RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 GATCO43716 136 aaKnown RBP13.71□□□□□ -0.21
HLA-B-255ENST00000498007 RHOHQ15669 191 aa13.71□□□□□ -0.21
HLA-B-255ENST00000498007 PRADC1Q9BSG0 188 aa13.71□□□□□ -0.21
HLA-B-255ENST00000498007 IGLV2-18A0A075B6J9 118 aa13.7□□□□□ -0.22
HLA-B-255ENST00000498007 TRBV6-4A0A1B0GX49 114 aa13.7□□□□□ -0.22
HLA-B-255ENST00000498007 ESRGQ1W209 222 aa13.7□□□□□ -0.22
HLA-B-255ENST00000498007 TMEM241Q24JQ0 296 aa13.7□□□□□ -0.22
HLA-B-255ENST00000498007 UFSP1Q6NVU6 142 aa13.7□□□□□ -0.22
HLA-B-255ENST00000498007 Q6ZSN1 163 aa13.7□□□□□ -0.22
HLA-B-255ENST00000498007 FAM231DQ6ZW35 169 aa13.7□□□□□ -0.22
HLA-B-255ENST00000498007 ADIRFQ15847 76 aa13.69□□□□□ -0.22
HLA-B-255ENST00000498007 SOHLH1Q5JUK2 328 aa13.69□□□□□ -0.22
HLA-B-255ENST00000498007 LYZL1Q6UWQ5 148 aa13.69□□□□□ -0.22
HLA-B-255ENST00000498007 NAT8Q9UHE5 227 aa13.69□□□□□ -0.22
HLA-B-255ENST00000498007 A0A1W2PPQ1 181 aa13.68□□□□□ -0.22
HLA-B-255ENST00000498007 CRYGDP07320 174 aa13.68□□□□□ -0.22
HLA-B-255ENST00000498007 FAM3BP58499 235 aaPredicted RBP13.68□□□□□ -0.22
HLA-B-255ENST00000498007 RPL23P62829 140 aaKnown RBP13.68□□□□□ -0.22
HLA-B-255ENST00000498007 NEGR1Q7Z3B1 354 aa13.68□□□□□ -0.22
HLA-B-255ENST00000498007 AP1S3Q96PC3 154 aa13.68□□□□□ -0.22
HLA-B-255ENST00000498007 F2Z2F3 143 aa13.67□□□□□ -0.22
HLA-B-255ENST00000498007 CTRLP40313 264 aa13.67□□□□□ -0.22
HLA-B-255ENST00000498007 CACNG7P62955 275 aa13.67□□□□□ -0.22
HLA-B-255ENST00000498007 ZNF56Q15929 161 aa13.67□□□□□ -0.22
HLA-B-255ENST00000498007 C14orf178Q8N769 122 aaPredicted RBP13.67□□□□□ -0.22
HLA-B-255ENST00000498007 M0R2N4 97 aa13.66□□□□□ -0.22
HLA-B-255ENST00000498007 SMIM17P0DL12 118 aa13.66□□□□□ -0.22
HLA-B-255ENST00000498007 ZNRF2Q8NHG8 242 aa13.66□□□□□ -0.22
HLA-B-255ENST00000498007 ISOC2Q96AB3 205 aa13.66□□□□□ -0.22
HLA-B-255ENST00000498007 MRPS16Q9Y3D3 137 aaKnown RBP13.66□□□□□ -0.22
HLA-B-255ENST00000498007 A8MWL6 223 aa13.65□□□□□ -0.22
HLA-B-255ENST00000498007 C15orf54Q8N8G6 183 aa13.65□□□□□ -0.22
HLA-B-255ENST00000498007 GTSF1Q8WW33 167 aa13.65□□□□□ -0.22
HLA-B-255ENST00000498007 OSTCQ9NRP0 149 aa13.65□□□□□ -0.22
HLA-B-255ENST00000498007 MSRB1Q9NZV6 116 aa13.65□□□□□ -0.22
HLA-B-255ENST00000498007 GAGE12JA6NER3 117 aa13.64□□□□□ -0.23
HLA-B-255ENST00000498007 GAGE1Q13065 139 aa13.64□□□□□ -0.23
HLA-B-255ENST00000498007 GAGE4Q13068 117 aa13.64□□□□□ -0.23
HLA-B-255ENST00000498007 GAGE5Q13069 117 aa13.64□□□□□ -0.23
HLA-B-255ENST00000498007 GAGE13Q4V321 117 aa13.64□□□□□ -0.23
HLA-B-255ENST00000498007 CT83Q5H943 113 aa13.64□□□□□ -0.23
HLA-B-255ENST00000498007 LYPD5Q6UWN5 251 aa13.64□□□□□ -0.23
HLA-B-255ENST00000498007 MGPP08493 103 aa13.63□□□□□ -0.23
HLA-B-255ENST00000498007 SH2D6Q7Z4S9 175 aa13.63□□□□□ -0.23
HLA-B-255ENST00000498007 UPK3BQ9BT76 320 aa13.63□□□□□ -0.23
HLA-B-255ENST00000498007 F5H697 171 aa13.62□□□□□ -0.23
HLA-B-255ENST00000498007 NTF3P20783 257 aa13.62□□□□□ -0.23
HLA-B-255ENST00000498007 TWIST1Q15672 202 aa13.62□□□□□ -0.23
HLA-B-255ENST00000498007 PGLYRP4Q96LB8 373 aa13.62□□□□□ -0.23
HLA-B-255ENST00000498007 Q9UF83 564 aa13.62□□□□□ -0.23
HLA-B-255ENST00000498007 DNAH2Q9P225 4427 aa13.61□□□□□ -0.23
HLA-B-255ENST00000498007 TRGC1P0CF51 173 aa13.61□□□□□ -0.23
HLA-B-255ENST00000498007 RAB4BP61018 213 aa13.61□□□□□ -0.23
HLA-B-255ENST00000498007 OR10G8Q8NGN5 311 aa13.61□□□□□ -0.23
HLA-B-255ENST00000498007 TSKUQ8WUA8 353 aa13.61□□□□□ -0.23
HLA-B-255ENST00000498007 Q9H8V8 135 aa13.61□□□□□ -0.23
HLA-B-255ENST00000498007 V9GYV3 84 aa13.61□□□□□ -0.23
HLA-B-255ENST00000498007 CNFNQ9BYD5 112 aa13.6□□□□□ -0.23
HLA-B-255ENST00000498007 KIF25-AS1Q9Y6Z4 181 aa13.6□□□□□ -0.23
HLA-B-255ENST00000498007 DNAH10Q8IVF4 4471 aa13.59□□□□□ -0.23
HLA-B-255ENST00000498007 HIGD1CA8MV81 97 aa13.59□□□□□ -0.23
HLA-B-255ENST00000498007 EVI2AP22794 236 aa13.59□□□□□ -0.23
HLA-B-255ENST00000498007 WDR73Q6P4I2 378 aa13.59□□□□□ -0.23
HLA-B-255ENST00000498007 ATP6V0E2Q8NHE4 81 aa13.59□□□□□ -0.23
HLA-B-255ENST00000498007 BORCS7Q96B45 105 aa13.59□□□□□ -0.23
HLA-B-255ENST00000498007 NBDYA0A0U1RRE5 68 aa13.58□□□□□ -0.24
HLA-B-255ENST00000498007 LINC00694P0DN24 101 aa13.58□□□□□ -0.24
HLA-B-255ENST00000498007 GFRA4Q9GZZ7 299 aa13.58□□□□□ -0.24
HLA-B-255ENST00000498007 TRBV10-1A0A0K0K1A3 114 aa13.57□□□□□ -0.24
HLA-B-255ENST00000498007 SIVA1O15304 175 aa13.57□□□□□ -0.24
HLA-B-255ENST00000498007 LINC00315P59091 139 aa13.57□□□□□ -0.24
HLA-B-255ENST00000498007 COMMD7Q86VX2 200 aa13.57□□□□□ -0.24
HLA-B-255ENST00000498007 DPH3P1Q9H4G8 78 aa13.57□□□□□ -0.24
HLA-B-255ENST00000498007 FRAS1Q86XX4 4008 aa13.57□□□□□ -0.24
HLA-B-255ENST00000498007 RPL36AP83881 106 aaKnown RBP13.56□□□□□ -0.24
HLA-B-255ENST00000498007 SUMO4Q6EEV6 95 aa13.56□□□□□ -0.24
HLA-B-255ENST00000498007 UQCC3Q6UW78 93 aa13.56□□□□□ -0.24
HLA-B-255ENST00000498007 Q6ZR54 194 aa13.56□□□□□ -0.24
HLA-B-255ENST00000498007 WFDC10BQ8IUB3 73 aa13.56□□□□□ -0.24
HLA-B-255ENST00000498007 RPL36ALQ969Q0 106 aaKnown RBP13.56□□□□□ -0.24
HLA-B-255ENST00000498007 GTSF1LQ9H1H1 148 aa13.56□□□□□ -0.24
HLA-B-255ENST00000498007 FAM231BA6NCW3 169 aa13.55□□□□□ -0.24
HLA-B-255ENST00000498007 FOXA3P55318 350 aaPredicted RBP13.55□□□□□ -0.24
HLA-B-255ENST00000498007 TIRAPP58753 221 aa13.55□□□□□ -0.24
HLA-B-255ENST00000498007 SMIM15Q7Z3B0 74 aa13.55□□□□□ -0.24
HLA-B-255ENST00000498007 NEXN-AS1Q8NBZ9 246 aa13.55□□□□□ -0.24
HLA-B-255ENST00000498007 TRBV7-3A0A075B6L6 115 aa13.54□□□□□ -0.24
HLA-B-255ENST00000498007 TTC32Q5I0X7 151 aa13.54□□□□□ -0.24
HLA-B-255ENST00000498007 OR10J3Q5JRS4 329 aa13.54□□□□□ -0.24
HLA-B-255ENST00000498007 A0A1B0GUT8 65 aa13.53□□□□□ -0.24
HLA-B-255ENST00000498007 PNRC1Q12796 327 aaPredicted RBP13.53□□□□□ -0.24
HLA-B-255ENST00000498007 NUP35Q8NFH5 326 aa13.53□□□□□ -0.24
HLA-B-255ENST00000498007 KRTAP1-5Q9BYS1 174 aa13.53□□□□□ -0.24
HLA-B-255ENST00000498007 NAT8BQ9UHF3 227 aa13.53□□□□□ -0.24
HLA-B-255ENST00000498007 TRAV8-6A0A0B4J262 113 aa13.52□□□□□ -0.25
HLA-B-255ENST00000498007 H7C1H1 209 aa13.52□□□□□ -0.25
HLA-B-255ENST00000498007 UBE2D3P61077 147 aa13.52□□□□□ -0.25
HLA-B-255ENST00000498007 UBE2D2P62837 147 aa13.52□□□□□ -0.25
HLA-B-255ENST00000498007 LELP1Q5T871 98 aa13.52□□□□□ -0.25
HLA-B-255ENST00000498007 SMIM27A0A1W2PRY6 76 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 259.2 ms