RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 NACAE9PAV3 2078 aa12.92□□□□□ -0.34
TSSC4-210ENST00000496468 IGHV3-73A0A0B4J1V6 119 aa12.91□□□□□ -0.34
TSSC4-210ENST00000496468 C3orf84H3BNL1 204 aa12.91□□□□□ -0.34
TSSC4-210ENST00000496468 SMIM17P0DL12 118 aa12.91□□□□□ -0.34
TSSC4-210ENST00000496468 NTF3P20783 257 aa12.91□□□□□ -0.34
TSSC4-210ENST00000496468 ZFP2Q6ZN57 461 aa12.91□□□□□ -0.34
TSSC4-210ENST00000496468 SAMD10Q9BYL1 202 aa12.91□□□□□ -0.34
TSSC4-210ENST00000496468 MSRB1Q9NZV6 116 aa12.91□□□□□ -0.34
TSSC4-210ENST00000496468 DYNC2H1Q8NCM8 4307 aaKnown RBP12.91□□□□□ -0.34
TSSC4-210ENST00000496468 C7orf77A4D0Y5 90 aa12.9□□□□□ -0.34
TSSC4-210ENST00000496468 FHL2Q14192 279 aa12.9□□□□□ -0.34
TSSC4-210ENST00000496468 TMEM88Q6PEY1 159 aa12.9□□□□□ -0.34
TSSC4-210ENST00000496468 RPS10P5Q9NQ39 176 aa12.9□□□□□ -0.34
TSSC4-210ENST00000496468 TRAV26-1A0A087WT03 109 aa12.89□□□□□ -0.35
TSSC4-210ENST00000496468 A0A087WWC5 75 aa12.89□□□□□ -0.35
TSSC4-210ENST00000496468 RIGQ13278 110 aa12.89□□□□□ -0.35
TSSC4-210ENST00000496468 UFSP1Q6NVU6 142 aa12.89□□□□□ -0.35
TSSC4-210ENST00000496468 C14orf178Q8N769 122 aaPredicted RBP12.89□□□□□ -0.35
TSSC4-210ENST00000496468 PRO0255Q9UI72 69 aa12.89□□□□□ -0.35
TSSC4-210ENST00000496468 CSMD3Q7Z407 3707 aa12.88□□□□□ -0.35
TSSC4-210ENST00000496468 IGLL5B9A064 214 aa12.88□□□□□ -0.35
TSSC4-210ENST00000496468 CRYGDP07320 174 aa12.88□□□□□ -0.35
TSSC4-210ENST00000496468 GATA1P15976 413 aaPredicted RBP12.88□□□□□ -0.35
TSSC4-210ENST00000496468 SLAQ13239 276 aa12.88□□□□□ -0.35
TSSC4-210ENST00000496468 ZNF56Q15929 161 aa12.88□□□□□ -0.35
TSSC4-210ENST00000496468 KCNIP4Q6PIL6 250 aa12.88□□□□□ -0.35
TSSC4-210ENST00000496468 SMIM15Q7Z3B0 74 aa12.88□□□□□ -0.35
TSSC4-210ENST00000496468 FAM210BQ96KR6 192 aa12.88□□□□□ -0.35
TSSC4-210ENST00000496468 A0A0J9YY99 117 aa12.87□□□□□ -0.35
TSSC4-210ENST00000496468 MGPP08493 103 aa12.87□□□□□ -0.35
TSSC4-210ENST00000496468 CASC10Q5T4H9 136 aa12.87□□□□□ -0.35
TSSC4-210ENST00000496468 IMMP2LQ96T52 175 aa12.87□□□□□ -0.35
TSSC4-210ENST00000496468 DPH3P1Q9H4G8 78 aa12.87□□□□□ -0.35
TSSC4-210ENST00000496468 TMEM242Q9NWH2 141 aa12.87□□□□□ -0.35
TSSC4-210ENST00000496468 HHLA3Q9XRX5 114 aa12.87□□□□□ -0.35
TSSC4-210ENST00000496468 PAX4O43316 350 aa12.86□□□□□ -0.35
TSSC4-210ENST00000496468 EVI2AP22794 236 aa12.86□□□□□ -0.35
TSSC4-210ENST00000496468 CRYBA4P53673 196 aa12.86□□□□□ -0.35
TSSC4-210ENST00000496468 FAM3BP58499 235 aaPredicted RBP12.86□□□□□ -0.35
TSSC4-210ENST00000496468 MRPL54Q6P161 138 aaKnown RBP12.86□□□□□ -0.35
TSSC4-210ENST00000496468 A0A1B0GW15 77 aa12.85□□□□□ -0.35
TSSC4-210ENST00000496468 K7EQD1 137 aa12.85□□□□□ -0.35
TSSC4-210ENST00000496468 S100PP25815 95 aa12.85□□□□□ -0.35
TSSC4-210ENST00000496468 HBBP68871 147 aa12.85□□□□□ -0.35
TSSC4-210ENST00000496468 RHOHQ15669 191 aa12.85□□□□□ -0.35
TSSC4-210ENST00000496468 ATP5L2Q7Z4Y8 100 aa12.85□□□□□ -0.35
TSSC4-210ENST00000496468 C15orf53Q8NAA6 179 aa12.85□□□□□ -0.35
TSSC4-210ENST00000496468 KIF25-AS1Q9Y6Z4 181 aa12.85□□□□□ -0.35
TSSC4-210ENST00000496468 SLC25A29Q8N8R3 303 aa12.84□□□□□ -0.35
TSSC4-210ENST00000496468 PRADC1Q9BSG0 188 aa12.84□□□□□ -0.35
TSSC4-210ENST00000496468 TRBV6-4A0A1B0GX49 114 aa12.83□□□□□ -0.36
TSSC4-210ENST00000496468 F5H697 171 aa12.83□□□□□ -0.36
TSSC4-210ENST00000496468 H3BNG1 76 aa12.83□□□□□ -0.36
TSSC4-210ENST00000496468 S100A8P05109 93 aa12.83□□□□□ -0.36
TSSC4-210ENST00000496468 RAB4BP61018 213 aa12.83□□□□□ -0.36
TSSC4-210ENST00000496468 VSIG2Q96IQ7 327 aa12.83□□□□□ -0.36
TSSC4-210ENST00000496468 BTF3L4Q96K17 158 aa12.83□□□□□ -0.36
TSSC4-210ENST00000496468 URGCP-MRPS24S4R325 110 aa12.83□□□□□ -0.36
TSSC4-210ENST00000496468 TRAV9-1A0A075B6T8 112 aa12.82□□□□□ -0.36
TSSC4-210ENST00000496468 A0A1B0GXF2 115 aa12.82□□□□□ -0.36
TSSC4-210ENST00000496468 NUDT3O95989 172 aa12.82□□□□□ -0.36
TSSC4-210ENST00000496468 CAMPP49913 170 aa12.82□□□□□ -0.36
TSSC4-210ENST00000496468 TCTAP57738 103 aa12.82□□□□□ -0.36
TSSC4-210ENST00000496468 Q6ZSN1 163 aa12.82□□□□□ -0.36
TSSC4-210ENST00000496468 TMEM191AQ9H0A3 160 aa12.82□□□□□ -0.36
TSSC4-210ENST00000496468 ICOSQ9Y6W8 199 aa12.82□□□□□ -0.36
TSSC4-210ENST00000496468 PLECQ15149 4684 aaKnown RBP12.82□□□□□ -0.36
TSSC4-210ENST00000496468 GYPEP15421 78 aa12.81□□□□□ -0.36
TSSC4-210ENST00000496468 LINC00315P59091 139 aa12.81□□□□□ -0.36
TSSC4-210ENST00000496468 SUMO4Q6EEV6 95 aa12.8□□□□□ -0.36
TSSC4-210ENST00000496468 ATRAIDQ6UW56 229 aa12.8□□□□□ -0.36
TSSC4-210ENST00000496468 LOC100131303A0A0U1RQF7 123 aa12.79□□□□□ -0.36
TSSC4-210ENST00000496468 H7C1H1 209 aa12.79□□□□□ -0.36
TSSC4-210ENST00000496468 APLNQ9ULZ1 77 aa12.79□□□□□ -0.36
TSSC4-210ENST00000496468 TRBV10-1A0A0K0K1A3 114 aa12.78□□□□□ -0.36
TSSC4-210ENST00000496468 P0DMU3 169 aa12.78□□□□□ -0.36
TSSC4-210ENST00000496468 FAM231AP0DMU4 169 aa12.78□□□□□ -0.36
TSSC4-210ENST00000496468 FAM231CP0DMU5 169 aa12.78□□□□□ -0.36
TSSC4-210ENST00000496468 SRIP30626 198 aa12.78□□□□□ -0.36
TSSC4-210ENST00000496468 AMN1Q8IY45 258 aa12.78□□□□□ -0.36
TSSC4-210ENST00000496468 A0A096LPF7 62 aa12.77□□□□□ -0.37
TSSC4-210ENST00000496468 MRPL23Q16540 153 aaKnown RBP12.77□□□□□ -0.37
TSSC4-210ENST00000496468 GATD1Q8NB37 220 aa12.77□□□□□ -0.37
TSSC4-210ENST00000496468 TRAV26-2A0A0B4J265 109 aa12.76□□□□□ -0.37
TSSC4-210ENST00000496468 GAGE12JA6NER3 117 aa12.76□□□□□ -0.37
TSSC4-210ENST00000496468 GAGE1Q13065 139 aa12.76□□□□□ -0.37
TSSC4-210ENST00000496468 GAGE4Q13068 117 aa12.76□□□□□ -0.37
TSSC4-210ENST00000496468 GAGE5Q13069 117 aa12.76□□□□□ -0.37
TSSC4-210ENST00000496468 GAGE13Q4V321 117 aa12.76□□□□□ -0.37
TSSC4-210ENST00000496468 RASL11AQ6T310 242 aa12.76□□□□□ -0.37
TSSC4-210ENST00000496468 M0QY20 66 aa12.75□□□□□ -0.37
TSSC4-210ENST00000496468 ATP6V1G1O75348 118 aa12.75□□□□□ -0.37
TSSC4-210ENST00000496468 RPL36AP83881 106 aaKnown RBP12.75□□□□□ -0.37
TSSC4-210ENST00000496468 FAM104BQ5XKR9 115 aa12.75□□□□□ -0.37
TSSC4-210ENST00000496468 RPL36ALQ969Q0 106 aaKnown RBP12.75□□□□□ -0.37
TSSC4-210ENST00000496468 MRAP2Q96G30 205 aa12.75□□□□□ -0.37
TSSC4-210ENST00000496468 RNF185Q96GF1 192 aa12.75□□□□□ -0.37
TSSC4-210ENST00000496468 LINC00694P0DN24 101 aa12.74□□□□□ -0.37
TSSC4-210ENST00000496468 RAB4AP20338 218 aa12.74□□□□□ -0.37
TSSC4-210ENST00000496468 SH2D6Q7Z4S9 175 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms