RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 EML6Q6ZMW3 1958 aa3.54□□□□□ -1.84
BRCA1-224ENST00000497488 BAHCC1Q9P281 2608 aa3.54□□□□□ -1.84
BRCA1-224ENST00000497488 TRAV27A0A087WT01 109 aa3.54□□□□□ -1.84
BRCA1-224ENST00000497488 MRPS10P82664 201 aaKnown RBP3.54□□□□□ -1.84
BRCA1-224ENST00000497488 NNATQ16517 81 aa3.54□□□□□ -1.84
BRCA1-224ENST00000497488 ZNF181Q2M3W8 571 aa3.54□□□□□ -1.84
BRCA1-224ENST00000497488 ZNF791Q3KP31 576 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-224ENST00000497488 Q6ZQT0 140 aa3.54□□□□□ -1.84
BRCA1-224ENST00000497488 FAM216BQ8N7L0 139 aa3.54□□□□□ -1.84
BRCA1-224ENST00000497488 WFDC11Q8NEX6 87 aa3.54□□□□□ -1.84
BRCA1-224ENST00000497488 PROK2Q9HC23 129 aa3.54□□□□□ -1.84
BRCA1-224ENST00000497488 CHCHD2Q9Y6H1 151 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-224ENST00000497488 NACAE9PAV3 2078 aa3.54□□□□□ -1.84
BRCA1-224ENST00000497488 IGHV3-64A0A075B6Q5 118 aa3.53□□□□□ -1.84
BRCA1-224ENST00000497488 IGKV2D-24A0A075B6R9 120 aa3.53□□□□□ -1.84
BRCA1-224ENST00000497488 A0A1B0GVG6 124 aa3.53□□□□□ -1.84
BRCA1-224ENST00000497488 HBDP02042 147 aa3.53□□□□□ -1.84
BRCA1-224ENST00000497488 LINC00032P0C843 101 aa3.53□□□□□ -1.84
BRCA1-224ENST00000497488 HLA-DRB4P13762 266 aa3.53□□□□□ -1.84
BRCA1-224ENST00000497488 RPL38P63173 70 aaKnown RBP3.53□□□□□ -1.84
BRCA1-224ENST00000497488 CDK5R1Q15078 307 aa3.53□□□□□ -1.84
BRCA1-224ENST00000497488 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
BRCA1-224ENST00000497488 TMEM91Q6ZNR0 172 aa3.53□□□□□ -1.84
BRCA1-224ENST00000497488 RNF182Q8N6D2 247 aa3.53□□□□□ -1.84
BRCA1-224ENST00000497488 SDF2Q99470 211 aa3.53□□□□□ -1.84
BRCA1-224ENST00000497488 LINC00467Q9BRT7 94 aa3.53□□□□□ -1.84
BRCA1-224ENST00000497488 PDCD10Q9BUL8 212 aa3.53□□□□□ -1.84
BRCA1-224ENST00000497488 TTTY12Q9BZ98 90 aa3.53□□□□□ -1.84
BRCA1-224ENST00000497488 HLA-DRB4X5D2U9 266 aa3.53□□□□□ -1.84
BRCA1-224ENST00000497488 FASNP49327 2511 aaKnown RBP3.53□□□□□ -1.84
BRCA1-224ENST00000497488 CROCCQ5TZA2 2017 aa3.53□□□□□ -1.84
BRCA1-224ENST00000497488 HELZ2Q9BYK8 2649 aaKnown RBP3.52□□□□□ -1.85
BRCA1-224ENST00000497488 IGLV4-60A0A075B6I1 120 aa3.52□□□□□ -1.85
BRCA1-224ENST00000497488 CORTO00230 105 aa3.52□□□□□ -1.85
BRCA1-224ENST00000497488 CTSDP07339 412 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-224ENST00000497488 AAED1Q7RTV5 226 aa3.52□□□□□ -1.85
BRCA1-224ENST00000497488 HMGN2P46Q86SG4 172 aa3.52□□□□□ -1.85
BRCA1-224ENST00000497488 TEN1Q86WV5 123 aa3.52□□□□□ -1.85
BRCA1-224ENST00000497488 TCTEX1D1Q8N7M0 179 aa3.52□□□□□ -1.85
BRCA1-224ENST00000497488 CHCHD1Q96BP2 118 aaKnown RBP3.52□□□□□ -1.85
BRCA1-224ENST00000497488 TMEM191AQ9H0A3 160 aa3.52□□□□□ -1.85
BRCA1-224ENST00000497488 COMMD3Q9UBI1 195 aa3.52□□□□□ -1.85
BRCA1-224ENST00000497488 MYO18BQ8IUG5 2567 aa3.52□□□□□ -1.85
BRCA1-224ENST00000497488 SPTA1P02549 2419 aa3.51□□□□□ -1.85
BRCA1-224ENST00000497488 H3BQF6 201 aa3.51□□□□□ -1.85
BRCA1-224ENST00000497488 TRGC1P0CF51 173 aa3.51□□□□□ -1.85
BRCA1-224ENST00000497488 RBP2P50120 134 aa3.51□□□□□ -1.85
BRCA1-224ENST00000497488 MRPS36P82909 103 aaKnown RBP3.51□□□□□ -1.85
BRCA1-224ENST00000497488 PLGLB1Q02325 96 aa3.51□□□□□ -1.85
BRCA1-224ENST00000497488 ESRGQ1W209 222 aa3.51□□□□□ -1.85
BRCA1-224ENST00000497488 Q8IYB0 196 aa3.51□□□□□ -1.85
BRCA1-224ENST00000497488 RETNLBQ9BQ08 111 aa3.51□□□□□ -1.85
BRCA1-224ENST00000497488 ASH1LQ9NR48 2969 aaKnown RBP3.51□□□□□ -1.85
BRCA1-224ENST00000497488 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-224ENST00000497488 LOC100130705A0A1B0GUX0 176 aa3.5□□□□□ -1.85
BRCA1-224ENST00000497488 TPT1P13693 172 aaKnown RBP3.5□□□□□ -1.85
BRCA1-224ENST00000497488 GUCA1AP43080 201 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-224ENST00000497488 SNRPD3P62318 126 aaKnown RBP3.5□□□□□ -1.85
BRCA1-224ENST00000497488 CLECL1Q8IZS7 167 aa3.5□□□□□ -1.85
BRCA1-224ENST00000497488 LINC00311Q8N616 119 aa3.5□□□□□ -1.85
BRCA1-224ENST00000497488 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-224ENST00000497488 DEDD2Q8WXF8 326 aa3.5□□□□□ -1.85
BRCA1-224ENST00000497488 PPP3R2Q96LZ3 170 aa3.5□□□□□ -1.85
BRCA1-224ENST00000497488 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
BRCA1-224ENST00000497488 SOX21Q9Y651 276 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-224ENST00000497488 NCKAP5O14513 1909 aa3.5□□□□□ -1.85
BRCA1-224ENST00000497488 EXPH5Q8NEV8 1989 aa3.49□□□□□ -1.85
BRCA1-224ENST00000497488 UTP20O75691 2785 aaKnown RBP3.49□□□□□ -1.85
BRCA1-224ENST00000497488 FLNCQ14315 2725 aa3.49□□□□□ -1.85
BRCA1-224ENST00000497488 HRES1P13985 223 aa3.49□□□□□ -1.85
BRCA1-224ENST00000497488 FABP4P15090 132 aa3.49□□□□□ -1.85
BRCA1-224ENST00000497488 LSM3P62310 102 aaKnown RBP3.49□□□□□ -1.85
BRCA1-224ENST00000497488 MOBPQ13875 183 aa3.49□□□□□ -1.85
BRCA1-224ENST00000497488 OR5D14Q8NGL3 314 aa3.49□□□□□ -1.85
BRCA1-224ENST00000497488 SCN3BQ9NY72 215 aa3.49□□□□□ -1.85
BRCA1-224ENST00000497488 TAS2R4Q9NYW5 299 aa3.49□□□□□ -1.85
BRCA1-224ENST00000497488 BOKQ9UMX3 212 aaPredicted RBP3.49□□□□□ -1.85
BRCA1-224ENST00000497488 FBN2P35556 2912 aa3.49□□□□□ -1.85
BRCA1-224ENST00000497488 NBASA2RRP1 2371 aa3.48□□□□□ -1.85
BRCA1-224ENST00000497488 USP9XQ93008 2570 aaPredicted RBP3.48□□□□□ -1.85
BRCA1-224ENST00000497488 TRAV3A0A0B4J244 114 aa3.48□□□□□ -1.85
BRCA1-224ENST00000497488 C20orf202A1L168 122 aa3.48□□□□□ -1.85
BRCA1-224ENST00000497488 HMGN2P05204 90 aaKnown RBP3.48□□□□□ -1.85
BRCA1-224ENST00000497488 IFI6P09912 130 aa3.48□□□□□ -1.85
BRCA1-224ENST00000497488 ZNF90Q03938 601 aa3.48□□□□□ -1.85
BRCA1-224ENST00000497488 IZUMO2Q6UXV1 221 aa3.48□□□□□ -1.85
BRCA1-224ENST00000497488 KRTAP11-1Q8IUC1 163 aa3.48□□□□□ -1.85
BRCA1-224ENST00000497488 OR4C12Q96R67 309 aa3.48□□□□□ -1.85
BRCA1-224ENST00000497488 PSMG3Q9BT73 122 aaPredicted RBP3.48□□□□□ -1.85
BRCA1-224ENST00000497488 CCDC167Q9P0B6 97 aa3.48□□□□□ -1.85
BRCA1-224ENST00000497488 KIAA1549Q9HCM3 1950 aa3.48□□□□□ -1.85
BRCA1-224ENST00000497488 ADGRG4Q8IZF6 3080 aa3.47□□□□□ -1.85
BRCA1-224ENST00000497488 ESPL1Q14674 2120 aa3.47□□□□□ -1.85
BRCA1-224ENST00000497488 PRRC2CQ9Y520 2896 aaKnown RBP3.47□□□□□ -1.85
BRCA1-224ENST00000497488 IGKV1D-42A0A075B6H8 117 aa3.47□□□□□ -1.85
BRCA1-224ENST00000497488 A0A1W2PNM2 257 aa3.47□□□□□ -1.85
BRCA1-224ENST00000497488 ODF3BA8MYP8 253 aa3.47□□□□□ -1.85
BRCA1-224ENST00000497488 CDC42EP2O14613 210 aa3.47□□□□□ -1.85
BRCA1-224ENST00000497488 ZNF737O75373 536 aa3.47□□□□□ -1.85
BRCA1-224ENST00000497488 HIST1H1BP16401 226 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms