RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 MCRIP2Q9BUT9 160 aaKnown RBP9.32□□□□□ -0.92
PVT1-203ENST00000513868 GSN-AS1Q9NRJ2 163 aa9.32□□□□□ -0.92
PVT1-203ENST00000513868 IGLV2-18A0A075B6J9 118 aa9.32□□□□□ -0.92
PVT1-203ENST00000513868 LINC01546A6NGU7 62 aa9.32□□□□□ -0.92
PVT1-203ENST00000513868 CRYGDP07320 174 aa9.32□□□□□ -0.92
PVT1-203ENST00000513868 ZNF876PQ49A33 203 aa9.32□□□□□ -0.92
PVT1-203ENST00000513868 RASL10AQ92737 203 aa9.32□□□□□ -0.92
PVT1-203ENST00000513868 MAP1LC3AQ9H492 121 aa9.32□□□□□ -0.92
PVT1-203ENST00000513868 AP5S1Q9NUS5 200 aa9.32□□□□□ -0.92
PVT1-203ENST00000513868 COL6A5A8TX70 2615 aa9.31□□□□□ -0.92
PVT1-203ENST00000513868 A0A087WWL8 130 aa9.31□□□□□ -0.92
PVT1-203ENST00000513868 A0A096LNJ9 63 aa9.31□□□□□ -0.92
PVT1-203ENST00000513868 MGPP08493 103 aa9.31□□□□□ -0.92
PVT1-203ENST00000513868 ZNF415Q09FC8 603 aa9.31□□□□□ -0.92
PVT1-203ENST00000513868 MORN3Q6PF18 240 aaPredicted RBP9.31□□□□□ -0.92
PVT1-203ENST00000513868 FA2HQ7L5A8 372 aa9.31□□□□□ -0.92
PVT1-203ENST00000513868 GTSCR1Q86UQ5 136 aa9.31□□□□□ -0.92
PVT1-203ENST00000513868 PTH2Q96A98 100 aa9.31□□□□□ -0.92
PVT1-203ENST00000513868 NIT2Q9NQR4 276 aa9.31□□□□□ -0.92
PVT1-203ENST00000513868 M0R2P5 195 aa9.3□□□□□ -0.92
PVT1-203ENST00000513868 IL17DQ8TAD2 202 aa9.3□□□□□ -0.92
PVT1-203ENST00000513868 IGHV3OR16-12A0A075B7B8 117 aa9.29□□□□□ -0.92
PVT1-203ENST00000513868 SMIM17P0DL12 118 aa9.29□□□□□ -0.92
PVT1-203ENST00000513868 LINC00173Q6ZV60 143 aa9.29□□□□□ -0.92
PVT1-203ENST00000513868 Q8N976 141 aa9.29□□□□□ -0.92
PVT1-203ENST00000513868 RNASE8Q8TDE3 154 aaKnown RBP9.29□□□□□ -0.92
PVT1-203ENST00000513868 RPL39LQ96EH5 51 aaKnown RBP9.29□□□□□ -0.92
PVT1-203ENST00000513868 TMEM208Q9BTX3 173 aa9.29□□□□□ -0.92
PVT1-203ENST00000513868 CMYA5Q8N3K9 4069 aa9.29□□□□□ -0.92
PVT1-203ENST00000513868 C3orf79P0CE67 100 aa9.29□□□□□ -0.92
PVT1-203ENST00000513868 PIK3CD-AS1Q5SR53 167 aa9.29□□□□□ -0.92
PVT1-203ENST00000513868 SUMO4Q6EEV6 95 aa9.29□□□□□ -0.92
PVT1-203ENST00000513868 C3orf56Q8N813 242 aa9.29□□□□□ -0.92
PVT1-203ENST00000513868 Q8N8P6 123 aa9.29□□□□□ -0.92
PVT1-203ENST00000513868 C1QTNF4Q9BXJ3 329 aa9.29□□□□□ -0.92
PVT1-203ENST00000513868 NXT2Q9NPJ8 142 aaKnown RBP9.29□□□□□ -0.92
PVT1-203ENST00000513868 KRTDAPP60985 99 aa9.28□□□□□ -0.92
PVT1-203ENST00000513868 FAM74A4Q5TZK3 123 aa9.28□□□□□ -0.92
PVT1-203ENST00000513868 SHISA2Q6UWI4 295 aa9.28□□□□□ -0.92
PVT1-203ENST00000513868 ZNF705AQ6ZN79 300 aaPredicted RBP9.28□□□□□ -0.92
PVT1-203ENST00000513868 SPXQ9BT56 116 aa9.28□□□□□ -0.92
PVT1-203ENST00000513868 SCGB1D1O95968 90 aa9.27□□□□□ -0.93
PVT1-203ENST00000513868 UFSP1Q6NVU6 142 aa9.27□□□□□ -0.93
PVT1-203ENST00000513868 C20orf78Q9BR46 151 aa9.27□□□□□ -0.93
PVT1-203ENST00000513868 GOLT1BQ9Y3E0 138 aa9.27□□□□□ -0.93
PVT1-203ENST00000513868 PLAC8L1A1L4L8 177 aa9.26□□□□□ -0.93
PVT1-203ENST00000513868 M0QY20 66 aa9.26□□□□□ -0.93
PVT1-203ENST00000513868 LEPROTL1O95214 131 aa9.26□□□□□ -0.93
PVT1-203ENST00000513868 SUMO2P61956 95 aaKnown RBP9.26□□□□□ -0.93
PVT1-203ENST00000513868 C12orf54Q6X4T0 127 aa9.26□□□□□ -0.93
PVT1-203ENST00000513868 TMEM263Q8WUH6 116 aaKnown RBP9.26□□□□□ -0.93
PVT1-203ENST00000513868 TMEM158Q8WZ71 300 aa9.26□□□□□ -0.93
PVT1-203ENST00000513868 SMIM2Q9BVW6 85 aa9.26□□□□□ -0.93
PVT1-203ENST00000513868 CSTL1Q9H114 145 aa9.26□□□□□ -0.93
PVT1-203ENST00000513868 NBEAL2Q6ZNJ1 2754 aa9.26□□□□□ -0.93
PVT1-203ENST00000513868 A8MWV9 139 aa9.26□□□□□ -0.93
PVT1-203ENST00000513868 F5H697 171 aa9.26□□□□□ -0.93
PVT1-203ENST00000513868 SPATA12Q7Z6I5 190 aa9.26□□□□□ -0.93
PVT1-203ENST00000513868 MRPL16Q9NX20 251 aaKnown RBP9.26□□□□□ -0.93
PVT1-203ENST00000513868 PPP1R17O96001 155 aa9.25□□□□□ -0.93
PVT1-203ENST00000513868 BTF3P20290 206 aaKnown RBP9.25□□□□□ -0.93
PVT1-203ENST00000513868 CFAP126Q5VTH2 177 aa9.25□□□□□ -0.93
PVT1-203ENST00000513868 HBDP02042 147 aa9.24□□□□□ -0.93
PVT1-203ENST00000513868 POLR2KP53803 58 aaKnown RBP9.24□□□□□ -0.93
PVT1-203ENST00000513868 ZNF56Q15929 161 aa9.24□□□□□ -0.93
PVT1-203ENST00000513868 TRBV6-5A0A0K0K1A5 114 aa9.23□□□□□ -0.93
PVT1-203ENST00000513868 TCAPO15273 167 aa9.23□□□□□ -0.93
PVT1-203ENST00000513868 RS1O15537 224 aa9.23□□□□□ -0.93
PVT1-203ENST00000513868 FCER1GP30273 86 aa9.23□□□□□ -0.93
PVT1-203ENST00000513868 RPL32P62910 135 aaKnown RBP9.23□□□□□ -0.93
PVT1-203ENST00000513868 OXLD1Q5BKU9 147 aa9.23□□□□□ -0.93
PVT1-203ENST00000513868 NDUFAF3Q9BU61 184 aa9.23□□□□□ -0.93
PVT1-203ENST00000513868 EDA2RQ9HAV5 297 aa9.23□□□□□ -0.93
PVT1-203ENST00000513868 HSPB8Q9UJY1 196 aa9.23□□□□□ -0.93
PVT1-203ENST00000513868 IGHV3-73A0A0B4J1V6 119 aa9.23□□□□□ -0.93
PVT1-203ENST00000513868 SYS1-DBNDD2H3BUS1 97 aa9.23□□□□□ -0.93
PVT1-203ENST00000513868 DAZ2Q13117 558 aaKnown RBP9.23□□□□□ -0.93
PVT1-203ENST00000513868 LAGE3Q14657 143 aa9.23□□□□□ -0.93
PVT1-203ENST00000513868 TEX43Q6ZNM6 134 aa9.23□□□□□ -0.93
PVT1-203ENST00000513868 Q6ZSN1 163 aa9.23□□□□□ -0.93
PVT1-203ENST00000513868 C16orf74Q96GX8 76 aa9.23□□□□□ -0.93
PVT1-203ENST00000513868 TMEM70Q9BUB7 260 aa9.23□□□□□ -0.93
PVT1-203ENST00000513868 KRTAP10-11P60412 298 aa9.22□□□□□ -0.93
PVT1-203ENST00000513868 Q6ZTI0 123 aa9.22□□□□□ -0.93
PVT1-203ENST00000513868 ST20Q9HBF5 79 aa9.22□□□□□ -0.93
PVT1-203ENST00000513868 KIR2DL5BA0A0G2JN68 375 aa9.21□□□□□ -0.93
PVT1-203ENST00000513868 KIR2DL5BA0A0G2JPC4 375 aa9.21□□□□□ -0.93
PVT1-203ENST00000513868 RRN3P1Q2M238 152 aa9.21□□□□□ -0.93
PVT1-203ENST00000513868 LGALS9BQ3B8N2 356 aa9.21□□□□□ -0.93
PVT1-203ENST00000513868 NEGR1Q7Z3B1 354 aa9.21□□□□□ -0.93
PVT1-203ENST00000513868 KIR2DL5AQ8N109 375 aa9.21□□□□□ -0.93
PVT1-203ENST00000513868 KIR2DL5BQ8NHK3 375 aa9.21□□□□□ -0.93
PVT1-203ENST00000513868 OVOL2Q9BRP0 275 aa9.21□□□□□ -0.93
PVT1-203ENST00000513868 NOP10Q9NPE3 64 aaKnown RBP9.21□□□□□ -0.93
PVT1-203ENST00000513868 TRGV1A0A0A0MS02 117 aa9.2□□□□□ -0.94
PVT1-203ENST00000513868 SDHAF1A6NFY7 115 aa9.2□□□□□ -0.94
PVT1-203ENST00000513868 PCP4L1A6NKN8 68 aa9.2□□□□□ -0.94
PVT1-203ENST00000513868 K7EMI3 77 aa9.2□□□□□ -0.94
PVT1-203ENST00000513868 EGFEM1PQ0D2K5 195 aa9.2□□□□□ -0.94
PVT1-203ENST00000513868 ZNF664Q8N3J9 261 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms