RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 COL5A1-AS1Q5SY13 56 aa12.72□□□□□ -0.37
TRAPPC11-204ENST00000505676 RPL39LQ96EH5 51 aaKnown RBP12.72□□□□□ -0.37
TRAPPC11-204ENST00000505676 MAP1AP78559 2803 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC11-204ENST00000505676 A0A1W2PRX2 142 aa12.71□□□□□ -0.37
TRAPPC11-204ENST00000505676 PROK1P58294 105 aa12.71□□□□□ -0.37
TRAPPC11-204ENST00000505676 NUTF2P61970 127 aaKnown RBP12.71□□□□□ -0.37
TRAPPC11-204ENST00000505676 TRPT1Q86TN4 253 aaKnown RBP12.71□□□□□ -0.37
TRAPPC11-204ENST00000505676 C18orf15Q96N68 181 aa12.71□□□□□ -0.37
TRAPPC11-204ENST00000505676 KIR2DL4Q99706 377 aa12.71□□□□□ -0.37
TRAPPC11-204ENST00000505676 SPXQ9BT56 116 aa12.71□□□□□ -0.37
TRAPPC11-204ENST00000505676 TENM4Q6N022 2769 aa12.71□□□□□ -0.37
TRAPPC11-204ENST00000505676 OR11H12B2RN74 326 aa12.7□□□□□ -0.38
TRAPPC11-204ENST00000505676 DLEU1O43261 78 aa12.7□□□□□ -0.38
TRAPPC11-204ENST00000505676 POLR2KP53803 58 aaKnown RBP12.7□□□□□ -0.38
TRAPPC11-204ENST00000505676 CSTL1Q9H114 145 aa12.7□□□□□ -0.38
TRAPPC11-204ENST00000505676 RBMY1BA6NDE4 496 aaKnown RBP12.7□□□□□ -0.38
TRAPPC11-204ENST00000505676 RBMY1EA6NEQ0 496 aaKnown RBP12.7□□□□□ -0.38
TRAPPC11-204ENST00000505676 A8MWV9 139 aa12.7□□□□□ -0.38
TRAPPC11-204ENST00000505676 F5H697 171 aa12.7□□□□□ -0.38
TRAPPC11-204ENST00000505676 CRYGDP07320 174 aa12.7□□□□□ -0.38
TRAPPC11-204ENST00000505676 RBMY1DP0C7P1 496 aaKnown RBP12.7□□□□□ -0.38
TRAPPC11-204ENST00000505676 ZNF876PQ49A33 203 aa12.7□□□□□ -0.38
TRAPPC11-204ENST00000505676 MCRIP2Q9BUT9 160 aaKnown RBP12.7□□□□□ -0.38
TRAPPC11-204ENST00000505676 PDZD2O15018 2839 aa12.7□□□□□ -0.38
TRAPPC11-204ENST00000505676 M0R2P5 195 aa12.69□□□□□ -0.38
TRAPPC11-204ENST00000505676 SPRY2O43597 315 aa12.69□□□□□ -0.38
TRAPPC11-204ENST00000505676 DPM2O94777 84 aa12.69□□□□□ -0.38
TRAPPC11-204ENST00000505676 STHQ8IWL8 128 aa12.69□□□□□ -0.38
TRAPPC11-204ENST00000505676 TRBV27A0A0K0K1C4 114 aa12.69□□□□□ -0.38
TRAPPC11-204ENST00000505676 IGKCP01834 107 aa12.69□□□□□ -0.38
TRAPPC11-204ENST00000505676 PLNP26678 52 aa12.69□□□□□ -0.38
TRAPPC11-204ENST00000505676 ODF3L2Q3SX64 289 aa12.69□□□□□ -0.38
TRAPPC11-204ENST00000505676 NDUFA11Q86Y39 141 aa12.69□□□□□ -0.38
TRAPPC11-204ENST00000505676 MXRA5Q9NR99 2828 aa12.69□□□□□ -0.38
TRAPPC11-204ENST00000505676 A0A087WX48 190 aa12.68□□□□□ -0.38
TRAPPC11-204ENST00000505676 LY6G6DO95868 133 aa12.68□□□□□ -0.38
TRAPPC11-204ENST00000505676 ZNF56Q15929 161 aa12.68□□□□□ -0.38
TRAPPC11-204ENST00000505676 SCGB3A1Q96QR1 104 aa12.68□□□□□ -0.38
TRAPPC11-204ENST00000505676 A0A087WWL8 130 aa12.68□□□□□ -0.38
TRAPPC11-204ENST00000505676 A0A1B0GV90 55 aa12.68□□□□□ -0.38
TRAPPC11-204ENST00000505676 RBMY1A1P0DJD3 496 aaKnown RBP12.68□□□□□ -0.38
TRAPPC11-204ENST00000505676 RBMY1CP0DJD4 496 aa12.68□□□□□ -0.38
TRAPPC11-204ENST00000505676 FOSL1P15407 271 aa12.68□□□□□ -0.38
TRAPPC11-204ENST00000505676 RBMY1FQ15415 496 aaKnown RBP12.68□□□□□ -0.38
TRAPPC11-204ENST00000505676 C12orf54Q6X4T0 127 aa12.68□□□□□ -0.38
TRAPPC11-204ENST00000505676 C11orf44Q8N8P7 122 aa12.68□□□□□ -0.38
TRAPPC11-204ENST00000505676 CYSLTR1Q9Y271 337 aa12.68□□□□□ -0.38
TRAPPC11-204ENST00000505676 MUC4Q99102 2169 aa12.67□□□□□ -0.38
TRAPPC11-204ENST00000505676 M0QY20 66 aa12.67□□□□□ -0.38
TRAPPC11-204ENST00000505676 SIVA1O15304 175 aa12.67□□□□□ -0.38
TRAPPC11-204ENST00000505676 RHOHQ15669 191 aa12.67□□□□□ -0.38
TRAPPC11-204ENST00000505676 C2orf66Q6UXQ4 117 aa12.67□□□□□ -0.38
TRAPPC11-204ENST00000505676 ERASQ7Z444 233 aa12.67□□□□□ -0.38
TRAPPC11-204ENST00000505676 FLNAP21333 2647 aaKnown RBP12.67□□□□□ -0.38
TRAPPC11-204ENST00000505676 RHODO00212 210 aa12.66□□□□□ -0.38
TRAPPC11-204ENST00000505676 JPT2Q9H910 190 aa12.66□□□□□ -0.38
TRAPPC11-204ENST00000505676 IGLV1-51P01701 117 aa12.66□□□□□ -0.38
TRAPPC11-204ENST00000505676 FAM74A4Q5TZK3 123 aa12.66□□□□□ -0.38
TRAPPC11-204ENST00000505676 LINC01587Q99440 93 aa12.66□□□□□ -0.38
TRAPPC11-204ENST00000505676 DKK2Q9UBU2 259 aa12.66□□□□□ -0.38
TRAPPC11-204ENST00000505676 CCDC168Q8NDH2 2452 aa12.66□□□□□ -0.38
TRAPPC11-204ENST00000505676 SDHAF1A6NFY7 115 aa12.65□□□□□ -0.38
TRAPPC11-204ENST00000505676 RIPPLY3P57055 190 aa12.65□□□□□ -0.38
TRAPPC11-204ENST00000505676 TMEM141Q96I45 108 aa12.65□□□□□ -0.38
TRAPPC11-204ENST00000505676 SAP30O75446 220 aa12.65□□□□□ -0.38
TRAPPC11-204ENST00000505676 BOD1L2Q8IYS8 172 aa12.65□□□□□ -0.38
TRAPPC11-204ENST00000505676 ADARB2-AS1A8MUL3 147 aa12.64□□□□□ -0.39
TRAPPC11-204ENST00000505676 F8VRH5 84 aa12.64□□□□□ -0.39
TRAPPC11-204ENST00000505676 ANKRD39Q53RE8 183 aa12.64□□□□□ -0.39
TRAPPC11-204ENST00000505676 BATFQ16520 125 aa12.64□□□□□ -0.39
TRAPPC11-204ENST00000505676 ZFP2Q6ZN57 461 aa12.64□□□□□ -0.39
TRAPPC11-204ENST00000505676 TIMM17AQ99595 171 aa12.64□□□□□ -0.39
TRAPPC11-204ENST00000505676 ZNF124Q15973 351 aa12.63□□□□□ -0.39
TRAPPC11-204ENST00000505676 NSUN5P1Q3KNT7 163 aa12.63□□□□□ -0.39
TRAPPC11-204ENST00000505676 HHLA3Q9XRX5 114 aa12.63□□□□□ -0.39
TRAPPC11-204ENST00000505676 BEAN1Q3B7T3 259 aa12.62□□□□□ -0.39
TRAPPC11-204ENST00000505676 PAPPA-AS1Q5QFB9 102 aa12.62□□□□□ -0.39
TRAPPC11-204ENST00000505676 NEXN-AS1Q8NBZ9 246 aa12.62□□□□□ -0.39
TRAPPC11-204ENST00000505676 HELZ2Q9BYK8 2649 aaKnown RBP12.62□□□□□ -0.39
TRAPPC11-204ENST00000505676 UNC79Q9P2D8 2635 aa12.62□□□□□ -0.39
TRAPPC11-204ENST00000505676 MYO9AB2RTY4 2548 aa12.62□□□□□ -0.39
TRAPPC11-204ENST00000505676 FGF6P10767 208 aa12.62□□□□□ -0.39
TRAPPC11-204ENST00000505676 C11orf72Q8NBR9 251 aa12.62□□□□□ -0.39
TRAPPC11-204ENST00000505676 STPG4Q8N801 248 aa12.61□□□□□ -0.39
TRAPPC11-204ENST00000505676 TLN2Q9Y4G6 2542 aa12.61□□□□□ -0.39
TRAPPC11-204ENST00000505676 I3L3M4 83 aa12.61□□□□□ -0.39
TRAPPC11-204ENST00000505676 C1QTNF4Q9BXJ3 329 aa12.61□□□□□ -0.39
TRAPPC11-204ENST00000505676 MRPL35Q9NZE8 188 aaKnown RBP12.61□□□□□ -0.39
TRAPPC11-204ENST00000505676 CHTOPQ9Y3Y2 248 aaKnown RBP12.61□□□□□ -0.39
TRAPPC11-204ENST00000505676 UFSP1Q6NVU6 142 aa12.6□□□□□ -0.39
TRAPPC11-204ENST00000505676 MORN3Q6PF18 240 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC11-204ENST00000505676 DNAJC30Q96LL9 226 aa12.6□□□□□ -0.39
TRAPPC11-204ENST00000505676 SMR3AQ99954 134 aa12.6□□□□□ -0.39
TRAPPC11-204ENST00000505676 TMEM208Q9BTX3 173 aa12.6□□□□□ -0.39
TRAPPC11-204ENST00000505676 AGRNO00468 2067 aa12.6□□□□□ -0.39
TRAPPC11-204ENST00000505676 SONP18583 2426 aaKnown RBP12.6□□□□□ -0.39
TRAPPC11-204ENST00000505676 HINT1P49773 126 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC11-204ENST00000505676 BAALCQ8WXS3 180 aa12.6□□□□□ -0.39
TRAPPC11-204ENST00000505676 HTN1P15515 57 aa12.59□□□□□ -0.39
TRAPPC11-204ENST00000505676 TMEM97Q5BJF2 176 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms