RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 DERL1Q9BUN8 251 aa16.68■□□□□ 0.26
PVT1-204ENST00000517525 OR5AL1P0C617 328 aa16.67■□□□□ 0.26
PVT1-204ENST00000517525 BCL2P10415 239 aa16.67■□□□□ 0.26
PVT1-204ENST00000517525 MSRB1Q9NZV6 116 aa16.67■□□□□ 0.26
PVT1-204ENST00000517525 M0R381 172 aa16.66■□□□□ 0.26
PVT1-204ENST00000517525 IGLV2-8P01709 118 aa16.66■□□□□ 0.26
PVT1-204ENST00000517525 RPL19P84098 196 aaKnown RBP16.66■□□□□ 0.26
PVT1-204ENST00000517525 hCG_2014768A0A024R1R8 64 aa16.65■□□□□ 0.26
PVT1-204ENST00000517525 CENPWQ5EE01 88 aa16.65■□□□□ 0.26
PVT1-204ENST00000517525 C14orf178Q8N769 122 aaPredicted RBP16.65■□□□□ 0.26
PVT1-204ENST00000517525 VAX2Q9UIW0 290 aa16.65■□□□□ 0.26
PVT1-204ENST00000517525 TRBV10-1A0A0K0K1A3 114 aa16.63■□□□□ 0.25
PVT1-204ENST00000517525 GAGE12JA6NER3 117 aa16.63■□□□□ 0.25
PVT1-204ENST00000517525 C16orf90A8MZG2 172 aa16.63■□□□□ 0.25
PVT1-204ENST00000517525 GAGE1Q13065 139 aa16.63■□□□□ 0.25
PVT1-204ENST00000517525 GAGE4Q13068 117 aa16.63■□□□□ 0.25
PVT1-204ENST00000517525 GAGE5Q13069 117 aa16.63■□□□□ 0.25
PVT1-204ENST00000517525 GAGE13Q4V321 117 aa16.63■□□□□ 0.25
PVT1-204ENST00000517525 OR10J3Q5JRS4 329 aa16.63■□□□□ 0.25
PVT1-204ENST00000517525 PRR27Q6MZM9 219 aa16.63■□□□□ 0.25
PVT1-204ENST00000517525 Q9UF83 564 aa16.63■□□□□ 0.25
PVT1-204ENST00000517525 TNFRSF18Q9Y5U5 241 aa16.63■□□□□ 0.25
PVT1-204ENST00000517525 A0A087WWL8 130 aa16.62■□□□□ 0.25
PVT1-204ENST00000517525 C19orf71A6NCJ1 209 aa16.62■□□□□ 0.25
PVT1-204ENST00000517525 FAM74A4Q5TZK3 123 aa16.62■□□□□ 0.25
PVT1-204ENST00000517525 SPATA12Q7Z6I5 190 aa16.62■□□□□ 0.25
PVT1-204ENST00000517525 OR10AG1Q8NH19 301 aa16.62■□□□□ 0.25
PVT1-204ENST00000517525 A0A087WWC5 75 aa16.61■□□□□ 0.25
PVT1-204ENST00000517525 IBA57-AS1B1ANH7 110 aa16.61■□□□□ 0.25
PVT1-204ENST00000517525 GNG4P50150 75 aa16.61■□□□□ 0.25
PVT1-204ENST00000517525 LYPD6BQ8NI32 183 aa16.61■□□□□ 0.25
PVT1-204ENST00000517525 MED9Q9NWA0 146 aa16.61■□□□□ 0.25
PVT1-204ENST00000517525 RAB19A4D1S5 217 aa16.6■□□□□ 0.25
PVT1-204ENST00000517525 RPS20P60866 119 aaKnown RBP16.6■□□□□ 0.25
PVT1-204ENST00000517525 BLOC1S1P78537 153 aa16.6■□□□□ 0.25
PVT1-204ENST00000517525 BIN3Q9NQY0 253 aa16.6■□□□□ 0.25
PVT1-204ENST00000517525 TRBV20OR9-2A0A075B6H5 130 aa16.59■□□□□ 0.25
PVT1-204ENST00000517525 RAB4BP61018 213 aa16.59■□□□□ 0.25
PVT1-204ENST00000517525 OR10G8Q8NGN5 311 aa16.59■□□□□ 0.25
PVT1-204ENST00000517525 KRTAP10-2P60368 255 aa16.58■□□□□ 0.24
PVT1-204ENST00000517525 ERVFC1-1P60608 527 aa16.58■□□□□ 0.24
PVT1-204ENST00000517525 DAZAP1Q96EP5 407 aaKnown RBP16.58■□□□□ 0.24
PVT1-204ENST00000517525 PCLOQ9Y6V0 5065 aa16.57■□□□□ 0.24
PVT1-204ENST00000517525 LRP1BQ9NZR2 4599 aa16.57■□□□□ 0.24
PVT1-204ENST00000517525 CDK2AP2O75956 126 aa16.57■□□□□ 0.24
PVT1-204ENST00000517525 IGLC6P0CF74 106 aa16.57■□□□□ 0.24
PVT1-204ENST00000517525 EREGO14944 169 aa16.56■□□□□ 0.24
PVT1-204ENST00000517525 LAGE3Q14657 143 aa16.56■□□□□ 0.24
PVT1-204ENST00000517525 SPANXN1Q5VSR9 72 aa16.56■□□□□ 0.24
PVT1-204ENST00000517525 ALKAL2Q6UX46 152 aa16.56■□□□□ 0.24
PVT1-204ENST00000517525 PGPEP1Q9NXJ5 209 aa16.56■□□□□ 0.24
PVT1-204ENST00000517525 A0A087WTM6 91 aa16.55■□□□□ 0.24
PVT1-204ENST00000517525 RPL36AP83881 106 aaKnown RBP16.55■□□□□ 0.24
PVT1-204ENST00000517525 OR2D3Q8NGH3 330 aa16.55■□□□□ 0.24
PVT1-204ENST00000517525 RPL36ALQ969Q0 106 aaKnown RBP16.55■□□□□ 0.24
PVT1-204ENST00000517525 KIF25-AS1Q9Y6Z4 181 aa16.55■□□□□ 0.24
PVT1-204ENST00000517525 TRBV7-3A0A075B6L6 115 aa16.54■□□□□ 0.24
PVT1-204ENST00000517525 TMEM250H0YL14 139 aa16.54■□□□□ 0.24
PVT1-204ENST00000517525 UBE2D3P61077 147 aa16.54■□□□□ 0.24
PVT1-204ENST00000517525 UBE2D2P62837 147 aa16.54■□□□□ 0.24
PVT1-204ENST00000517525 RYR1P21817 5038 aa16.54■□□□□ 0.24
PVT1-204ENST00000517525 A0A1B0GVG6 124 aa16.53■□□□□ 0.24
PVT1-204ENST00000517525 XKRY2A2RUG3 117 aa16.53■□□□□ 0.24
PVT1-204ENST00000517525 NDUFS6O75380 124 aaKnown RBP16.53■□□□□ 0.24
PVT1-204ENST00000517525 CDPF1Q6NVV7 123 aa16.53■□□□□ 0.24
PVT1-204ENST00000517525 F2Z2F3 143 aa16.52■□□□□ 0.24
PVT1-204ENST00000517525 P01737 135 aa16.52■□□□□ 0.24
PVT1-204ENST00000517525 FER1L6-AS1Q8NA97 138 aa16.52■□□□□ 0.24
PVT1-204ENST00000517525 RBFOX3A6NFN3 312 aa16.51■□□□□ 0.23
PVT1-204ENST00000517525 IGHV3-30P01768 117 aa16.51■□□□□ 0.23
PVT1-204ENST00000517525 IGHV3-33P01772 117 aa16.51■□□□□ 0.23
PVT1-204ENST00000517525 IGHV3-30-3P0DP02 117 aa16.51■□□□□ 0.23
PVT1-204ENST00000517525 IGHV3-30-5P0DP03 117 aa16.51■□□□□ 0.23
PVT1-204ENST00000517525 CACNG7P62955 275 aa16.51■□□□□ 0.23
PVT1-204ENST00000517525 AP1S3Q96PC3 154 aa16.51■□□□□ 0.23
PVT1-204ENST00000517525 MUC21A0A0G2JKD1 596 aa16.5■□□□□ 0.23
PVT1-204ENST00000517525 MUC21A0A140T8X8 626 aa16.5■□□□□ 0.23
PVT1-204ENST00000517525 WDR73Q6P4I2 378 aa16.5■□□□□ 0.23
PVT1-204ENST00000517525 GZMBP10144 247 aa16.49■□□□□ 0.23
PVT1-204ENST00000517525 ZNF56Q15929 161 aa16.49■□□□□ 0.23
PVT1-204ENST00000517525 NEXN-AS1Q8NBZ9 246 aa16.49■□□□□ 0.23
PVT1-204ENST00000517525 NUDT10Q8NFP7 164 aa16.49■□□□□ 0.23
PVT1-204ENST00000517525 NUDT11Q96G61 164 aa16.49■□□□□ 0.23
PVT1-204ENST00000517525 CHCHD7Q9BUK0 85 aa16.49■□□□□ 0.23
PVT1-204ENST00000517525 NKX2-5P52952 324 aaPredicted RBP16.48■□□□□ 0.23
PVT1-204ENST00000517525 NIT1Q86X76 327 aa16.48■□□□□ 0.23
PVT1-204ENST00000517525 OCC1Q8TAD7 63 aa16.48■□□□□ 0.23
PVT1-204ENST00000517525 LRCOL1A6NCL2 159 aa16.47■□□□□ 0.23
PVT1-204ENST00000517525 SMIM17P0DL12 118 aa16.47■□□□□ 0.23
PVT1-204ENST00000517525 TOR2AQ5JU69 321 aa16.47■□□□□ 0.23
PVT1-204ENST00000517525 DNAH5Q8TE73 4624 aa16.47■□□□□ 0.23
PVT1-204ENST00000517525 TRAV8-3A0A0A6YYJ7 113 aa16.46■□□□□ 0.23
PVT1-204ENST00000517525 TM2D2Q9BX73 214 aa16.46■□□□□ 0.23
PVT1-204ENST00000517525 CNFNQ9BYD5 112 aa16.46■□□□□ 0.23
PVT1-204ENST00000517525 K7EN84 100 aa16.45■□□□□ 0.22
PVT1-204ENST00000517525 CTRLP40313 264 aa16.45■□□□□ 0.22
PVT1-204ENST00000517525 Q8N3U1 123 aa16.45■□□□□ 0.22
PVT1-204ENST00000517525 F5H697 171 aa16.44■□□□□ 0.22
PVT1-204ENST00000517525 PSCAO43653 123 aa16.44■□□□□ 0.22
PVT1-204ENST00000517525 LYZL1Q6UWQ5 148 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms