RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 C11orf72Q8NBR9 251 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 DIRC1Q969H9 104 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 RNF185Q96GF1 192 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 MRPL35Q9NZE8 188 aaKnown RBP3.68□□□□□ -1.82
NUP54-210ENST00000510884 LINC00588Q9Y4M8 146 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 FRYLO94915 3013 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 CEP295Q9C0D2 2601 aa3.67□□□□□ -1.82
NUP54-210ENST00000510884 IGKV1D-8A0A087WSZ0 117 aa3.67□□□□□ -1.82
NUP54-210ENST00000510884 A0A0J9YXV3 536 aa3.67□□□□□ -1.82
NUP54-210ENST00000510884 TRBV10-2A0A0K0K1G8 114 aa3.67□□□□□ -1.82
NUP54-210ENST00000510884 RBMY1BA6NDE4 496 aaKnown RBP3.67□□□□□ -1.82
NUP54-210ENST00000510884 RBMY1EA6NEQ0 496 aaKnown RBP3.67□□□□□ -1.82
NUP54-210ENST00000510884 J3QLW9 94 aa3.67□□□□□ -1.82
NUP54-210ENST00000510884 PPYP01298 95 aa3.67□□□□□ -1.82
NUP54-210ENST00000510884 RBMY1DP0C7P1 496 aaKnown RBP3.67□□□□□ -1.82
NUP54-210ENST00000510884 RBMY1A1P0DJD3 496 aaKnown RBP3.67□□□□□ -1.82
NUP54-210ENST00000510884 ZNF80P51504 273 aaPredicted RBP3.67□□□□□ -1.82
NUP54-210ENST00000510884 ZNF136P52737 540 aa3.67□□□□□ -1.82
NUP54-210ENST00000510884 NDPQ00604 133 aa3.67□□□□□ -1.82
NUP54-210ENST00000510884 ZNF816Q0VGE8 651 aaPredicted RBP3.67□□□□□ -1.82
NUP54-210ENST00000510884 CIRBPQ14011 172 aaKnown RBP3.67□□□□□ -1.82
NUP54-210ENST00000510884 RBMY1FQ15415 496 aaKnown RBP3.67□□□□□ -1.82
NUP54-210ENST00000510884 ASB16-AS1Q495Z4 193 aa3.67□□□□□ -1.82
NUP54-210ENST00000510884 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.67□□□□□ -1.82
NUP54-210ENST00000510884 ATP11AUNQ6ZP68 121 aa3.67□□□□□ -1.82
NUP54-210ENST00000510884 SDIM1Q6ZPB5 146 aa3.67□□□□□ -1.82
NUP54-210ENST00000510884 C6orf223Q8N319 242 aa3.67□□□□□ -1.82
NUP54-210ENST00000510884 FAM19A2Q8N3H0 131 aa3.67□□□□□ -1.82
NUP54-210ENST00000510884 Q9H3A6 140 aa3.67□□□□□ -1.82
NUP54-210ENST00000510884 MIA3Q5JRA6 1907 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 A0A0B4J2C4 111 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 IGKV1D-13A0A0B4J2D9 117 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 CTXND1A0A1B0GTU2 59 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 C12orf77C9JDV5 145 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 H3BVH4 76 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 K7ERJ3 54 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 IGKV1-5P01602 117 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 SAA1P0DJI8 122 aaPredicted RBP3.66□□□□□ -1.82
NUP54-210ENST00000510884 IGKV1-13P0DP09 117 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 FUSP35637 526 aaKnown RBP eCLIP3.66□□□□□ -1.82
NUP54-210ENST00000510884 NCBP2P52298 156 aaKnown RBP eCLIP3.66□□□□□ -1.82
NUP54-210ENST00000510884 RBM3P98179 157 aaKnown RBP3.66□□□□□ -1.82
NUP54-210ENST00000510884 KLKP1Q107X0 134 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 INSL4Q14641 139 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 C6orf99Q4VX62 202 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 C9orf66Q5T8R8 295 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 DAND5Q8N907 189 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 SLC50A1Q9BRV3 221 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 NPCDR1Q9BY65 106 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 OSTCQ9NRP0 149 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 CHD7Q9P2D1 2997 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 XCL2Q9UBD3 114 aa3.66□□□□□ -1.82
NUP54-210ENST00000510884 RAI1Q7Z5J4 1906 aaPredicted RBP3.66□□□□□ -1.82
NUP54-210ENST00000510884 SPTA1P02549 2419 aa3.65□□□□□ -1.82
NUP54-210ENST00000510884 NRXN2Q9P2S2 1712 aa3.65□□□□□ -1.82
NUP54-210ENST00000510884 TRAV13-2A0A0B4J235 113 aa3.65□□□□□ -1.83
NUP54-210ENST00000510884 IGHV1-69DA0A0B4J2H0 117 aa3.65□□□□□ -1.83
NUP54-210ENST00000510884 IGHV3-16A0A0C4DH30 117 aa3.65□□□□□ -1.83
NUP54-210ENST00000510884 C19orf71A6NCJ1 209 aa3.65□□□□□ -1.83
NUP54-210ENST00000510884 C17orf51A8MQB3 221 aa3.65□□□□□ -1.83
NUP54-210ENST00000510884 J3QRE1 110 aa3.65□□□□□ -1.83
NUP54-210ENST00000510884 RNASE2P10153 161 aaKnown RBP3.65□□□□□ -1.83
NUP54-210ENST00000510884 SLC25A16P16260 332 aa3.65□□□□□ -1.83
NUP54-210ENST00000510884 S100A3P33764 101 aa3.65□□□□□ -1.83
NUP54-210ENST00000510884 Q1RN00 199 aa3.65□□□□□ -1.83
NUP54-210ENST00000510884 Q1T7F1 81 aa3.65□□□□□ -1.83
NUP54-210ENST00000510884 C1orf100Q5SVJ3 147 aa3.65□□□□□ -1.83
NUP54-210ENST00000510884 S100A7L2Q5SY68 101 aa3.65□□□□□ -1.83
NUP54-210ENST00000510884 NDUFA11Q86Y39 141 aa3.65□□□□□ -1.83
NUP54-210ENST00000510884 DLG5Q8TDM6 1919 aa3.65□□□□□ -1.83
NUP54-210ENST00000510884 DSPP15924 2871 aaKnown RBP3.65□□□□□ -1.83
NUP54-210ENST00000510884 DNHD1Q96M86 4753 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 IGHV6-1A0A0B4J1U7 121 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 LOC107984156A0A0G2JMH3 177 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 E7EQL1 145 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 IGHV3-9P01782 118 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 INAFM2P0DMQ5 153 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 MGST1P10620 155 aaKnown RBP3.64□□□□□ -1.83
NUP54-210ENST00000510884 CCL4P13236 92 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 IFI27P40305 119 aaPredicted RBP3.64□□□□□ -1.83
NUP54-210ENST00000510884 LINC00313P59037 77 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 KRTAP10-1P60331 282 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 BLCAPP62952 87 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 RPS21P63220 83 aaKnown RBP3.64□□□□□ -1.83
NUP54-210ENST00000510884 SS18Q15532 418 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 RHOHQ15669 191 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 IL17AQ16552 155 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 ESRGQ1W209 222 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 MRPL51Q4U2R6 128 aaKnown RBP3.64□□□□□ -1.83
NUP54-210ENST00000510884 LINC01554Q52M75 96 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 Q6JHZ5 121 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 SCXQ7RTU7 201 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 ARL17AQ8IVW1 177 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 LINC00337Q8N6G1 96 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 TIMM21Q9BVV7 248 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 TP73-AS1Q9UF72 201 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 SPTBN2O15020 2390 aa3.64□□□□□ -1.83
NUP54-210ENST00000510884 CEP250Q9BV73 2442 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms