RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 FLNCQ14315 2725 aa8.79□□□□□ -1
SNRNP200-208ENST00000497539 IGHV3-35A0A0C4DH35 117 aa8.79□□□□□ -1
SNRNP200-208ENST00000497539 HLA-DMBP28068 263 aa8.79□□□□□ -1
SNRNP200-208ENST00000497539 BLCAPP62952 87 aa8.79□□□□□ -1
SNRNP200-208ENST00000497539 ZNF493Q6ZR52 646 aa8.79□□□□□ -1
SNRNP200-208ENST00000497539 IGLL5B9A064 214 aa8.78□□□□□ -1
SNRNP200-208ENST00000497539 GATA1P15976 413 aaPredicted RBP8.78□□□□□ -1
SNRNP200-208ENST00000497539 ZNF80P51504 273 aaPredicted RBP8.78□□□□□ -1
SNRNP200-208ENST00000497539 TINCRA0A1B0GVN0 87 aa8.78□□□□□ -1
SNRNP200-208ENST00000497539 IGHV4-59P01825 116 aa8.78□□□□□ -1
SNRNP200-208ENST00000497539 ZNF688P0C7X2 276 aa8.78□□□□□ -1
SNRNP200-208ENST00000497539 ASIPP42127 132 aa8.78□□□□□ -1
SNRNP200-208ENST00000497539 FXYD2P54710 66 aa8.78□□□□□ -1
SNRNP200-208ENST00000497539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.78□□□□□ -18e-7■■■□□ 17.7
SNRNP200-208ENST00000497539 ZNF462Q96JM2 2506 aa8.78□□□□□ -1
SNRNP200-208ENST00000497539 TRAV8-2A0A0B4J237 113 aa8.77□□□□□ -1
SNRNP200-208ENST00000497539 IGLC6P0CF74 106 aa8.77□□□□□ -1
SNRNP200-208ENST00000497539 PSMB8P28062 276 aa8.77□□□□□ -1
SNRNP200-208ENST00000497539 CFAP126Q5VTH2 177 aa8.77□□□□□ -1
SNRNP200-208ENST00000497539 MYOZ3Q8TDC0 251 aa8.77□□□□□ -1
SNRNP200-208ENST00000497539 BAALCQ8WXS3 180 aa8.77□□□□□ -1
SNRNP200-208ENST00000497539 CARD19Q96LW7 228 aa8.77□□□□□ -1
SNRNP200-208ENST00000497539 PRR25Q96S07 402 aa8.77□□□□□ -1
SNRNP200-208ENST00000497539 PRO0628Q9UI54 55 aa8.77□□□□□ -1
SNRNP200-208ENST00000497539 U3KQK5 164 aa8.77□□□□□ -1
SNRNP200-208ENST00000497539 Q6ZS46 218 aa8.77□□□□□ -1.01
SNRNP200-208ENST00000497539 PSMG3-AS1Q96PY0 264 aa8.77□□□□□ -1.01
SNRNP200-208ENST00000497539 K7EMT4 169 aa8.77□□□□□ -1.01
SNRNP200-208ENST00000497539 SNCGO76070 127 aa8.77□□□□□ -1.01
SNRNP200-208ENST00000497539 PLA2G2AP14555 144 aa8.77□□□□□ -1.01
SNRNP200-208ENST00000497539 SMCPP49901 116 aaPredicted RBP8.77□□□□□ -1.01
SNRNP200-208ENST00000497539 Q8N2B8 174 aa8.77□□□□□ -1.01
SNRNP200-208ENST00000497539 LINC00527Q9UJ94 153 aa8.77□□□□□ -1.01
SNRNP200-208ENST00000497539 PRSS1P07477 247 aa8.76□□□□□ -1.01
SNRNP200-208ENST00000497539 LEPP41159 167 aa8.76□□□□□ -1.01
SNRNP200-208ENST00000497539 GTSCR1Q86UQ5 136 aa8.76□□□□□ -1.01
SNRNP200-208ENST00000497539 KLK15Q9H2R5 256 aa8.76□□□□□ -1.01
SNRNP200-208ENST00000497539 TRAV4A0A0B4J268 109 aa8.75□□□□□ -1.01
SNRNP200-208ENST00000497539 SOCS3O14543 225 aa8.75□□□□□ -1.01
SNRNP200-208ENST00000497539 NDUFA7O95182 113 aa8.75□□□□□ -1.01
SNRNP200-208ENST00000497539 MALP21145 153 aa8.75□□□□□ -1.01
SNRNP200-208ENST00000497539 Q96MF0 132 aa8.75□□□□□ -1.01
SNRNP200-208ENST00000497539 HIGD1BQ9P298 99 aa8.75□□□□□ -1.01
SNRNP200-208ENST00000497539 V9GYY9 64 aa8.75□□□□□ -1.01
SNRNP200-208ENST00000497539 TRBV12-3P01733 135 aa8.75□□□□□ -1.01
SNRNP200-208ENST00000497539 C9orf47Q6ZRZ4 202 aa8.75□□□□□ -1.01
SNRNP200-208ENST00000497539 ZNF575Q86XF7 245 aa8.75□□□□□ -1.01
SNRNP200-208ENST00000497539 GPHB5Q86YW7 130 aa8.75□□□□□ -1.01
SNRNP200-208ENST00000497539 TMEM86BQ8N661 226 aa8.75□□□□□ -1.01
SNRNP200-208ENST00000497539 AKAP6Q13023 2319 aa8.75□□□□□ -1.01
SNRNP200-208ENST00000497539 ERCC8Q13216 396 aa8.74□□□□□ -1.01
SNRNP200-208ENST00000497539 TEN1Q86WV5 123 aa8.74□□□□□ -1.01
SNRNP200-208ENST00000497539 ZNF702PQ9H963 129 aa8.74□□□□□ -1.01
SNRNP200-208ENST00000497539 EDA2RQ9HAV5 297 aa8.74□□□□□ -1.01
SNRNP200-208ENST00000497539 LENEPQ9Y5L5 61 aa8.74□□□□□ -1.01
SNRNP200-208ENST00000497539 UNQ9165/PRO28630Q6UXU0 137 aa8.74□□□□□ -1.01
SNRNP200-208ENST00000497539 NHP2Q9NX24 153 aaKnown RBP8.74□□□□□ -1.01
SNRNP200-208ENST00000497539 HHLA3Q9XRX5 114 aa8.74□□□□□ -1.01
SNRNP200-208ENST00000497539 FBN2P35556 2912 aa8.73□□□□□ -1.01
SNRNP200-208ENST00000497539 IGHV7-4-1A0A0J9YVY3 117 aa8.73□□□□□ -1.01
SNRNP200-208ENST00000497539 J3QKU1 62 aa8.73□□□□□ -1.01
SNRNP200-208ENST00000497539 ELANEP08246 267 aa8.73□□□□□ -1.01
SNRNP200-208ENST00000497539 RNF185Q96GF1 192 aa8.73□□□□□ -1.01
SNRNP200-208ENST00000497539 FOXC2Q99958 501 aa8.73□□□□□ -1.01
SNRNP200-208ENST00000497539 HERVK_113P63121 156 aa8.73□□□□□ -1.01
SNRNP200-208ENST00000497539 DUSP14O95147 198 aaKnown RBP8.72□□□□□ -1.01
SNRNP200-208ENST00000497539 LINC01559Q495D7 138 aa8.72□□□□□ -1.01
SNRNP200-208ENST00000497539 AMTNQ6UX39 209 aa8.72□□□□□ -1.01
SNRNP200-208ENST00000497539 MAPK1IP1LQ8NDC0 245 aa8.72□□□□□ -1.01
SNRNP200-208ENST00000497539 CHAC1Q9BUX1 264 aa8.72□□□□□ -1.01
SNRNP200-208ENST00000497539 IGHV3OR16-13A0A075B7E8 117 aa8.72□□□□□ -1.01
SNRNP200-208ENST00000497539 IGHV3-74A0A0B4J1X5 117 aa8.72□□□□□ -1.01
SNRNP200-208ENST00000497539 IGHV3-66A0A0C4DH42 116 aa8.72□□□□□ -1.01
SNRNP200-208ENST00000497539 PRAC2D3DTV9 90 aa8.72□□□□□ -1.01
SNRNP200-208ENST00000497539 ZC2HC1BQ5TFG8 222 aa8.72□□□□□ -1.01
SNRNP200-208ENST00000497539 TMEM158Q8WZ71 300 aa8.72□□□□□ -1.01
SNRNP200-208ENST00000497539 CNFNQ9BYD5 112 aa8.72□□□□□ -1.01
SNRNP200-208ENST00000497539 DAZ1Q9NQZ3 744 aaKnown RBP8.72□□□□□ -1.01
SNRNP200-208ENST00000497539 MYO18BQ8IUG5 2567 aa8.71□□□□□ -1.01
SNRNP200-208ENST00000497539 TRBV25-1A0A075B6N4 114 aa8.71□□□□□ -1.01
SNRNP200-208ENST00000497539 LINC00477Q96M19 166 aa8.71□□□□□ -1.01
SNRNP200-208ENST00000497539 TRAV26-2A0A0B4J265 109 aa8.71□□□□□ -1.02
SNRNP200-208ENST00000497539 OVOL1O14753 267 aa8.71□□□□□ -1.02
SNRNP200-208ENST00000497539 RNF182Q8N6D2 247 aa8.71□□□□□ -1.02
SNRNP200-208ENST00000497539 MAPKAPK5-AS1Q8N8E1 139 aa8.71□□□□□ -1.02
SNRNP200-208ENST00000497539 AGRNO00468 2067 aa8.71□□□□□ -1.02
SNRNP200-208ENST00000497539 M0R2P5 195 aa8.7□□□□□ -1.02
SNRNP200-208ENST00000497539 LGALS9O00182 355 aa8.7□□□□□ -1.02
SNRNP200-208ENST00000497539 Q6ZQT7 251 aa8.7□□□□□ -1.02
SNRNP200-208ENST00000497539 SBSPONQ8IVN8 264 aa8.7□□□□□ -1.02
SNRNP200-208ENST00000497539 AGPAT4-IT1Q9H0P7 198 aa8.7□□□□□ -1.02
SNRNP200-208ENST00000497539 IGHV3-11P01762 117 aa8.7□□□□□ -1.02
SNRNP200-208ENST00000497539 IGKCP01834 107 aa8.7□□□□□ -1.02
SNRNP200-208ENST00000497539 LGALS1P09382 135 aaKnown RBP8.7□□□□□ -1.02
SNRNP200-208ENST00000497539 FCER1GP30273 86 aa8.7□□□□□ -1.02
SNRNP200-208ENST00000497539 RRN3P1Q2M238 152 aa8.7□□□□□ -1.02
SNRNP200-208ENST00000497539 Q5XG85 94 aa8.7□□□□□ -1.02
SNRNP200-208ENST00000497539 FAM19A4Q96LR4 140 aa8.7□□□□□ -1.02
SNRNP200-208ENST00000497539 HOXA3O43365 443 aaPredicted RBP8.69□□□□□ -1.02
SNRNP200-208ENST00000497539 C4orf26Q17RF5 130 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms