RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 FAM213BQ8TBF2 198 aa1.81□□□□□ -2.12
HMGB1P22-201ENST00000505315 TSLPQ969D9 159 aa1.81□□□□□ -2.12
HMGB1P22-201ENST00000505315 MGST2Q99735 147 aa1.81□□□□□ -2.12
HMGB1P22-201ENST00000505315 MED9Q9NWA0 146 aa1.81□□□□□ -2.12
HMGB1P22-201ENST00000505315 ABCC5O15440 1437 aa1.81□□□□□ -2.12
HMGB1P22-201ENST00000505315 CDK12Q9NYV4 1490 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P22-201ENST00000505315 AKAP12Q02952 1782 aa1.8□□□□□ -2.12
HMGB1P22-201ENST00000505315 TEX49A0A1B0GTD5 131 aa1.8□□□□□ -2.12
HMGB1P22-201ENST00000505315 FXYD1O00168 92 aa1.8□□□□□ -2.12
HMGB1P22-201ENST00000505315 UBE2D1P51668 147 aa1.8□□□□□ -2.12
HMGB1P22-201ENST00000505315 SSBP1Q04837 148 aaKnown RBP1.8□□□□□ -2.12
HMGB1P22-201ENST00000505315 PEA15Q15121 130 aa1.8□□□□□ -2.12
HMGB1P22-201ENST00000505315 PPP1R1CQ8WVI7 109 aa1.8□□□□□ -2.12
HMGB1P22-201ENST00000505315 ZNF625Q96I27 306 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P22-201ENST00000505315 KRTAP4-5Q9BYR2 181 aa1.8□□□□□ -2.12
HMGB1P22-201ENST00000505315 UQCR10Q9UDW1 63 aa1.8□□□□□ -2.12
HMGB1P22-201ENST00000505315 CASKIN1Q8WXD9 1431 aa1.8□□□□□ -2.12
HMGB1P22-201ENST00000505315 GOLGA3Q08378 1498 aa1.8□□□□□ -2.12
HMGB1P22-201ENST00000505315 NUMA1Q14980 2115 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 TRBV7-1A0A0A6YYK4 115 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 INE1O15225 51 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 MRPS14O60783 128 aaKnown RBP1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 GYPAP02724 150 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 ASIPP42127 132 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 FXYD4P59646 89 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 KRTAP12-2P59991 146 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 KRTAP10-3P60369 221 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 Q0VG73 95 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 PYY3Q5JQD4 70 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 FAM74A4Q5TZK3 123 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 GDF5OSQ5U4N7 250 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 NPVFQ9HCQ7 196 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 ANKRD36BQ8N2N9 1353 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 ADGRL2O95490 1459 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 CC2D2AQ9P2K1 1620 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 KIAA1549LQ6ZVL6 1849 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 CITO14578 2027 aa1.79□□□□□ -2.12
HMGB1P22-201ENST00000505315 MPDZO75970 2070 aa1.78□□□□□ -2.12
HMGB1P22-201ENST00000505315 ANK1P16157 1881 aa1.78□□□□□ -2.12
HMGB1P22-201ENST00000505315 SPHKAPQ2M3C7 1700 aa1.78□□□□□ -2.12
HMGB1P22-201ENST00000505315 TROQ12816 1431 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P22-201ENST00000505315 IGKV2-29A2NJV5 120 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P22-201ENST00000505315 CHKB-CPT1BH3BT56 60 aa1.78□□□□□ -2.12
HMGB1P22-201ENST00000505315 HCRTO43612 131 aa1.78□□□□□ -2.12
HMGB1P22-201ENST00000505315 TRAPPC2P0DI81 140 aa1.78□□□□□ -2.12
HMGB1P22-201ENST00000505315 TRAPPC2BP0DI82 140 aa1.78□□□□□ -2.12
HMGB1P22-201ENST00000505315 EDDM3BP56851 147 aa1.78□□□□□ -2.12
HMGB1P22-201ENST00000505315 LCE3EQ5T5B0 92 aa1.78□□□□□ -2.12
HMGB1P22-201ENST00000505315 SFTA2Q6UW10 78 aa1.78□□□□□ -2.12
HMGB1P22-201ENST00000505315 AMELYQ99218 206 aa1.78□□□□□ -2.12
HMGB1P22-201ENST00000505315 BRWD1Q9NSI6 2320 aa1.78□□□□□ -2.13
HMGB1P22-201ENST00000505315 HEATR1Q9H583 2144 aaKnown RBP1.78□□□□□ -2.13
HMGB1P22-201ENST00000505315 ALPK3Q96L96 1907 aa1.78□□□□□ -2.13
HMGB1P22-201ENST00000505315 AKAP11Q9UKA4 1901 aa1.78□□□□□ -2.13
HMGB1P22-201ENST00000505315 TRPM7Q96QT4 1865 aa1.77□□□□□ -2.13
HMGB1P22-201ENST00000505315 LAMB2P55268 1798 aa1.77□□□□□ -2.13
HMGB1P22-201ENST00000505315 COL4A5P29400 1685 aa1.77□□□□□ -2.13
HMGB1P22-201ENST00000505315 ROBO1Q9Y6N7 1651 aa1.77□□□□□ -2.13
HMGB1P22-201ENST00000505315 GAPVD1Q14C86 1478 aa1.77□□□□□ -2.13
HMGB1P22-201ENST00000505315 NOTCH3Q9UM47 2321 aa1.77□□□□□ -2.13
HMGB1P22-201ENST00000505315 TRBV7-3A0A075B6L6 115 aa1.77□□□□□ -2.13
HMGB1P22-201ENST00000505315 SFT2D2O95562 160 aa1.77□□□□□ -2.13
HMGB1P22-201ENST00000505315 PPP1R17O96001 155 aa1.77□□□□□ -2.13
HMGB1P22-201ENST00000505315 CYB5AP00167 134 aa1.77□□□□□ -2.13
HMGB1P22-201ENST00000505315 APOC3P02656 99 aa1.77□□□□□ -2.13
HMGB1P22-201ENST00000505315 KRTAP10-6P60371 365 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P22-201ENST00000505315 Q86TA4 180 aa1.77□□□□□ -2.13
HMGB1P22-201ENST00000505315 PRDM2Q13029 1718 aa1.77□□□□□ -2.13
HMGB1P22-201ENST00000505315 ARAP2Q8WZ64 1704 aa1.77□□□□□ -2.13
HMGB1P22-201ENST00000505315 UQCRHLA0A096LP55 91 aa1.76□□□□□ -2.13
HMGB1P22-201ENST00000505315 IGKV3D-7A0A0C4DH55 119 aa1.76□□□□□ -2.13
HMGB1P22-201ENST00000505315 IGKV3OR2-268A0A0C4DH90 116 aa1.76□□□□□ -2.13
HMGB1P22-201ENST00000505315 SPRR5A0A1B0GTR4 108 aa1.76□□□□□ -2.13
HMGB1P22-201ENST00000505315 K7EP34 96 aa1.76□□□□□ -2.13
HMGB1P22-201ENST00000505315 M0R2N4 97 aa1.76□□□□□ -2.13
HMGB1P22-201ENST00000505315 NDUFC1O43677 76 aa1.76□□□□□ -2.13
HMGB1P22-201ENST00000505315 FXYD3Q14802 87 aa1.76□□□□□ -2.13
HMGB1P22-201ENST00000505315 COX7B2Q8TF08 81 aa1.76□□□□□ -2.13
HMGB1P22-201ENST00000505315 LCN9Q8WX39 176 aa1.76□□□□□ -2.13
HMGB1P22-201ENST00000505315 BAZ2BQ9UIF8 2168 aaKnown RBP1.76□□□□□ -2.13
HMGB1P22-201ENST00000505315 MCM3APO60318 1980 aa1.76□□□□□ -2.13
HMGB1P22-201ENST00000505315 MAGI1Q96QZ7 1491 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P22-201ENST00000505315 DOCK10Q96BY6 2186 aa1.75□□□□□ -2.13
HMGB1P22-201ENST00000505315 LOC110117498A0A087WWA1 95 aa1.75□□□□□ -2.13
HMGB1P22-201ENST00000505315 A0A0G2JND7 137 aa1.75□□□□□ -2.13
HMGB1P22-201ENST00000505315 DEFB103AP81534 67 aa1.75□□□□□ -2.13
HMGB1P22-201ENST00000505315 ZNF56Q15929 161 aa1.75□□□□□ -2.13
HMGB1P22-201ENST00000505315 XAF1Q6GPH4 301 aa1.75□□□□□ -2.13
HMGB1P22-201ENST00000505315 OBSCN-AS1Q96MR7 158 aa1.75□□□□□ -2.13
HMGB1P22-201ENST00000505315 KRTAP4-2Q9BYR5 136 aa1.75□□□□□ -2.13
HMGB1P22-201ENST00000505315 DYNLRB1Q9NP97 96 aa1.75□□□□□ -2.13
HMGB1P22-201ENST00000505315 PRO1854Q9UHT4 67 aa1.75□□□□□ -2.13
HMGB1P22-201ENST00000505315 V9GYV3 84 aa1.75□□□□□ -2.13
HMGB1P22-201ENST00000505315 LTBP2Q14767 1821 aa1.75□□□□□ -2.13
HMGB1P22-201ENST00000505315 MYOFQ9NZM1 2061 aa1.75□□□□□ -2.13
HMGB1P22-201ENST00000505315 EML5Q05BV3 1969 aa1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 UNC13CQ8NB66 2214 aa1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 IGKV2-40A0A087WW87 121 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 A0A1W2PPM0 123 aa1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 H3BQF6 201 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms