa0.6□□□□□ -2.31
SQLE-202ENST00000518604 SIPA1L3O60292 1781 aaPredicted RBP0.6□□□□□ -2.31
SQLE-202ENST00000518604 ARFGEF1Q9Y6D6 1849 aa0.59□□□□□ -2.31
SQLE-202ENST00000518604 ZFYVE16Q7Z3T8 1539 aa0.59□□□□□ -2.31
SQLE-202ENST00000518604 NAIPQ13075 1403 aa0.59□□□□□ -2.31
SQLE-202ENST00000518604 TRBV30A0A0K0K1B3 111 aa0.59□□□□□ -2.31
SQLE-202ENST00000518604 TEX49A0A1B0GTD5 131 aa0.59□□□□□ -2.31
SQLE-202ENST00000518604 TNFP01375 233 aa0.59□□□□□ -2.31
SQLE-202ENST00000518604 CBLN1P23435 193 aa0.59□□□□□ -2.31
SQLE-202ENST00000518604 S100PP25815 95 aa0.59□□□□□ -2.31
SQLE-202ENST00000518604 ELOF1P60002 83 aaKnown RBP0.59□□□□□ -2.31
SQLE-202ENST00000518604 CATR1Q13166 79 aa0.59□□□□□ -2.31
SQLE-202ENST00000518604 Q56UQ5 140 aa0.59□□□□□ -2.31
SQLE-202ENST00000518604 Q86TA4 180 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms