RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 NEGR1Q7Z3B1 354 aa11.59□□□□□ -0.55
PRKCB-210ENST00000498739 LINC01551Q86U37 167 aa11.59□□□□□ -0.55
PRKCB-210ENST00000498739 M0R2N4 97 aa11.58□□□□□ -0.56
PRKCB-210ENST00000498739 GATCO43716 136 aaKnown RBP11.58□□□□□ -0.56
PRKCB-210ENST00000498739 CRYGDP07320 174 aa11.58□□□□□ -0.56
PRKCB-210ENST00000498739 ERVFC1-1P60608 527 aa11.58□□□□□ -0.56
PRKCB-210ENST00000498739 FAM74A3Q4VXF1 159 aa11.58□□□□□ -0.56
PRKCB-210ENST00000498739 Q6ZSN1 163 aa11.58□□□□□ -0.56
PRKCB-210ENST00000498739 FAM231DQ6ZW35 169 aa11.58□□□□□ -0.56
PRKCB-210ENST00000498739 ZNRF2Q8NHG8 242 aa11.58□□□□□ -0.56
PRKCB-210ENST00000498739 NACAE9PAV3 2078 aa11.57□□□□□ -0.56
PRKCB-210ENST00000498739 TMEM241Q24JQ0 296 aa11.57□□□□□ -0.56
PRKCB-210ENST00000498739 CLLU1Q5K131 121 aa11.57□□□□□ -0.56
PRKCB-210ENST00000498739 MRPS16Q9Y3D3 137 aaKnown RBP11.57□□□□□ -0.56
PRKCB-210ENST00000498739 A0A1W2PPQ1 181 aa11.56□□□□□ -0.56
PRKCB-210ENST00000498739 F2Z2F3 143 aa11.56□□□□□ -0.56
PRKCB-210ENST00000498739 CACNG7P62955 275 aa11.56□□□□□ -0.56
PRKCB-210ENST00000498739 LYPD5Q6UWN5 251 aa11.56□□□□□ -0.56
PRKCB-210ENST00000498739 LYZL1Q6UWQ5 148 aa11.56□□□□□ -0.56
PRKCB-210ENST00000498739 ZNF56Q15929 161 aa11.55□□□□□ -0.56
PRKCB-210ENST00000498739 C14orf178Q8N769 122 aaPredicted RBP11.55□□□□□ -0.56
PRKCB-210ENST00000498739 AP1S3Q96PC3 154 aa11.55□□□□□ -0.56
PRKCB-210ENST00000498739 UPK3BQ9BT76 320 aa11.55□□□□□ -0.56
PRKCB-210ENST00000498739 NAT8Q9UHE5 227 aa11.55□□□□□ -0.56
PRKCB-210ENST00000498739 GAGE12JA6NER3 117 aa11.54□□□□□ -0.56
PRKCB-210ENST00000498739 SMIM17P0DL12 118 aa11.54□□□□□ -0.56
PRKCB-210ENST00000498739 RPL23P62829 140 aaKnown RBP11.54□□□□□ -0.56
PRKCB-210ENST00000498739 GAGE1Q13065 139 aa11.54□□□□□ -0.56
PRKCB-210ENST00000498739 GAGE4Q13068 117 aa11.54□□□□□ -0.56
PRKCB-210ENST00000498739 GAGE5Q13069 117 aa11.54□□□□□ -0.56
PRKCB-210ENST00000498739 ADIRFQ15847 76 aa11.54□□□□□ -0.56
PRKCB-210ENST00000498739 GAGE13Q4V321 117 aa11.54□□□□□ -0.56
PRKCB-210ENST00000498739 SOHLH1Q5JUK2 328 aa11.54□□□□□ -0.56
PRKCB-210ENST00000498739 SH2D6Q7Z4S9 175 aa11.54□□□□□ -0.56
PRKCB-210ENST00000498739 Q9H8V8 135 aa11.54□□□□□ -0.56
PRKCB-210ENST00000498739 MSRB1Q9NZV6 116 aa11.54□□□□□ -0.56
PRKCB-210ENST00000498739 DNAH6Q9C0G6 4158 aa11.54□□□□□ -0.56
PRKCB-210ENST00000498739 KMT2AQ03164 3969 aa11.53□□□□□ -0.56
PRKCB-210ENST00000498739 A8MWL6 223 aa11.53□□□□□ -0.56
PRKCB-210ENST00000498739 CTRLP40313 264 aa11.53□□□□□ -0.56
PRKCB-210ENST00000498739 CT83Q5H943 113 aa11.53□□□□□ -0.56
PRKCB-210ENST00000498739 GTSF1Q8WW33 167 aa11.53□□□□□ -0.56
PRKCB-210ENST00000498739 ISOC2Q96AB3 205 aa11.53□□□□□ -0.56
PRKCB-210ENST00000498739 OSTCQ9NRP0 149 aa11.53□□□□□ -0.56
PRKCB-210ENST00000498739 NTF3P20783 257 aa11.52□□□□□ -0.57
PRKCB-210ENST00000498739 C15orf54Q8N8G6 183 aa11.52□□□□□ -0.57
PRKCB-210ENST00000498739 Q9UF83 564 aa11.52□□□□□ -0.57
PRKCB-210ENST00000498739 NBDYA0A0U1RRE5 68 aa11.51□□□□□ -0.57
PRKCB-210ENST00000498739 F5H697 171 aa11.51□□□□□ -0.57
PRKCB-210ENST00000498739 RAB4BP61018 213 aa11.51□□□□□ -0.57
PRKCB-210ENST00000498739 Q6ZR54 194 aa11.51□□□□□ -0.57
PRKCB-210ENST00000498739 ATP6V0E2Q8NHE4 81 aa11.51□□□□□ -0.57
PRKCB-210ENST00000498739 KIF25-AS1Q9Y6Z4 181 aa11.51□□□□□ -0.57
PRKCB-210ENST00000498739 MGPP08493 103 aa11.5□□□□□ -0.57
PRKCB-210ENST00000498739 TRGC1P0CF51 173 aa11.5□□□□□ -0.57
PRKCB-210ENST00000498739 TWIST1Q15672 202 aa11.5□□□□□ -0.57
PRKCB-210ENST00000498739 WDR73Q6P4I2 378 aa11.5□□□□□ -0.57
PRKCB-210ENST00000498739 PGLYRP4Q96LB8 373 aa11.5□□□□□ -0.57
PRKCB-210ENST00000498739 CNFNQ9BYD5 112 aa11.5□□□□□ -0.57
PRKCB-210ENST00000498739 SIVA1O15304 175 aa11.49□□□□□ -0.57
PRKCB-210ENST00000498739 LINC00694P0DN24 101 aa11.49□□□□□ -0.57
PRKCB-210ENST00000498739 EVI2AP22794 236 aa11.49□□□□□ -0.57
PRKCB-210ENST00000498739 OR10G8Q8NGN5 311 aa11.49□□□□□ -0.57
PRKCB-210ENST00000498739 TSKUQ8WUA8 353 aa11.49□□□□□ -0.57
PRKCB-210ENST00000498739 V9GYV3 84 aa11.49□□□□□ -0.57
PRKCB-210ENST00000498739 TRBV10-1A0A0K0K1A3 114 aa11.48□□□□□ -0.57
PRKCB-210ENST00000498739 TIRAPP58753 221 aa11.48□□□□□ -0.57
PRKCB-210ENST00000498739 LINC00315P59091 139 aa11.48□□□□□ -0.57
PRKCB-210ENST00000498739 RPL36AP83881 106 aaKnown RBP11.48□□□□□ -0.57
PRKCB-210ENST00000498739 WFDC10BQ8IUB3 73 aa11.48□□□□□ -0.57
PRKCB-210ENST00000498739 RPL36ALQ969Q0 106 aaKnown RBP11.48□□□□□ -0.57
PRKCB-210ENST00000498739 BORCS7Q96B45 105 aa11.48□□□□□ -0.57
PRKCB-210ENST00000498739 GFRA4Q9GZZ7 299 aa11.48□□□□□ -0.57
PRKCB-210ENST00000498739 GTSF1LQ9H1H1 148 aa11.48□□□□□ -0.57
PRKCB-210ENST00000498739 DPH3P1Q9H4G8 78 aa11.48□□□□□ -0.57
PRKCB-210ENST00000498739 HIGD1CA8MV81 97 aa11.47□□□□□ -0.57
PRKCB-210ENST00000498739 FOXA3P55318 350 aaPredicted RBP11.47□□□□□ -0.57
PRKCB-210ENST00000498739 TTC32Q5I0X7 151 aa11.47□□□□□ -0.57
PRKCB-210ENST00000498739 OR10J3Q5JRS4 329 aa11.46□□□□□ -0.57
PRKCB-210ENST00000498739 NEXN-AS1Q8NBZ9 246 aa11.46□□□□□ -0.57
PRKCB-210ENST00000498739 TRBV7-3A0A075B6L6 115 aa11.45□□□□□ -0.58
PRKCB-210ENST00000498739 FAM231BA6NCW3 169 aa11.45□□□□□ -0.58
PRKCB-210ENST00000498739 LELP1Q5T871 98 aa11.45□□□□□ -0.58
PRKCB-210ENST00000498739 SMIM15Q7Z3B0 74 aa11.45□□□□□ -0.58
PRKCB-210ENST00000498739 KRTAP1-5Q9BYS1 174 aa11.45□□□□□ -0.58
PRKCB-210ENST00000498739 TRAV8-6A0A0B4J262 113 aa11.44□□□□□ -0.58
PRKCB-210ENST00000498739 UBE2D3P61077 147 aa11.44□□□□□ -0.58
PRKCB-210ENST00000498739 UBE2D2P62837 147 aa11.44□□□□□ -0.58
PRKCB-210ENST00000498739 C1orf134Q5TEV5 83 aa11.44□□□□□ -0.58
PRKCB-210ENST00000498739 SUMO4Q6EEV6 95 aa11.44□□□□□ -0.58
PRKCB-210ENST00000498739 UQCC3Q6UW78 93 aa11.44□□□□□ -0.58
PRKCB-210ENST00000498739 A0A1B0GUT8 65 aa11.43□□□□□ -0.58
PRKCB-210ENST00000498739 H7C1H1 209 aa11.43□□□□□ -0.58
PRKCB-210ENST00000498739 M0QY20 66 aa11.42□□□□□ -0.58
PRKCB-210ENST00000498739 RTL8CO15255 209 aa11.42□□□□□ -0.58
PRKCB-210ENST00000498739 PNRC1Q12796 327 aaPredicted RBP11.42□□□□□ -0.58
PRKCB-210ENST00000498739 COMMD7Q86VX2 200 aa11.42□□□□□ -0.58
PRKCB-210ENST00000498739 C6orf223Q8N319 242 aa11.42□□□□□ -0.58
PRKCB-210ENST00000498739 NUP35Q8NFH5 326 aa11.42□□□□□ -0.58
PRKCB-210ENST00000498739 NAT8BQ9UHF3 227 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms