RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 C9orf47Q6ZRZ4 202 aa6.11□□□□□ -1.43
NUP54-211ENST00000512151 GOLT1AQ6ZVE7 132 aa6.11□□□□□ -1.43
NUP54-211ENST00000512151 ARL6IP6Q8N6S5 226 aa6.11□□□□□ -1.43
NUP54-211ENST00000512151 NTN5Q8WTR8 489 aaPredicted RBP6.11□□□□□ -1.43
NUP54-211ENST00000512151 FAM19A4Q96LR4 140 aa6.11□□□□□ -1.43
NUP54-211ENST00000512151 NOP10Q9NPE3 64 aaKnown RBP6.11□□□□□ -1.43
NUP54-211ENST00000512151 PEX7O00628 323 aa6.1□□□□□ -1.43
NUP54-211ENST00000512151 PHOX2AO14813 284 aa6.1□□□□□ -1.43
NUP54-211ENST00000512151 DUSP14O95147 198 aaKnown RBP6.1□□□□□ -1.43
NUP54-211ENST00000512151 TYMSP04818 313 aa6.1□□□□□ -1.43
NUP54-211ENST00000512151 CSN1S1P47710 185 aa6.1□□□□□ -1.43
NUP54-211ENST00000512151 SPINK13Q1W4C9 94 aa6.1□□□□□ -1.43
NUP54-211ENST00000512151 KCNIP4Q6PIL6 250 aa6.1□□□□□ -1.43
NUP54-211ENST00000512151 LINC00612Q8N6U2 182 aa6.1□□□□□ -1.43
NUP54-211ENST00000512151 OR10J6PQ8NGY7 276 aa6.1□□□□□ -1.43
NUP54-211ENST00000512151 Q8TAT8 98 aa6.1□□□□□ -1.43
NUP54-211ENST00000512151 CMTM2Q8TAZ6 248 aa6.1□□□□□ -1.43
NUP54-211ENST00000512151 VSIG2Q96IQ7 327 aa6.1□□□□□ -1.43
NUP54-211ENST00000512151 ZNF492Q9P255 531 aa6.1□□□□□ -1.43
NUP54-211ENST00000512151 TRAV9-1A0A075B6T8 112 aa6.09□□□□□ -1.43
NUP54-211ENST00000512151 RBAKDNA6NC62 111 aa6.09□□□□□ -1.43
NUP54-211ENST00000512151 H3BNG1 76 aa6.09□□□□□ -1.43
NUP54-211ENST00000512151 S100A8P05109 93 aa6.09□□□□□ -1.43
NUP54-211ENST00000512151 RPL35P42766 123 aaKnown RBP6.09□□□□□ -1.43
NUP54-211ENST00000512151 FABP9Q0Z7S8 132 aa6.09□□□□□ -1.43
NUP54-211ENST00000512151 PRR9Q5T870 116 aa6.09□□□□□ -1.43
NUP54-211ENST00000512151 Q6ZQT7 251 aa6.09□□□□□ -1.43
NUP54-211ENST00000512151 OCC1Q8TAD7 63 aa6.09□□□□□ -1.43
NUP54-211ENST00000512151 SFRP2Q96HF1 295 aa6.09□□□□□ -1.43
NUP54-211ENST00000512151 LINC00477Q96M19 166 aa6.09□□□□□ -1.43
NUP54-211ENST00000512151 MSRB1Q9NZV6 116 aa6.09□□□□□ -1.43
NUP54-211ENST00000512151 PSG8Q9UQ74 426 aa6.09□□□□□ -1.43
NUP54-211ENST00000512151 TRAV12-2A0A075B6T6 113 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 J3KRW8 73 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 HIST1H2BKO60814 126 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 INSP01308 110 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 TRGC2P03986 189 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 HIST1H2BJP06899 126 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 HIST1H2BOP23527 126 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 HIST1H2BBP33778 126 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 AKR1D1P51857 326 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 ZNF138P52744 262 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 HIST1H2BDP58876 126 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 TAS2R60P59551 318 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 HIST1H2BCP62807 126 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 HIST2H2BEQ16778 126 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.08□□□□□ -1.44
NUP54-211ENST00000512151 SCXQ7RTU7 201 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 PRNTQ86SH4 94 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 Q8N814 137 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 TMEM75Q8N9X5 138 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 OR10G8Q8NGN5 311 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 HIST1H2BHQ93079 126 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 C8orf49Q96NF6 230 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 HIST1H2BNQ99877 126 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 HIST1H2BMQ99879 126 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 PPP1R14DQ9NXH3 145 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 KLF12Q9Y4X4 402 aa6.08□□□□□ -1.44
NUP54-211ENST00000512151 TIMM8BQ9Y5J9 83 aaPredicted RBP6.08□□□□□ -1.44
NUP54-211ENST00000512151 TRBV6-1A0A0K0K1D8 114 aa6.07□□□□□ -1.44
NUP54-211ENST00000512151 SERTM2A0A1B0GWG4 89 aa6.07□□□□□ -1.44
NUP54-211ENST00000512151 PGPEP1LA6NFU8 196 aa6.07□□□□□ -1.44
NUP54-211ENST00000512151 K7EN84 100 aa6.07□□□□□ -1.44
NUP54-211ENST00000512151 TRGC1P0CF51 173 aa6.07□□□□□ -1.44
NUP54-211ENST00000512151 HTN1P15515 57 aa6.07□□□□□ -1.44
NUP54-211ENST00000512151 CRISP2P16562 243 aa6.07□□□□□ -1.44
NUP54-211ENST00000512151 GNG4P50150 75 aa6.07□□□□□ -1.44
NUP54-211ENST00000512151 RPL19P84098 196 aaKnown RBP6.07□□□□□ -1.44
NUP54-211ENST00000512151 TMEM183BQ1AE95 376 aa6.07□□□□□ -1.44
NUP54-211ENST00000512151 TMEM78Q5T7P6 136 aa6.07□□□□□ -1.44
NUP54-211ENST00000512151 ZFAND2AQ8N6M9 145 aa6.07□□□□□ -1.44
NUP54-211ENST00000512151 SMIM12Q96EX1 92 aa6.07□□□□□ -1.44
NUP54-211ENST00000512151 GAGE12BA1L429 117 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 KLLNB2CW77 178 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 GAGE7O76087 117 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 GCGP01275 180 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 IGLV2-8P01709 118 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 GAGE12FP0CL80 117 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 GAGE12GP0CL81 117 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 GAGE12IP0CL82 117 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 SMIM6P0DI80 62 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 CDKN1BP46527 198 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 ZNF80P51504 273 aaPredicted RBP6.06□□□□□ -1.44
NUP54-211ENST00000512151 NDUFA6P56556 154 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 ODF1Q14990 250 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 CENPWQ5EE01 88 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 GFI1BQ5VTD9 330 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 Q86TA4 180 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 RNASE8Q8TDE3 154 aaKnown RBP6.06□□□□□ -1.44
NUP54-211ENST00000512151 DAZAP1Q96EP5 407 aaKnown RBP6.06□□□□□ -1.44
NUP54-211ENST00000512151 C16orf74Q96GX8 76 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 ODF3Q96PU9 254 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 LINC01587Q99440 93 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 OSTCQ9NRP0 149 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 IL36BQ9NZH7 164 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 K7EQM0 130 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 ZNF324O75467 553 aaPredicted RBP6.06□□□□□ -1.44
NUP54-211ENST00000512151 LTAP01374 205 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 S100A9P06702 114 aaKnown RBP6.06□□□□□ -1.44
NUP54-211ENST00000512151 LEPP41159 167 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms