RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 CHCHD1Q96BP2 118 aaKnown RBP11.58□□□□□ -0.56
NUP54-214ENST00000514307 KIF25-AS1Q9Y6Z4 181 aa11.58□□□□□ -0.56
NUP54-214ENST00000514307 AGRNO00468 2067 aa11.57□□□□□ -0.56
NUP54-214ENST00000514307 CIDEAO60543 219 aa11.57□□□□□ -0.56
NUP54-214ENST00000514307 PRM2P04554 102 aa11.57□□□□□ -0.56
NUP54-214ENST00000514307 LINC00614P0C842 121 aa11.57□□□□□ -0.56
NUP54-214ENST00000514307 ESDP10768 282 aa11.57□□□□□ -0.56
NUP54-214ENST00000514307 TMEM18Q96B42 140 aa11.57□□□□□ -0.56
NUP54-214ENST00000514307 OVOL2Q9BRP0 275 aa11.57□□□□□ -0.56
NUP54-214ENST00000514307 MAP1LC3AQ9H492 121 aa11.57□□□□□ -0.56
NUP54-214ENST00000514307 G3V4G9 280 aa11.56□□□□□ -0.56
NUP54-214ENST00000514307 RHODO00212 210 aa11.56□□□□□ -0.56
NUP54-214ENST00000514307 TNFRSF6BO95407 300 aa11.56□□□□□ -0.56
NUP54-214ENST00000514307 CRYGDP07320 174 aa11.56□□□□□ -0.56
NUP54-214ENST00000514307 PMCHP20382 165 aa11.56□□□□□ -0.56
NUP54-214ENST00000514307 HIST3H2BBQ8N257 126 aa11.56□□□□□ -0.56
NUP54-214ENST00000514307 PRSS47A8MTI9 375 aa11.55□□□□□ -0.56
NUP54-214ENST00000514307 H7C1H1 209 aa11.55□□□□□ -0.56
NUP54-214ENST00000514307 HSBP1O75506 76 aa11.55□□□□□ -0.56
NUP54-214ENST00000514307 SERF1AO75920 110 aa11.55□□□□□ -0.56
NUP54-214ENST00000514307 FA2HQ7L5A8 372 aa11.55□□□□□ -0.56
NUP54-214ENST00000514307 C20orf78Q9BR46 151 aa11.55□□□□□ -0.56
NUP54-214ENST00000514307 JPT2Q9H910 190 aa11.55□□□□□ -0.56
NUP54-214ENST00000514307 NXT2Q9NPJ8 142 aaKnown RBP11.55□□□□□ -0.56
NUP54-214ENST00000514307 ANK2Q01484 3957 aa11.55□□□□□ -0.56
NUP54-214ENST00000514307 A0A087WWL8 130 aa11.54□□□□□ -0.56
NUP54-214ENST00000514307 TRGV1A0A0A0MS02 117 aa11.54□□□□□ -0.56
NUP54-214ENST00000514307 SMKR1H3BMG3 65 aa11.54□□□□□ -0.56
NUP54-214ENST00000514307 RS1O15537 224 aa11.54□□□□□ -0.56
NUP54-214ENST00000514307 LINC00315P59091 139 aa11.54□□□□□ -0.56
NUP54-214ENST00000514307 IQCJQ1A5X6 159 aa11.54□□□□□ -0.56
NUP54-214ENST00000514307 FAM74A4Q5TZK3 123 aa11.54□□□□□ -0.56
NUP54-214ENST00000514307 ZFP2Q6ZN57 461 aa11.54□□□□□ -0.56
NUP54-214ENST00000514307 PACRGQ96M98 296 aaPredicted RBP11.54□□□□□ -0.56
NUP54-214ENST00000514307 SAMD10Q9BYL1 202 aa11.54□□□□□ -0.56
NUP54-214ENST00000514307 NOP10Q9NPE3 64 aaKnown RBP11.54□□□□□ -0.56
NUP54-214ENST00000514307 LOC389332A0A1B0GUA5 103 aa11.53□□□□□ -0.56
NUP54-214ENST00000514307 RNASEKQ6P5S7 137 aaKnown RBP11.53□□□□□ -0.56
NUP54-214ENST00000514307 OR4C5Q8NGB2 326 aa11.53□□□□□ -0.56
NUP54-214ENST00000514307 OR11H2Q8NH07 326 aa11.53□□□□□ -0.56
NUP54-214ENST00000514307 IL17DQ8TAD2 202 aa11.53□□□□□ -0.56
NUP54-214ENST00000514307 RNF183Q96D59 192 aa11.53□□□□□ -0.56
NUP54-214ENST00000514307 NCR2O95944 276 aa11.52□□□□□ -0.57
NUP54-214ENST00000514307 NPYP01303 97 aa11.52□□□□□ -0.57
NUP54-214ENST00000514307 MIFP14174 115 aa11.52□□□□□ -0.57
NUP54-214ENST00000514307 ZNF56Q15929 161 aa11.52□□□□□ -0.57
NUP54-214ENST00000514307 PDZD11Q5EBL8 140 aa11.52□□□□□ -0.57
NUP54-214ENST00000514307 CFAP126Q5VTH2 177 aa11.52□□□□□ -0.57
NUP54-214ENST00000514307 ST20Q9HBF5 79 aa11.52□□□□□ -0.57
NUP54-214ENST00000514307 MRPL16Q9NX20 251 aaKnown RBP11.52□□□□□ -0.57
NUP54-214ENST00000514307 TP53TG1Q9Y2A0 90 aa11.52□□□□□ -0.57
NUP54-214ENST00000514307 FBN3Q75N90 2809 aa11.52□□□□□ -0.57
NUP54-214ENST00000514307 AKR1D1P51857 326 aa11.51□□□□□ -0.57
NUP54-214ENST00000514307 SUMO4Q6EEV6 95 aa11.51□□□□□ -0.57
NUP54-214ENST00000514307 Q8N8P6 123 aa11.51□□□□□ -0.57
NUP54-214ENST00000514307 NRACQ8N912 160 aa11.51□□□□□ -0.57
NUP54-214ENST00000514307 AP5S1Q9NUS5 200 aa11.51□□□□□ -0.57
NUP54-214ENST00000514307 X6R8D5 127 aa11.51□□□□□ -0.57
NUP54-214ENST00000514307 TRGV2A0A075B6R0 118 aa11.5□□□□□ -0.57
NUP54-214ENST00000514307 TRAV26-2A0A0B4J265 109 aa11.5□□□□□ -0.57
NUP54-214ENST00000514307 K7EMI3 77 aa11.5□□□□□ -0.57
NUP54-214ENST00000514307 NUPR1O60356 82 aa11.5□□□□□ -0.57
NUP54-214ENST00000514307 FABP4P15090 132 aa11.5□□□□□ -0.57
NUP54-214ENST00000514307 IFI27P40305 119 aaPredicted RBP11.5□□□□□ -0.57
NUP54-214ENST00000514307 DEFB135Q30KP9 77 aa11.5□□□□□ -0.57
NUP54-214ENST00000514307 HIST1H2BLQ99880 126 aa11.5□□□□□ -0.57
NUP54-214ENST00000514307 NIT2Q9NQR4 276 aa11.5□□□□□ -0.57
NUP54-214ENST00000514307 TRAV4A0A0B4J268 109 aa11.49□□□□□ -0.57
NUP54-214ENST00000514307 VCYO14598 125 aa11.49□□□□□ -0.57
NUP54-214ENST00000514307 GATA1P15976 413 aaPredicted RBP11.49□□□□□ -0.57
NUP54-214ENST00000514307 G0S2P27469 103 aa11.49□□□□□ -0.57
NUP54-214ENST00000514307 SUMO2P61956 95 aaKnown RBP11.49□□□□□ -0.57
NUP54-214ENST00000514307 RPL32P62910 135 aaKnown RBP11.49□□□□□ -0.57
NUP54-214ENST00000514307 Q6ZTI0 123 aa11.49□□□□□ -0.57
NUP54-214ENST00000514307 EDA2RQ9HAV5 297 aa11.49□□□□□ -0.57
NUP54-214ENST00000514307 NOTCH3Q9UM47 2321 aa11.48□□□□□ -0.57
NUP54-214ENST00000514307 TRBV6-5A0A0K0K1A5 114 aa11.48□□□□□ -0.57
NUP54-214ENST00000514307 PLAC8L1A1L4L8 177 aa11.48□□□□□ -0.57
NUP54-214ENST00000514307 LYRM9A8MSI8 78 aa11.48□□□□□ -0.57
NUP54-214ENST00000514307 M0QY20 66 aa11.48□□□□□ -0.57
NUP54-214ENST00000514307 AMTP48728 403 aa11.48□□□□□ -0.57
NUP54-214ENST00000514307 EMP1P54849 157 aa11.48□□□□□ -0.57
NUP54-214ENST00000514307 KPRPQ5T749 579 aaPredicted RBP11.48□□□□□ -0.57
NUP54-214ENST00000514307 UFSP1Q6NVU6 142 aa11.48□□□□□ -0.57
NUP54-214ENST00000514307 DNAJC30Q96LL9 226 aa11.48□□□□□ -0.57
NUP54-214ENST00000514307 VWFP04275 2813 aa11.47□□□□□ -0.57
NUP54-214ENST00000514307 GAGE12BA1L429 117 aa11.47□□□□□ -0.57
NUP54-214ENST00000514307 TCAPO15273 167 aa11.47□□□□□ -0.57
NUP54-214ENST00000514307 GAGE7O76087 117 aa11.47□□□□□ -0.57
NUP54-214ENST00000514307 IGHV3-53P01767 116 aa11.47□□□□□ -0.57
NUP54-214ENST00000514307 GAGE12FP0CL80 117 aa11.47□□□□□ -0.57
NUP54-214ENST00000514307 GAGE12GP0CL81 117 aa11.47□□□□□ -0.57
NUP54-214ENST00000514307 GAGE12IP0CL82 117 aa11.47□□□□□ -0.57
NUP54-214ENST00000514307 OR10D4PQ8NGN7 298 aa11.47□□□□□ -0.57
NUP54-214ENST00000514307 TNFRSF18Q9Y5U5 241 aa11.47□□□□□ -0.57
NUP54-214ENST00000514307 IGHV3-73A0A0B4J1V6 119 aa11.46□□□□□ -0.57
NUP54-214ENST00000514307 LINC01546A6NGU7 62 aa11.46□□□□□ -0.57
NUP54-214ENST00000514307 GAS8-AS1O95177 125 aa11.46□□□□□ -0.57
NUP54-214ENST00000514307 LINC00310P59036 64 aa11.46□□□□□ -0.57
NUP54-214ENST00000514307 URB1-AS1Q96HZ7 61 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms