RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 PYYP10082 97 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 GATA1P15976 413 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-211ENST00000508546 TMEM183BQ1AE95 376 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 LELP1Q5T871 98 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 Q6AWC8 147 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 TMEM183AQ8IXX5 376 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 CIRBP-AS1Q8TBR5 109 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 SUN5Q8TC36 379 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 FXYD5Q96DB9 178 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 OR51M1Q9H341 326 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 TRAV8-3A0A0A6YYJ7 113 aa6.16□□□□□ -1.42
NEDD9-211ENST00000508546 A0A1W2PRE2 83 aa6.16□□□□□ -1.42
NEDD9-211ENST00000508546 RBAKDNA6NC62 111 aa6.16□□□□□ -1.42
NEDD9-211ENST00000508546 GGTLC3B5MD39 225 aa6.16□□□□□ -1.42
NEDD9-211ENST00000508546 M0R2P5 195 aa6.16□□□□□ -1.42
NEDD9-211ENST00000508546 LINC01620Q4KN68 170 aa6.16□□□□□ -1.42
NEDD9-211ENST00000508546 FAM159AQ6UWV7 190 aa6.16□□□□□ -1.42
NEDD9-211ENST00000508546 Q8TAT8 98 aa6.16□□□□□ -1.42
NEDD9-211ENST00000508546 SMIM7Q9BQ49 75 aa6.16□□□□□ -1.42
NEDD9-211ENST00000508546 PARLQ9H300 379 aa6.16□□□□□ -1.42
NEDD9-211ENST00000508546 LENEPQ9Y5L5 61 aa6.16□□□□□ -1.42
NEDD9-211ENST00000508546 SCO2A0A1W2PP80 73 aa6.15□□□□□ -1.42
NEDD9-211ENST00000508546 M0R036 132 aa6.15□□□□□ -1.42
NEDD9-211ENST00000508546 LECT2O14960 151 aa6.15□□□□□ -1.42
NEDD9-211ENST00000508546 SCO1O75880 301 aa6.15□□□□□ -1.42
NEDD9-211ENST00000508546 NBEAP1P0C6P0 100 aa6.15□□□□□ -1.42
NEDD9-211ENST00000508546 ZNF674Q2M3X9 581 aa6.15□□□□□ -1.42
NEDD9-211ENST00000508546 SLC25A29Q8N8R3 303 aa6.15□□□□□ -1.42
NEDD9-211ENST00000508546 C11orf52Q96A22 123 aa6.15□□□□□ -1.42
NEDD9-211ENST00000508546 NKX6-2Q9C056 277 aaPredicted RBP6.15□□□□□ -1.42
NEDD9-211ENST00000508546 GTSF1LQ9H1H1 148 aa6.15□□□□□ -1.42
NEDD9-211ENST00000508546 COX11Q9Y6N1 276 aa6.15□□□□□ -1.42
NEDD9-211ENST00000508546 IGHV3-16A0A0C4DH30 117 aa6.14□□□□□ -1.43
NEDD9-211ENST00000508546 TRBV6-4A0A1B0GX49 114 aa6.14□□□□□ -1.43
NEDD9-211ENST00000508546 ZNF727A8MUV8 499 aa6.14□□□□□ -1.43
NEDD9-211ENST00000508546 CIDEAO60543 219 aa6.14□□□□□ -1.43
NEDD9-211ENST00000508546 GAS8-AS1O95177 125 aa6.14□□□□□ -1.43
NEDD9-211ENST00000508546 MT1HL1P0DM35 61 aa6.14□□□□□ -1.43
NEDD9-211ENST00000508546 PNRC1Q12796 327 aaPredicted RBP6.14□□□□□ -1.43
NEDD9-211ENST00000508546 RHOHQ15669 191 aa6.14□□□□□ -1.43
NEDD9-211ENST00000508546 FAM74A3Q4VXF1 159 aa6.14□□□□□ -1.43
NEDD9-211ENST00000508546 ATRAIDQ6UW56 229 aa6.14□□□□□ -1.43
NEDD9-211ENST00000508546 Q8N976 141 aa6.14□□□□□ -1.43
NEDD9-211ENST00000508546 CLRN3Q8NCR9 226 aa6.14□□□□□ -1.43
NEDD9-211ENST00000508546 TCEAL7Q9BRU2 100 aa6.14□□□□□ -1.43
NEDD9-211ENST00000508546 PRADC1Q9BSG0 188 aa6.14□□□□□ -1.43
NEDD9-211ENST00000508546 FBLL1A6NHQ2 334 aaKnown RBP6.13□□□□□ -1.43
NEDD9-211ENST00000508546 IGLV2-11P01706 119 aa6.13□□□□□ -1.43
NEDD9-211ENST00000508546 CSN1S1P47710 185 aa6.13□□□□□ -1.43
NEDD9-211ENST00000508546 RANP62826 216 aaKnown RBP6.13□□□□□ -1.43
NEDD9-211ENST00000508546 RHEBQ15382 184 aa6.13□□□□□ -1.43
NEDD9-211ENST00000508546 ATP6V0E2Q8NHE4 81 aa6.13□□□□□ -1.43
NEDD9-211ENST00000508546 BAALCQ8WXS3 180 aa6.13□□□□□ -1.43
NEDD9-211ENST00000508546 TVP23CQ96ET8 276 aa6.13□□□□□ -1.43
NEDD9-211ENST00000508546 DERL1Q9BUN8 251 aa6.13□□□□□ -1.43
NEDD9-211ENST00000508546 NAT8Q9UHE5 227 aa6.13□□□□□ -1.43
NEDD9-211ENST00000508546 GNRH2O43555 120 aa6.12□□□□□ -1.43
NEDD9-211ENST00000508546 AKR1C3P42330 323 aa6.12□□□□□ -1.43
NEDD9-211ENST00000508546 HNRNPA3P51991 378 aaKnown RBP6.12□□□□□ -1.43
NEDD9-211ENST00000508546 RPL37AP61513 92 aaKnown RBP6.12□□□□□ -1.43
NEDD9-211ENST00000508546 SUMO1P63165 101 aaKnown RBP6.12□□□□□ -1.43
NEDD9-211ENST00000508546 Q8N3U1 123 aa6.12□□□□□ -1.43
NEDD9-211ENST00000508546 C5orf17Q8NAS9 161 aa6.12□□□□□ -1.43
NEDD9-211ENST00000508546 DAZAP1Q96EP5 407 aaKnown RBP6.12□□□□□ -1.43
NEDD9-211ENST00000508546 OTORQ9NRC9 128 aa6.12□□□□□ -1.43
NEDD9-211ENST00000508546 TRBV20OR9-2A0A075B6H5 130 aa6.11□□□□□ -1.43
NEDD9-211ENST00000508546 C7orf77A4D0Y5 90 aa6.11□□□□□ -1.43
NEDD9-211ENST00000508546 PEX7O00628 323 aa6.11□□□□□ -1.43
NEDD9-211ENST00000508546 TYMSP04818 313 aa6.11□□□□□ -1.43
NEDD9-211ENST00000508546 RPL35P42766 123 aaKnown RBP6.11□□□□□ -1.43
NEDD9-211ENST00000508546 ADIRFQ15847 76 aa6.11□□□□□ -1.43
NEDD9-211ENST00000508546 TMEM241Q24JQ0 296 aa6.11□□□□□ -1.43
NEDD9-211ENST00000508546 CFAP126Q5VTH2 177 aa6.11□□□□□ -1.43
NEDD9-211ENST00000508546 DAZ4Q86SG3 579 aaKnown RBP6.11□□□□□ -1.43
NEDD9-211ENST00000508546 HIST1H2BAQ96A08 127 aa6.11□□□□□ -1.43
NEDD9-211ENST00000508546 RMI2Q96E14 147 aa6.11□□□□□ -1.43
NEDD9-211ENST00000508546 SDF2L1Q9HCN8 221 aa6.11□□□□□ -1.43
NEDD9-211ENST00000508546 RPS10P5Q9NQ39 176 aa6.11□□□□□ -1.43
NEDD9-211ENST00000508546 DAZ3Q9NR90 486 aaKnown RBP6.11□□□□□ -1.43
NEDD9-211ENST00000508546 NAGKQ9UJ70 344 aa6.11□□□□□ -1.43
NEDD9-211ENST00000508546 TRAV8-1A0A0A6YYK1 113 aa6.1□□□□□ -1.43
NEDD9-211ENST00000508546 TRAV21A0A0B4J279 112 aa6.1□□□□□ -1.43
NEDD9-211ENST00000508546 PGPA6NDG6 321 aa6.1□□□□□ -1.43
NEDD9-211ENST00000508546 B4DEV8 164 aa6.1□□□□□ -1.43
NEDD9-211ENST00000508546 DIRC3C9JPN6 131 aa6.1□□□□□ -1.43
NEDD9-211ENST00000508546 MGST1P10620 155 aaKnown RBP6.1□□□□□ -1.43
NEDD9-211ENST00000508546 GNG4P50150 75 aa6.1□□□□□ -1.43
NEDD9-211ENST00000508546 RPL23P62829 140 aaKnown RBP6.1□□□□□ -1.43
NEDD9-211ENST00000508546 GNG5P63218 68 aa6.1□□□□□ -1.43
NEDD9-211ENST00000508546 CENPWQ5EE01 88 aa6.1□□□□□ -1.43
NEDD9-211ENST00000508546 CBLN2Q8IUK8 224 aa6.1□□□□□ -1.43
NEDD9-211ENST00000508546 CMTM2Q8TAZ6 248 aa6.1□□□□□ -1.43
NEDD9-211ENST00000508546 KCNS1Q96KK3 526 aa6.1□□□□□ -1.43
NEDD9-211ENST00000508546 EPDR1Q9UM22 224 aa6.1□□□□□ -1.43
NEDD9-211ENST00000508546 RPH3ALQ9UNE2 315 aa6.1□□□□□ -1.43
NEDD9-211ENST00000508546 MUC2Q02817 5179 aa6.09□□□□□ -1.43
NEDD9-211ENST00000508546 A0A087WWC5 75 aa6.09□□□□□ -1.43
NEDD9-211ENST00000508546 PGPEP1LA6NFU8 196 aa6.09□□□□□ -1.43
NEDD9-211ENST00000508546 TCRAP04437 139 aa6.09□□□□□ -1.43
NEDD9-211ENST00000508546 LINC00694P0DN24 101 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms