RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 PRR27Q6MZM9 219 aa10.95□□□□□ -0.66
PDLIM5-212ENST00000509333 ALKAL2Q6UX46 152 aa10.95□□□□□ -0.66
PDLIM5-212ENST00000509333 Q6ZRN7 208 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-212ENST00000509333 ATP6V0E2Q8NHE4 81 aa10.95□□□□□ -0.66
PDLIM5-212ENST00000509333 LYPD6BQ8NI32 183 aa10.95□□□□□ -0.66
PDLIM5-212ENST00000509333 LY96Q9Y6Y9 160 aa10.95□□□□□ -0.66
PDLIM5-212ENST00000509333 A0A087WWL8 130 aa10.94□□□□□ -0.66
PDLIM5-212ENST00000509333 K7EP13 123 aa10.94□□□□□ -0.66
PDLIM5-212ENST00000509333 SNAI2O43623 268 aa10.94□□□□□ -0.66
PDLIM5-212ENST00000509333 TAGLN2P37802 199 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-212ENST00000509333 ZFP82Q8N141 532 aa10.94□□□□□ -0.66
PDLIM5-212ENST00000509333 GTSF1LQ9H1H1 148 aa10.94□□□□□ -0.66
PDLIM5-212ENST00000509333 TRBV20OR9-2A0A075B6H5 130 aa10.93□□□□□ -0.66
PDLIM5-212ENST00000509333 C19orf71A6NCJ1 209 aa10.93□□□□□ -0.66
PDLIM5-212ENST00000509333 GAGE12JA6NER3 117 aa10.93□□□□□ -0.66
PDLIM5-212ENST00000509333 RHODO00212 210 aa10.93□□□□□ -0.66
PDLIM5-212ENST00000509333 OR5AL1P0C617 328 aa10.93□□□□□ -0.66
PDLIM5-212ENST00000509333 LINC00694P0DN24 101 aa10.93□□□□□ -0.66
PDLIM5-212ENST00000509333 EVI2AP22794 236 aa10.93□□□□□ -0.66
PDLIM5-212ENST00000509333 GNG4P50150 75 aa10.93□□□□□ -0.66
PDLIM5-212ENST00000509333 GAGE1Q13065 139 aa10.93□□□□□ -0.66
PDLIM5-212ENST00000509333 GAGE4Q13068 117 aa10.93□□□□□ -0.66
PDLIM5-212ENST00000509333 GAGE5Q13069 117 aa10.93□□□□□ -0.66
PDLIM5-212ENST00000509333 GAGE13Q4V321 117 aa10.93□□□□□ -0.66
PDLIM5-212ENST00000509333 OR10AG1Q8NH19 301 aa10.93□□□□□ -0.66
PDLIM5-212ENST00000509333 LELP1Q5T871 98 aa10.92□□□□□ -0.66
PDLIM5-212ENST00000509333 SMIM12Q96EX1 92 aa10.92□□□□□ -0.66
PDLIM5-212ENST00000509333 LRP1BQ9NZR2 4599 aa10.91□□□□□ -0.66
PDLIM5-212ENST00000509333 TRAV8-6A0A0B4J262 113 aa10.91□□□□□ -0.66
PDLIM5-212ENST00000509333 IGHV3-38A0A0C4DH36 116 aa10.91□□□□□ -0.66
PDLIM5-212ENST00000509333 MUC21A0A0G2JKD1 596 aa10.91□□□□□ -0.66
PDLIM5-212ENST00000509333 MUC21A0A140T8X8 626 aa10.91□□□□□ -0.66
PDLIM5-212ENST00000509333 RBFOX3A6NFN3 312 aa10.91□□□□□ -0.66
PDLIM5-212ENST00000509333 FAM74A4Q5TZK3 123 aa10.91□□□□□ -0.66
PDLIM5-212ENST00000509333 DAZAP1Q96EP5 407 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-212ENST00000509333 GZMBP10144 247 aa10.9□□□□□ -0.66
PDLIM5-212ENST00000509333 OCC1Q8TAD7 63 aa10.9□□□□□ -0.66
PDLIM5-212ENST00000509333 IGLC6P0CF74 106 aa10.89□□□□□ -0.67
PDLIM5-212ENST00000509333 RPS20P60866 119 aaKnown RBP10.89□□□□□ -0.67
PDLIM5-212ENST00000509333 SSTP61278 116 aa10.89□□□□□ -0.67
PDLIM5-212ENST00000509333 LINC01556Q5JQF7 62 aa10.89□□□□□ -0.67
PDLIM5-212ENST00000509333 OR10J3Q5JRS4 329 aa10.89□□□□□ -0.67
PDLIM5-212ENST00000509333 NUDT10Q8NFP7 164 aa10.89□□□□□ -0.67
PDLIM5-212ENST00000509333 OR2D3Q8NGH3 330 aa10.89□□□□□ -0.67
PDLIM5-212ENST00000509333 NUDT11Q96G61 164 aa10.89□□□□□ -0.67
PDLIM5-212ENST00000509333 MSRB1Q9NZV6 116 aa10.89□□□□□ -0.67
PDLIM5-212ENST00000509333 KIF25-AS1Q9Y6Z4 181 aa10.89□□□□□ -0.67
PDLIM5-212ENST00000509333 DNAH5Q8TE73 4624 aa10.88□□□□□ -0.67
PDLIM5-212ENST00000509333 RAB4BP61018 213 aa10.88□□□□□ -0.67
PDLIM5-212ENST00000509333 SPANXN1Q5VSR9 72 aa10.88□□□□□ -0.67
PDLIM5-212ENST00000509333 NFE4Q86UQ8 179 aa10.88□□□□□ -0.67
PDLIM5-212ENST00000509333 BIN3Q9NQY0 253 aa10.88□□□□□ -0.67
PDLIM5-212ENST00000509333 TRBV10-1A0A0K0K1A3 114 aa10.87□□□□□ -0.67
PDLIM5-212ENST00000509333 IBA57-AS1B1ANH7 110 aa10.87□□□□□ -0.67
PDLIM5-212ENST00000509333 TMEM250H0YL14 139 aa10.87□□□□□ -0.67
PDLIM5-212ENST00000509333 C10orf126Q8N4M7 172 aa10.87□□□□□ -0.67
PDLIM5-212ENST00000509333 RYR1P21817 5038 aa10.87□□□□□ -0.67
PDLIM5-212ENST00000509333 P01737 135 aa10.86□□□□□ -0.67
PDLIM5-212ENST00000509333 KRTAP10-2P60368 255 aa10.86□□□□□ -0.67
PDLIM5-212ENST00000509333 SPATA12Q7Z6I5 190 aa10.86□□□□□ -0.67
PDLIM5-212ENST00000509333 OR10G8Q8NGN5 311 aa10.86□□□□□ -0.67
PDLIM5-212ENST00000509333 TRBV7-3A0A075B6L6 115 aa10.85□□□□□ -0.67
PDLIM5-212ENST00000509333 A0A087WWC5 75 aa10.85□□□□□ -0.67
PDLIM5-212ENST00000509333 K7EN84 100 aa10.85□□□□□ -0.67
PDLIM5-212ENST00000509333 UBE2D3P61077 147 aa10.85□□□□□ -0.67
PDLIM5-212ENST00000509333 UBE2D2P62837 147 aa10.85□□□□□ -0.67
PDLIM5-212ENST00000509333 FER1L6-AS1Q8NA97 138 aa10.85□□□□□ -0.67
PDLIM5-212ENST00000509333 C16orf90A8MZG2 172 aa10.84□□□□□ -0.67
PDLIM5-212ENST00000509333 F2Z2F3 143 aa10.84□□□□□ -0.67
PDLIM5-212ENST00000509333 NDUFS6O75380 124 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-212ENST00000509333 IGHV3-30P01768 117 aa10.84□□□□□ -0.67
PDLIM5-212ENST00000509333 IGHV3-33P01772 117 aa10.84□□□□□ -0.67
PDLIM5-212ENST00000509333 IGHV3-30-3P0DP02 117 aa10.84□□□□□ -0.67
PDLIM5-212ENST00000509333 IGHV3-30-5P0DP03 117 aa10.84□□□□□ -0.67
PDLIM5-212ENST00000509333 RPL36AP83881 106 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-212ENST00000509333 RPL36ALQ969Q0 106 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-212ENST00000509333 XKRY2A2RUG3 117 aa10.83□□□□□ -0.68
PDLIM5-212ENST00000509333 F5H697 171 aa10.83□□□□□ -0.68
PDLIM5-212ENST00000509333 CACNG7P62955 275 aa10.83□□□□□ -0.68
PDLIM5-212ENST00000509333 WDR73Q6P4I2 378 aa10.83□□□□□ -0.68
PDLIM5-212ENST00000509333 LYZL1Q6UWQ5 148 aa10.83□□□□□ -0.68
PDLIM5-212ENST00000509333 Q8N3U1 123 aa10.83□□□□□ -0.68
PDLIM5-212ENST00000509333 NEXN-AS1Q8NBZ9 246 aa10.83□□□□□ -0.68
PDLIM5-212ENST00000509333 RNASE7Q9H1E1 156 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-212ENST00000509333 FAM210AQ96ND0 272 aa10.82□□□□□ -0.68
PDLIM5-212ENST00000509333 TPPP3Q9BW30 176 aa10.82□□□□□ -0.68
PDLIM5-212ENST00000509333 EIF5A2Q9GZV4 153 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-212ENST00000509333 A0A087WTM6 91 aa10.81□□□□□ -0.68
PDLIM5-212ENST00000509333 SRP19P09132 144 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-212ENST00000509333 NTF3P20783 257 aa10.81□□□□□ -0.68
PDLIM5-212ENST00000509333 ZNF56Q15929 161 aa10.81□□□□□ -0.68
PDLIM5-212ENST00000509333 TOR2AQ5JU69 321 aa10.81□□□□□ -0.68
PDLIM5-212ENST00000509333 PGPEP1Q9NXJ5 209 aa10.81□□□□□ -0.68
PDLIM5-212ENST00000509333 SMIM17P0DL12 118 aa10.8□□□□□ -0.68
PDLIM5-212ENST00000509333 DAZ4Q86SG3 579 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-212ENST00000509333 NIT1Q86X76 327 aa10.8□□□□□ -0.68
PDLIM5-212ENST00000509333 RPP21Q9H633 154 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-212ENST00000509333 DAZ3Q9NR90 486 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-212ENST00000509333 M0QY20 66 aa10.79□□□□□ -0.68
PDLIM5-212ENST00000509333 TEX261Q6UWH6 196 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms