RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 LECT2O14960 151 aa7.72□□□□□ -1.17
VTI1A-208ENST00000494728 DNLZQ5SXM8 178 aa7.72□□□□□ -1.17
VTI1A-208ENST00000494728 FAM74A4Q5TZK3 123 aa7.72□□□□□ -1.17
VTI1A-208ENST00000494728 HIST1H2BAQ96A08 127 aa7.72□□□□□ -1.17
VTI1A-208ENST00000494728 PKHD1L1Q86WI1 4243 aa7.71□□□□□ -1.17
VTI1A-208ENST00000494728 A0A1B0GV50 99 aa7.71□□□□□ -1.18
VTI1A-208ENST00000494728 LTAP01374 205 aa7.71□□□□□ -1.18
VTI1A-208ENST00000494728 INAFM2P0DMQ5 153 aa7.71□□□□□ -1.18
VTI1A-208ENST00000494728 LAGE3Q14657 143 aa7.71□□□□□ -1.18
VTI1A-208ENST00000494728 ZNF674Q2M3X9 581 aa7.71□□□□□ -1.18
VTI1A-208ENST00000494728 PIK3CD-AS1Q5SR53 167 aa7.71□□□□□ -1.18
VTI1A-208ENST00000494728 FAM162BQ5T6X4 162 aa7.71□□□□□ -1.18
VTI1A-208ENST00000494728 OR11H4Q8NGC9 324 aa7.71□□□□□ -1.18
VTI1A-208ENST00000494728 FMC1Q96HJ9 113 aa7.71□□□□□ -1.18
VTI1A-208ENST00000494728 J3QL48 77 aa7.7□□□□□ -1.18
VTI1A-208ENST00000494728 UBE2G1P62253 170 aa7.7□□□□□ -1.18
VTI1A-208ENST00000494728 RPL19P84098 196 aaKnown RBP7.7□□□□□ -1.18
VTI1A-208ENST00000494728 LINC01559Q495D7 138 aa7.7□□□□□ -1.18
VTI1A-208ENST00000494728 NTN5Q8WTR8 489 aaPredicted RBP7.7□□□□□ -1.18
VTI1A-208ENST00000494728 FRZBQ92765 325 aa7.7□□□□□ -1.18
VTI1A-208ENST00000494728 TRBV6-1A0A0K0K1D8 114 aa7.69□□□□□ -1.18
VTI1A-208ENST00000494728 SCO2A0A1W2PP80 73 aa7.69□□□□□ -1.18
VTI1A-208ENST00000494728 M0R381 172 aa7.69□□□□□ -1.18
VTI1A-208ENST00000494728 PAGE4O60829 102 aa7.69□□□□□ -1.18
VTI1A-208ENST00000494728 CST9LP1Q5W188 147 aa7.69□□□□□ -1.18
VTI1A-208ENST00000494728 SFRP2Q96HF1 295 aa7.69□□□□□ -1.18
VTI1A-208ENST00000494728 TMEM70Q9BUB7 260 aa7.69□□□□□ -1.18
VTI1A-208ENST00000494728 NKX6-2Q9C056 277 aaPredicted RBP7.69□□□□□ -1.18
VTI1A-208ENST00000494728 ZFP30Q9Y2G7 519 aa7.69□□□□□ -1.18
VTI1A-208ENST00000494728 FAT3Q8TDW7 4589 aa7.68□□□□□ -1.18
VTI1A-208ENST00000494728 AKR1C3P42330 323 aa7.68□□□□□ -1.18
VTI1A-208ENST00000494728 LINC01620Q4KN68 170 aa7.68□□□□□ -1.18
VTI1A-208ENST00000494728 NIT1Q86X76 327 aa7.68□□□□□ -1.18
VTI1A-208ENST00000494728 KCNRGQ8N5I3 272 aa7.68□□□□□ -1.18
VTI1A-208ENST00000494728 SYT8Q8NBV8 401 aa7.68□□□□□ -1.18
VTI1A-208ENST00000494728 OR10AG1Q8NH19 301 aa7.68□□□□□ -1.18
VTI1A-208ENST00000494728 FAM213BQ8TBF2 198 aa7.68□□□□□ -1.18
VTI1A-208ENST00000494728 PHLDA3Q9Y5J5 127 aa7.68□□□□□ -1.18
VTI1A-208ENST00000494728 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.67□□□□□ -1.18
VTI1A-208ENST00000494728 RHODO00212 210 aa7.67□□□□□ -1.18
VTI1A-208ENST00000494728 TPT1P13693 172 aaKnown RBP7.67□□□□□ -1.18
VTI1A-208ENST00000494728 ZNF345Q14585 488 aa7.67□□□□□ -1.18
VTI1A-208ENST00000494728 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
VTI1A-208ENST00000494728 BAALCQ8WXS3 180 aa7.67□□□□□ -1.18
VTI1A-208ENST00000494728 MUC21A0A0G2JKD1 596 aa7.66□□□□□ -1.18
VTI1A-208ENST00000494728 MUC21A0A140T8X8 626 aa7.66□□□□□ -1.18
VTI1A-208ENST00000494728 LOC100996750A0A140TA64 210 aa7.66□□□□□ -1.18
VTI1A-208ENST00000494728 UBE2D3P61077 147 aa7.66□□□□□ -1.18
VTI1A-208ENST00000494728 UBE2D2P62837 147 aa7.66□□□□□ -1.18
VTI1A-208ENST00000494728 Q6ZSA8 131 aa7.66□□□□□ -1.18
VTI1A-208ENST00000494728 ZFP82Q8N141 532 aa7.66□□□□□ -1.18
VTI1A-208ENST00000494728 SFT2D1Q8WV19 159 aa7.66□□□□□ -1.18
VTI1A-208ENST00000494728 MBD3L1Q8WWY6 194 aa7.66□□□□□ -1.18
VTI1A-208ENST00000494728 TCEAL7Q9BRU2 100 aa7.66□□□□□ -1.18
VTI1A-208ENST00000494728 MLST8Q9BVC4 326 aa7.66□□□□□ -1.18
VTI1A-208ENST00000494728 KRTAP4-6Q9BYQ5 205 aa7.66□□□□□ -1.18
VTI1A-208ENST00000494728 hCG_2014768A0A024R1R8 64 aa7.65□□□□□ -1.18
VTI1A-208ENST00000494728 A0A087WWC5 75 aa7.65□□□□□ -1.18
VTI1A-208ENST00000494728 TRAV8-3A0A0A6YYJ7 113 aa7.65□□□□□ -1.18
VTI1A-208ENST00000494728 BCL2L11O43521 198 aa7.65□□□□□ -1.18
VTI1A-208ENST00000494728 STOML3Q8TAV4 291 aa7.65□□□□□ -1.18
VTI1A-208ENST00000494728 DERL1Q9BUN8 251 aa7.65□□□□□ -1.18
VTI1A-208ENST00000494728 TM2D2Q9BX73 214 aa7.65□□□□□ -1.18
VTI1A-208ENST00000494728 KLK12Q9UKR0 248 aa7.65□□□□□ -1.18
VTI1A-208ENST00000494728 SEC11BP0C7V7 166 aa7.64□□□□□ -1.19
VTI1A-208ENST00000494728 Q6ZNX1 250 aa7.64□□□□□ -1.19
VTI1A-208ENST00000494728 NEXN-AS1Q8NBZ9 246 aa7.64□□□□□ -1.19
VTI1A-208ENST00000494728 ZNF471Q9BX82 626 aaPredicted RBP7.64□□□□□ -1.19
VTI1A-208ENST00000494728 TRBV7-3A0A075B6L6 115 aa7.63□□□□□ -1.19
VTI1A-208ENST00000494728 IGKV2D-24A0A075B6R9 120 aa7.63□□□□□ -1.19
VTI1A-208ENST00000494728 TRBV10-1A0A0K0K1A3 114 aa7.63□□□□□ -1.19
VTI1A-208ENST00000494728 HMSDA8MTL9 139 aa7.63□□□□□ -1.19
VTI1A-208ENST00000494728 SNAI2O43623 268 aa7.63□□□□□ -1.19
VTI1A-208ENST00000494728 CCL20P78556 96 aa7.63□□□□□ -1.19
VTI1A-208ENST00000494728 PRR27Q6MZM9 219 aa7.63□□□□□ -1.19
VTI1A-208ENST00000494728 OR10G8Q8NGN5 311 aa7.63□□□□□ -1.19
VTI1A-208ENST00000494728 UBE2WQ96B02 151 aa7.63□□□□□ -1.19
VTI1A-208ENST00000494728 KANTRA0A1W2PQU2 76 aa7.62□□□□□ -1.19
VTI1A-208ENST00000494728 UMAD1C9J7I0 102 aa7.62□□□□□ -1.19
VTI1A-208ENST00000494728 PFDN1O60925 122 aa7.62□□□□□ -1.19
VTI1A-208ENST00000494728 C1QBP02746 253 aa7.62□□□□□ -1.19
VTI1A-208ENST00000494728 CXCL1P09341 107 aa7.62□□□□□ -1.19
VTI1A-208ENST00000494728 RPL36AP83881 106 aaKnown RBP7.62□□□□□ -1.19
VTI1A-208ENST00000494728 ZNF56Q15929 161 aa7.62□□□□□ -1.19
VTI1A-208ENST00000494728 MPV17L2Q567V2 206 aa7.62□□□□□ -1.19
VTI1A-208ENST00000494728 ATRAIDQ6UW56 229 aa7.62□□□□□ -1.19
VTI1A-208ENST00000494728 BAGE2Q86Y30 109 aa7.62□□□□□ -1.19
VTI1A-208ENST00000494728 RPL36ALQ969Q0 106 aaKnown RBP7.62□□□□□ -1.19
VTI1A-208ENST00000494728 SSBP4Q9BWG4 385 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-208ENST00000494728 TRBV6-8A0A0A6YYG3 113 aa7.61□□□□□ -1.19
VTI1A-208ENST00000494728 A0A0D9SG52 128 aa7.61□□□□□ -1.19
VTI1A-208ENST00000494728 FAM229AH3BQW9 127 aa7.61□□□□□ -1.19
VTI1A-208ENST00000494728 H2AFB1P0C5Y9 115 aa7.61□□□□□ -1.19
VTI1A-208ENST00000494728 GZMBP10144 247 aa7.61□□□□□ -1.19
VTI1A-208ENST00000494728 RPL35P42766 123 aaKnown RBP7.61□□□□□ -1.19
VTI1A-208ENST00000494728 SSTP61278 116 aa7.61□□□□□ -1.19
VTI1A-208ENST00000494728 TOR2AQ5JU69 321 aa7.61□□□□□ -1.19
VTI1A-208ENST00000494728 ENHOQ6UWT2 76 aa7.61□□□□□ -1.19
VTI1A-208ENST00000494728 NTM-AS1Q6ZSK4 140 aa7.61□□□□□ -1.19
VTI1A-208ENST00000494728 SCXQ7RTU7 201 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms