RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 FAM231DQ6ZW35 169 aa8.41□□□□□ -1.06
CSNK1E-213ENST00000495232 C15orf54Q8N8G6 183 aa8.41□□□□□ -1.06
CSNK1E-213ENST00000495232 SLC25A29Q8N8R3 303 aa8.41□□□□□ -1.06
CSNK1E-213ENST00000495232 JPT2Q9H910 190 aa8.41□□□□□ -1.06
CSNK1E-213ENST00000495232 HYDINQ4G0P3 5121 aa8.41□□□□□ -1.06
CSNK1E-213ENST00000495232 RYR3Q15413 4870 aa8.4□□□□□ -1.06
CSNK1E-213ENST00000495232 K7EQD1 137 aa8.4□□□□□ -1.06
CSNK1E-213ENST00000495232 NXPH4O95158 308 aa8.4□□□□□ -1.06
CSNK1E-213ENST00000495232 IGLC6P0CF74 106 aa8.4□□□□□ -1.06
CSNK1E-213ENST00000495232 FAM3BP58499 235 aaPredicted RBP8.4□□□□□ -1.06
CSNK1E-213ENST00000495232 LYZL1Q6UWQ5 148 aa8.4□□□□□ -1.06
CSNK1E-213ENST00000495232 NEGR1Q7Z3B1 354 aa8.4□□□□□ -1.06
CSNK1E-213ENST00000495232 SH2D6Q7Z4S9 175 aa8.4□□□□□ -1.06
CSNK1E-213ENST00000495232 AP1S3Q96PC3 154 aa8.4□□□□□ -1.06
CSNK1E-213ENST00000495232 SAMD10Q9BYL1 202 aa8.4□□□□□ -1.06
CSNK1E-213ENST00000495232 RYR2Q92736 4967 aa8.4□□□□□ -1.07
CSNK1E-213ENST00000495232 RPL23P62829 140 aaKnown RBP8.39□□□□□ -1.07
CSNK1E-213ENST00000495232 OSTCQ9NRP0 149 aa8.39□□□□□ -1.07
CSNK1E-213ENST00000495232 CRYGDP07320 174 aa8.38□□□□□ -1.07
CSNK1E-213ENST00000495232 ZNF56Q15929 161 aa8.38□□□□□ -1.07
CSNK1E-213ENST00000495232 ESRGQ1W209 222 aa8.38□□□□□ -1.07
CSNK1E-213ENST00000495232 CT83Q5H943 113 aa8.38□□□□□ -1.07
CSNK1E-213ENST00000495232 C14orf178Q8N769 122 aaPredicted RBP8.38□□□□□ -1.07
CSNK1E-213ENST00000495232 ISOC2Q96AB3 205 aa8.38□□□□□ -1.07
CSNK1E-213ENST00000495232 BORCS7Q96B45 105 aa8.38□□□□□ -1.07
CSNK1E-213ENST00000495232 LINC00588Q9Y4M8 146 aa8.38□□□□□ -1.07
CSNK1E-213ENST00000495232 KMT2AQ03164 3969 aa8.38□□□□□ -1.07
CSNK1E-213ENST00000495232 LOC100131303A0A0U1RQF7 123 aa8.37□□□□□ -1.07
CSNK1E-213ENST00000495232 F5H697 171 aa8.37□□□□□ -1.07
CSNK1E-213ENST00000495232 TRGC1P0CF51 173 aa8.37□□□□□ -1.07
CSNK1E-213ENST00000495232 NTF3P20783 257 aa8.37□□□□□ -1.07
CSNK1E-213ENST00000495232 CTRLP40313 264 aa8.37□□□□□ -1.07
CSNK1E-213ENST00000495232 TWIST1Q15672 202 aa8.37□□□□□ -1.07
CSNK1E-213ENST00000495232 UFSP1Q6NVU6 142 aa8.37□□□□□ -1.07
CSNK1E-213ENST00000495232 WDR73Q6P4I2 378 aa8.37□□□□□ -1.07
CSNK1E-213ENST00000495232 SMIM15Q7Z3B0 74 aa8.37□□□□□ -1.07
CSNK1E-213ENST00000495232 IGLV2-18A0A075B6J9 118 aa8.36□□□□□ -1.07
CSNK1E-213ENST00000495232 RAB4BP61018 213 aa8.36□□□□□ -1.07
CSNK1E-213ENST00000495232 UQCC3Q6UW78 93 aa8.36□□□□□ -1.07
CSNK1E-213ENST00000495232 LYPD5Q6UWN5 251 aa8.36□□□□□ -1.07
CSNK1E-213ENST00000495232 Q6ZSN1 163 aa8.36□□□□□ -1.07
CSNK1E-213ENST00000495232 OR10G8Q8NGN5 311 aa8.36□□□□□ -1.07
CSNK1E-213ENST00000495232 TSKUQ8WUA8 353 aa8.36□□□□□ -1.07
CSNK1E-213ENST00000495232 PGLYRP4Q96LB8 373 aa8.36□□□□□ -1.07
CSNK1E-213ENST00000495232 GFRA4Q9GZZ7 299 aa8.36□□□□□ -1.07
CSNK1E-213ENST00000495232 MRPS16Q9Y3D3 137 aaKnown RBP8.36□□□□□ -1.07
CSNK1E-213ENST00000495232 FAM231BA6NCW3 169 aa8.35□□□□□ -1.07
CSNK1E-213ENST00000495232 GAGE12JA6NER3 117 aa8.35□□□□□ -1.07
CSNK1E-213ENST00000495232 MGPP08493 103 aa8.35□□□□□ -1.07
CSNK1E-213ENST00000495232 GAGE1Q13065 139 aa8.35□□□□□ -1.07
CSNK1E-213ENST00000495232 GAGE4Q13068 117 aa8.35□□□□□ -1.07
CSNK1E-213ENST00000495232 GAGE5Q13069 117 aa8.35□□□□□ -1.07
CSNK1E-213ENST00000495232 GAGE13Q4V321 117 aa8.35□□□□□ -1.07
CSNK1E-213ENST00000495232 GTSF1Q8WW33 167 aa8.35□□□□□ -1.07
CSNK1E-213ENST00000495232 Q9H8V8 135 aa8.35□□□□□ -1.07
CSNK1E-213ENST00000495232 MSRB1Q9NZV6 116 aa8.35□□□□□ -1.07
CSNK1E-213ENST00000495232 DNAH6Q9C0G6 4158 aa8.35□□□□□ -1.07
CSNK1E-213ENST00000495232 TRBV10-1A0A0K0K1A3 114 aa8.34□□□□□ -1.07
CSNK1E-213ENST00000495232 HIGD1CA8MV81 97 aa8.34□□□□□ -1.07
CSNK1E-213ENST00000495232 M0R2N4 97 aa8.34□□□□□ -1.07
CSNK1E-213ENST00000495232 FOXA3P55318 350 aaPredicted RBP8.34□□□□□ -1.07
CSNK1E-213ENST00000495232 RPL36AP83881 106 aaKnown RBP8.34□□□□□ -1.07
CSNK1E-213ENST00000495232 PNRC1Q12796 327 aaPredicted RBP8.34□□□□□ -1.07
CSNK1E-213ENST00000495232 ATP6V0E2Q8NHE4 81 aa8.34□□□□□ -1.07
CSNK1E-213ENST00000495232 ZNRF2Q8NHG8 242 aa8.34□□□□□ -1.07
CSNK1E-213ENST00000495232 RPL36ALQ969Q0 106 aaKnown RBP8.34□□□□□ -1.07
CSNK1E-213ENST00000495232 UPK3BQ9BT76 320 aa8.34□□□□□ -1.07
CSNK1E-213ENST00000495232 CNFNQ9BYD5 112 aa8.34□□□□□ -1.07
CSNK1E-213ENST00000495232 DPH3P1Q9H4G8 78 aa8.34□□□□□ -1.07
CSNK1E-213ENST00000495232 V9GYV3 84 aa8.34□□□□□ -1.07
CSNK1E-213ENST00000495232 H7C1H1 209 aa8.33□□□□□ -1.08
CSNK1E-213ENST00000495232 EVI2AP22794 236 aa8.33□□□□□ -1.08
CSNK1E-213ENST00000495232 COMMD7Q86VX2 200 aa8.33□□□□□ -1.08
CSNK1E-213ENST00000495232 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.33□□□□□ -1.08
CSNK1E-213ENST00000495232 TRBV7-3A0A075B6L6 115 aa8.32□□□□□ -1.08
CSNK1E-213ENST00000495232 A0A1B0GUT8 65 aa8.32□□□□□ -1.08
CSNK1E-213ENST00000495232 F8W036 122 aa8.32□□□□□ -1.08
CSNK1E-213ENST00000495232 PPP1R2P9O14990 202 aa8.32□□□□□ -1.08
CSNK1E-213ENST00000495232 SIVA1O15304 175 aa8.32□□□□□ -1.08
CSNK1E-213ENST00000495232 GTSF1LQ9H1H1 148 aa8.32□□□□□ -1.08
CSNK1E-213ENST00000495232 NAT8BQ9UHF3 227 aa8.32□□□□□ -1.08
CSNK1E-213ENST00000495232 KIF25-AS1Q9Y6Z4 181 aa8.32□□□□□ -1.08
CSNK1E-213ENST00000495232 TRAV8-6A0A0B4J262 113 aa8.31□□□□□ -1.08
CSNK1E-213ENST00000495232 TMEM218A2RU14 115 aa8.31□□□□□ -1.08
CSNK1E-213ENST00000495232 TIRAPP58753 221 aa8.31□□□□□ -1.08
CSNK1E-213ENST00000495232 RIGQ13278 110 aa8.31□□□□□ -1.08
CSNK1E-213ENST00000495232 TTC32Q5I0X7 151 aa8.31□□□□□ -1.08
CSNK1E-213ENST00000495232 OR10J3Q5JRS4 329 aa8.31□□□□□ -1.08
CSNK1E-213ENST00000495232 TRAV9-2A0A087WT02 112 aa8.3□□□□□ -1.08
CSNK1E-213ENST00000495232 NBDYA0A0U1RRE5 68 aa8.3□□□□□ -1.08
CSNK1E-213ENST00000495232 LINC00862A6NCI5 91 aa8.3□□□□□ -1.08
CSNK1E-213ENST00000495232 MT-ND4LP03901 98 aa8.3□□□□□ -1.08
CSNK1E-213ENST00000495232 NUP35Q8NFH5 326 aa8.3□□□□□ -1.08
CSNK1E-213ENST00000495232 Q9UF83 564 aa8.3□□□□□ -1.08
CSNK1E-213ENST00000495232 TNFRSF18Q9Y5U5 241 aa8.3□□□□□ -1.08
CSNK1E-213ENST00000495232 A0A087WWC5 75 aa8.29□□□□□ -1.08
CSNK1E-213ENST00000495232 SMIM27A0A1W2PRY6 76 aa8.29□□□□□ -1.08
CSNK1E-213ENST00000495232 LINC00315P59091 139 aa8.29□□□□□ -1.08
CSNK1E-213ENST00000495232 LELP1Q5T871 98 aa8.29□□□□□ -1.08
CSNK1E-213ENST00000495232 SUMO4Q6EEV6 95 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms