RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 BIN3Q9NQY0 253 aa11.42□□□□□ -0.58
ABCF3-218ENST00000498136 TRBV20OR9-2A0A075B6H5 130 aa11.41□□□□□ -0.58
ABCF3-218ENST00000498136 TRAV9-2A0A087WT02 112 aa11.41□□□□□ -0.58
ABCF3-218ENST00000498136 A0A1B0GVY2 172 aa11.41□□□□□ -0.58
ABCF3-218ENST00000498136 P01737 135 aa11.41□□□□□ -0.58
ABCF3-218ENST00000498136 CEBPGP53567 150 aa11.41□□□□□ -0.58
ABCF3-218ENST00000498136 OR10J3Q5JRS4 329 aa11.41□□□□□ -0.58
ABCF3-218ENST00000498136 C14orf178Q8N769 122 aaPredicted RBP11.41□□□□□ -0.58
ABCF3-218ENST00000498136 BIRC6Q9NR09 4857 aa11.4□□□□□ -0.58
ABCF3-218ENST00000498136 HECTD4Q9Y4D8 3996 aa11.4□□□□□ -0.58
ABCF3-218ENST00000498136 FAT2Q9NYQ8 4349 aa11.4□□□□□ -0.58
ABCF3-218ENST00000498136 TRAV8-6A0A0B4J262 113 aa11.4□□□□□ -0.58
ABCF3-218ENST00000498136 SNAI2O43623 268 aa11.4□□□□□ -0.58
ABCF3-218ENST00000498136 CRYGDP07320 174 aa11.4□□□□□ -0.58
ABCF3-218ENST00000498136 OR5AL1P0C617 328 aa11.4□□□□□ -0.58
ABCF3-218ENST00000498136 GZMBP10144 247 aa11.4□□□□□ -0.58
ABCF3-218ENST00000498136 EVI2AP22794 236 aa11.4□□□□□ -0.58
ABCF3-218ENST00000498136 RPS20P60866 119 aaKnown RBP11.4□□□□□ -0.58
ABCF3-218ENST00000498136 TNP2Q05952 138 aa11.4□□□□□ -0.58
ABCF3-218ENST00000498136 TOR2AQ5JU69 321 aa11.4□□□□□ -0.58
ABCF3-218ENST00000498136 LYPD6BQ8NI32 183 aa11.4□□□□□ -0.58
ABCF3-218ENST00000498136 EIF5A2Q9GZV4 153 aaKnown RBP11.4□□□□□ -0.58
ABCF3-218ENST00000498136 XKRY2A2RUG3 117 aa11.39□□□□□ -0.59
ABCF3-218ENST00000498136 C19orf71A6NCJ1 209 aa11.39□□□□□ -0.59
ABCF3-218ENST00000498136 TIRAPP58753 221 aa11.39□□□□□ -0.59
ABCF3-218ENST00000498136 LINC00315P59091 139 aa11.39□□□□□ -0.59
ABCF3-218ENST00000498136 ZNF56Q15929 161 aa11.39□□□□□ -0.59
ABCF3-218ENST00000498136 SSBP4Q9BWG4 385 aaPredicted RBP11.39□□□□□ -0.59
ABCF3-218ENST00000498136 GTSF1LQ9H1H1 148 aa11.39□□□□□ -0.59
ABCF3-218ENST00000498136 DNAH17Q9UFH2 4485 aa11.39□□□□□ -0.59
ABCF3-218ENST00000498136 TMEM250H0YL14 139 aa11.38□□□□□ -0.59
ABCF3-218ENST00000498136 FER1L6-AS1Q8NA97 138 aa11.38□□□□□ -0.59
ABCF3-218ENST00000498136 IGHV3-38A0A0C4DH36 116 aa11.37□□□□□ -0.59
ABCF3-218ENST00000498136 SMIM17P0DL12 118 aa11.37□□□□□ -0.59
ABCF3-218ENST00000498136 BTF3P20290 206 aaKnown RBP11.37□□□□□ -0.59
ABCF3-218ENST00000498136 LELP1Q5T871 98 aa11.37□□□□□ -0.59
ABCF3-218ENST00000498136 Q9UF83 564 aa11.37□□□□□ -0.59
ABCF3-218ENST00000498136 DNAH10OSP0CZ25 163 aa11.36□□□□□ -0.59
ABCF3-218ENST00000498136 NUDT10Q8NFP7 164 aa11.36□□□□□ -0.59
ABCF3-218ENST00000498136 OCC1Q8TAD7 63 aa11.36□□□□□ -0.59
ABCF3-218ENST00000498136 NUDT11Q96G61 164 aa11.36□□□□□ -0.59
ABCF3-218ENST00000498136 AP1S3Q96PC3 154 aa11.36□□□□□ -0.59
ABCF3-218ENST00000498136 F5H697 171 aa11.35□□□□□ -0.59
ABCF3-218ENST00000498136 IGLC6P0CF74 106 aa11.35□□□□□ -0.59
ABCF3-218ENST00000498136 RAB4BP61018 213 aa11.35□□□□□ -0.59
ABCF3-218ENST00000498136 RPL36AP83881 106 aaKnown RBP11.35□□□□□ -0.59
ABCF3-218ENST00000498136 RPL36ALQ969Q0 106 aaKnown RBP11.35□□□□□ -0.59
ABCF3-218ENST00000498136 FAM210AQ96ND0 272 aa11.35□□□□□ -0.59
ABCF3-218ENST00000498136 RNASE7Q9H1E1 156 aaKnown RBP11.35□□□□□ -0.59
ABCF3-218ENST00000498136 TNFRSF18Q9Y5U5 241 aa11.35□□□□□ -0.59
ABCF3-218ENST00000498136 K7EN84 100 aa11.34□□□□□ -0.59
ABCF3-218ENST00000498136 K7EP13 123 aa11.34□□□□□ -0.59
ABCF3-218ENST00000498136 LINC00694P0DN24 101 aa11.34□□□□□ -0.59
ABCF3-218ENST00000498136 NFE4Q86UQ8 179 aa11.34□□□□□ -0.59
ABCF3-218ENST00000498136 C10orf126Q8N4M7 172 aa11.34□□□□□ -0.59
ABCF3-218ENST00000498136 TRBV10-1A0A0K0K1A3 114 aa11.33□□□□□ -0.6
ABCF3-218ENST00000498136 F2Z2F3 143 aa11.33□□□□□ -0.6
ABCF3-218ENST00000498136 IGHV3-30P01768 117 aa11.33□□□□□ -0.6
ABCF3-218ENST00000498136 IGHV3-33P01772 117 aa11.33□□□□□ -0.6
ABCF3-218ENST00000498136 IGHV3-30-3P0DP02 117 aa11.33□□□□□ -0.6
ABCF3-218ENST00000498136 IGHV3-30-5P0DP03 117 aa11.33□□□□□ -0.6
ABCF3-218ENST00000498136 CACNG7P62955 275 aa11.33□□□□□ -0.6
ABCF3-218ENST00000498136 LYZL1Q6UWQ5 148 aa11.33□□□□□ -0.6
ABCF3-218ENST00000498136 SMIM7Q9BQ49 75 aa11.33□□□□□ -0.6
ABCF3-218ENST00000498136 RPP21Q9H633 154 aaKnown RBP11.33□□□□□ -0.6
ABCF3-218ENST00000498136 MSRB1Q9NZV6 116 aa11.33□□□□□ -0.6
ABCF3-218ENST00000498136 MGPP08493 103 aa11.32□□□□□ -0.6
ABCF3-218ENST00000498136 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
ABCF3-218ENST00000498136 TEX261Q6UWH6 196 aa11.32□□□□□ -0.6
ABCF3-218ENST00000498136 PKD1P98161 4303 aa11.32□□□□□ -0.6
ABCF3-218ENST00000498136 TRBV7-3A0A075B6L6 115 aa11.31□□□□□ -0.6
ABCF3-218ENST00000498136 A0A087WWC5 75 aa11.31□□□□□ -0.6
ABCF3-218ENST00000498136 ZNF727A8MUV8 499 aa11.3□□□□□ -0.6
ABCF3-218ENST00000498136 GATCO43716 136 aaKnown RBP11.3□□□□□ -0.6
ABCF3-218ENST00000498136 TRGC1P0CF51 173 aa11.3□□□□□ -0.6
ABCF3-218ENST00000498136 Q6ZRN7 208 aaPredicted RBP11.3□□□□□ -0.6
ABCF3-218ENST00000498136 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.3□□□□□ -0.6
ABCF3-218ENST00000498136 NEXN-AS1Q8NBZ9 246 aa11.3□□□□□ -0.6
ABCF3-218ENST00000498136 NDUFS6O75380 124 aaKnown RBP11.29□□□□□ -0.6
ABCF3-218ENST00000498136 SRP19P09132 144 aaKnown RBP11.29□□□□□ -0.6
ABCF3-218ENST00000498136 NTF3P20783 257 aa11.29□□□□□ -0.6
ABCF3-218ENST00000498136 ERVFC1-1P60608 527 aa11.29□□□□□ -0.6
ABCF3-218ENST00000498136 UBE2D3P61077 147 aa11.29□□□□□ -0.6
ABCF3-218ENST00000498136 UBE2D2P62837 147 aa11.29□□□□□ -0.6
ABCF3-218ENST00000498136 Q9HAA7 133 aa11.29□□□□□ -0.6
ABCF3-218ENST00000498136 EREGO14944 169 aa11.28□□□□□ -0.6
ABCF3-218ENST00000498136 TWIST1Q15672 202 aa11.28□□□□□ -0.6
ABCF3-218ENST00000498136 SPATA12Q7Z6I5 190 aa11.28□□□□□ -0.6
ABCF3-218ENST00000498136 OR10G8Q8NGN5 311 aa11.28□□□□□ -0.6
ABCF3-218ENST00000498136 KIF25-AS1Q9Y6Z4 181 aa11.28□□□□□ -0.6
ABCF3-218ENST00000498136 URGCP-MRPS24S4R325 110 aa11.28□□□□□ -0.6
ABCF3-218ENST00000498136 PKHD1P08F94 4074 aa11.27□□□□□ -0.6
ABCF3-218ENST00000498136 C16orf90A8MZG2 172 aa11.27□□□□□ -0.61
ABCF3-218ENST00000498136 IBA57-AS1B1ANH7 110 aa11.27□□□□□ -0.61
ABCF3-218ENST00000498136 PSCAO43653 123 aa11.27□□□□□ -0.61
ABCF3-218ENST00000498136 CTRLP40313 264 aa11.27□□□□□ -0.61
ABCF3-218ENST00000498136 FAM231DQ6ZW35 169 aa11.27□□□□□ -0.61
ABCF3-218ENST00000498136 A8MWL6 223 aa11.26□□□□□ -0.61
ABCF3-218ENST00000498136 H7C1H1 209 aa11.26□□□□□ -0.61
ABCF3-218ENST00000498136 KCNIP4Q6PIL6 250 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms